Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0405 ATGGAAGATCAACAACAAAAGCAACATGTTCAGTGTCAAAGTTCCAATACTAATAATCCAAACAACATTGAAAGGAGTGAAACTGTGAGATCAAGATGGACACCAAAACCTGAACAAATCCTTATACTTGAATCCATTTTCAATAGTGGAATGGTTAATCCACCAAAAGATGAAACCATTAGAATAAGAAAACTTCTTGAGAAATTTGGTTCTGTTGGTGATGCTAATGTTTTTTATTGGTTTCAAAATCGCCGATCTCGTTCTCGTCGCCGTCAAAGGCAGATGCAAGCCGCCGCTCAACTAAGCGGTGGCAGTGCAAATCCATACCACCAATACCACTGCAGCACCAATAGTGCTAACAGTTTGTCTCTTGGTGCTGCAATTGGTTTTGGTGGTTCGTCTAATTTCACTATGAATTCTTCATCTTGTAATTCATCATATAATAATAACTTTTCTGGTTCTTCTTCATCATGTGGTCTTGGAGTTGGTCTCGGCGTCCGTGTTGGTGGTGGCGGAGATGAAGGGTTTGGGGGTTTGTTCTTAGGTTCTACTCCAATTAATTTCTCTGAAACTGATCATACCTCAGCTGCTTCATCAGCTTTGTACCCTTCAAATCATGCTTCAAATTTCAACTTCCATTCAGGATTTGGGGGGAGCAATGTTTCAAGTTTGATCACAGTGCTCATCAATGGGGTTGCAACCGAAGTTCCAAGGGGTGCAATTGACATGAAATCAATGTTCGGTGAAAATGTTATGTTAGTTCATTCTTCTGGAGTCTTAGTTCCAACCAATGACTTTGGTTTCTTGATGCAGAGCCTGCAGAATGGTGAAAGCTACTATCTGGTTTCAAAGCAAACCCAAGCATGA 867 0.406 MEDQQQKQHVQCQSSNTNNPNNIERSETVRSRWTPKPEQILILESIFNSGMVNPPKDETIRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQMQAAAQLSGGSANPYHQYHCSTNSANSLSLGAAIGFGGSSNFTMNSSSCNSSYNNNFSGSSSSCGLGVGLGVRVGGGGDEGFGGLFLGSTPINFSETDHTSAASSALYPSNHASNFNFHSGFGGSNVSSLITVLINGVATEVPRGAIDMKSMFGENVMLVHSSGVLVPTNDFGFLMQSLQNGESYYLVSKQTQA* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0405 288 Gene3D - 30 97 - -
Tpr5g0405 288 ProSiteProfiles 'Homeobox' domain profile. 26 91 IPR001356 GO:0003677
Tpr5g0405 288 MobiDBLite consensus disorder prediction 1 32 - -
Tpr5g0405 288 MobiDBLite consensus disorder prediction 7 28 - -
Tpr5g0405 288 Pfam Homeodomain 30 90 IPR001356 GO:0003677
Tpr5g0405 288 SUPERFAMILY Homeodomain-like 24 98 IPR009057 -
Tpr5g0405 288 SMART HOX_1 28 95 IPR001356 GO:0003677
Tpr5g0405 288 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 285 - -
Tpr5g0405 288 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 285 IPR044558 GO:0003700|GO:0048830
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0405 Tpr-Chr5 6231990 6234590 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0405 26 286 Wox Gene Family AT5G17810 48.736 4.41e-68 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Tpr5g0405 Homeodomain 6.9e-13 CL0123