Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0408 ATGGATCCAAATCAAAAGAAAAATGCTGAGCTGGTCGACAAATTTTGGGAAGAACAATTCAAGAAAATTAGCGAGACTGCTGATTTGAAGTCTCATATTTGTACGTCCAGAGTTAAGAAGGTCATGAAAGAGGTGGCGGATGTGAAAATTCCGAATCAAACTTGTGTTTTCATGGCAAAAGTTTGTGAATTGTTCATTAAGGACATTACAATGAGATCTATGTTCAAAATGAAAGAAGCCGGAAGGACAAGCATTGAAATCAATGACGTGGTTGATACTTTAGGTGATATTGATTCGGAAACTAAAATTGAGGATGACAAAGCTGAAATTTCTGCAAATGAAGATGATTAA 351 0.3561 MDPNQKKNAELVDKFWEEQFKKISETADLKSHICTSRVKKVMKEVADVKIPNQTCVFMAKVCELFIKDITMRSMFKMKEAGRTSIEINDVVDTLGDIDSETKIEDDKAEISANEDD* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0408 116 SUPERFAMILY Histone-fold 33 97 IPR009072 GO:0046982
Tpr5g0408 116 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 36 90 IPR003958 -
Tpr5g0408 116 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA 6 93 IPR027170 GO:0003700|GO:0006355|GO:0016602
Tpr5g0408 116 Gene3D Histone, subunit A 2 101 IPR009072 GO:0046982
Tpr5g0408 116 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 6 93 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0408 15 91 CCAAT-HAP5 Transcription Factor Family AT1G54830 40.506 2.50e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0408 K08066 - aprc:113855583 68.9366