Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0433 ATGAAGATTCCAAAGACGATGACGATGGATGACAGTAGCAGCAATAATCCAAACTCTTCATCTTTTCTAATCCAAAACTCTGACCTAATTCTTCCATGGCTAACCCATCAACAACTCGCTAATCTCTCCTTAACTTGCAAATCTCTCCACAATCTCACCAAAACCATAACCCTAATTCGCATCTCCGATGCTTCTAGAACCTTCGAGAATTTCCCAATCCCATTCCACAACAACAATCACAATTTCCACAATCATACTTATTCTTACTTTCTCTACACACCTTCACTCATTCTCTCTCATAATCTCCCTCGTTATCAACCATGGGGATGGAAGGTTAGTTCTGTAATTTCACCAATTCCGGTTAAAACGGTCGATGAATCGGAATCAGTGAGTTTTGTTGATGTGGTTGGGTGTGAGTGTGGTGAGGTTTGTGATGATGATGATGGGTGTTTGTGTTTTGATGGTGGGGACAGTGATGTTGGAAGAGAGTGTGGGGTGGGTTGTTCTTGTGGGAGGGAGTGTGGGAACAGAGTGAGTCAAAATGGTGTTAGGGTTAGGGTTAAGATTGTTAGGTGTGAAGGGAAAGGGTGGGGTTTGTTTGCTGATCAAGTGATTGCCAAAGGAGAGTTTTTGTTTCAATATGCAGGTGAACTATTGACAACCAAGGAAGCACAGAGGAGACAACAATATTATGATGAACTGTCATCACGCGGTCGTTTCTCTGCCGCTCTTTTAGTTGTAAGAGAACATCTTCCATCTGGAAAGGCATGTTTGCGATTGAACATAGATGCAACAAAAATTGGAAACGTTGCACGGTTTGTAAATCATTCGTGTGATGGTGGTAATTTAAGCACAAAGCTAATTAGAAGTTCAGGATCTTTGTTCCCCCGCCTTTGCTTCTTTGCTTTGAAAGATATCCAAAAAGACGAAGAGCTTACTTTCAGCTATGGAGAAATCAGGAAAAGGTCCAACGGGTTGCCATGCTACTGCAACAGCCCTTCTTGCTTTGGAACATTGCCCTCTGAAGACACTTGA 1035 0.4232 MKIPKTMTMDDSSSNNPNSSSFLIQNSDLILPWLTHQQLANLSLTCKSLHNLTKTITLIRISDASRTFENFPIPFHNNNHNFHNHTYSYFLYTPSLILSHNLPRYQPWGWKVSSVISPIPVKTVDESESVSFVDVVGCECGEVCDDDDGCLCFDGGDSDVGRECGVGCSCGRECGNRVSQNGVRVRVKIVRCEGKGWGLFADQVIAKGEFLFQYAGELLTTKEAQRRQQYYDELSSRGRFSAALLVVREHLPSGKACLRLNIDATKIGNVARFVNHSCDGGNLSTKLIRSSGSLFPRLCFFALKDIQKDEELTFSYGEIRKRSNGLPCYCNSPSCFGTLPSEDT* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0433 344 SMART set_7 185 323 IPR001214 GO:0005515
Tpr5g0433 344 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 15 333 - -
Tpr5g0433 344 Gene3D SET domain 54 339 IPR046341 -
Tpr5g0433 344 ProSiteProfiles Post-SET domain profile. 324 340 IPR003616 -
Tpr5g0433 344 ProSiteProfiles SET domain profile. 185 317 IPR001214 GO:0005515
Tpr5g0433 344 Pfam SET domain 196 317 IPR001214 GO:0005515
Tpr5g0433 344 SUPERFAMILY SET domain 70 337 IPR046341 -
Tpr5g0433 344 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 15 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0433 Tpr-Chr5 6582290 6586745 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0433 163 339 C2H2 Transcription Factor Family AT2G23740 36.413 2.14e-26 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tpr5g0433 SET 2.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0433 K11433 - gmx:100786871 404.445