Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0410 ATGGGTGCTTGTTTTCGTAATAATTCTGGTGAGTTTATGGCTGGAATTACGCAGTGGCAGCAACTGACTTTATCAACAGAGGAGGGTGAAGCATGGGCACTTTTGCAAGCTATGAATGAAGCTAAGAGTAGAGAGGAAATTGTAAGTGAGGTTGTGCAAAACTATTACCAAAATGATGTAACTATTGTTGGTGCCTTGATTCGTTTGCACTATCATGATTGCATTTCCAATGGCTGTGACGCTTCGATTCTAATAGATTCAAAAGAAAATAGAAAATCAGAGAAAGAAGCAAGACCAAACCTAACACTTCGAGGATTTAACCTAATTGACGACATCAAGAGTGCCTTAGAACAACAATGCCCCGAAACCGTTTCGTGTGCGGATATCATAACAATGGCCACAAGGGAAGCAATTGCATTAGCAAATGGACCAAGATACCATGTCTTAACAGGAAGAAGAGATGGGTTAGTATCAAATGCCTTAAATGTGACCATTCCTGGAACATTACTTAATGTGCCACAAGCTCTAAAAAAATTTAACTCAAAAGGGTTAACATTAGAAGACATGGTGACCCTTATTGGAGCACACACTATTGGATTTTCTAAATGCAATTTTTTTCAAAATAGGCTATCAAGTTTTAGGTCAGGAAGAATTGACCCTACAATGGATCCTAATTTAAATGCTTATTTGGTTAAACAGTGTGGATCAATATTTAACCCTTCAGGGAATCATACTTCAGTGTTTTTGGATGTAGAAACACCTTTTGATTTTGACAATAAATTTTACAAACAAATTATTAATAAGAGAGGGATACTTAAAATTGATCAACAACTTGCTTTGGATCCTCTTTCTAGAAAATTGGTTAGGAATTTTGCAAGTGGTAATTTTAACTTTTGGGATAGATTTGGAGTTTCTTGGAATAAGCTTGGAAGAATTGATGTTTTGGTTGGTAATGAAGGTGAAATCAGAAGAAATTGCAGGGCTTTCAATAAAGATATTTGA 1002 0.3593 MGACFRNNSGEFMAGITQWQQLTLSTEEGEAWALLQAMNEAKSREEIVSEVVQNYYQNDVTIVGALIRLHYHDCISNGCDASILIDSKENRKSEKEARPNLTLRGFNLIDDIKSALEQQCPETVSCADIITMATREAIALANGPRYHVLTGRRDGLVSNALNVTIPGTLLNVPQALKKFNSKGLTLEDMVTLIGAHTIGFSKCNFFQNRLSSFRSGRIDPTMDPNLNAYLVKQCGSIFNPSGNHTSVFLDVETPFDFDNKFYKQIINKRGILKIDQQLALDPLSRKLVRNFASGNFNFWDRFGVSWNKLGRIDVLVGNEGEIRRNCRAFNKDI* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0410 333 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr5g0410 333 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr5g0410 333 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr5g0410 333 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr5g0410 333 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr5g0410 333 PANTHER PEROXIDASE 44-RELATED 43 328 - -
Tpr5g0410 333 Gene3D Peroxidase, domain 2 166 309 - -
Tpr5g0410 333 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr5g0410 333 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr5g0410 333 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr5g0410 333 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr5g0410 333 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr5g0410 333 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr5g0410 333 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr5g0410 333 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr5g0410 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Tpr5g0410 333 Gene3D - 42 330 - -
Tpr5g0410 333 Pfam Peroxidase 49 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr5g0410 333 PANTHER PEROXIDASE 25-RELATED 43 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr5g0410 333 SUPERFAMILY Heme-dependent peroxidases 43 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr5g0410 333 CDD secretory_peroxidase 45 329 IPR033905 GO:0004601|GO:0042744
Tpr5g0410 333 ProSiteProfiles Plant heme peroxidase family profile. 45 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0410 Tpr-Chr5 6311933 6322422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0410 45 330 Peroxidase AT5G17820 48.432 1.79e-91 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0410 K00430 - cpap:110807807 317.39