Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0393 ATGGATCATTACAAGGTTTTAGGTTTACACAAAACAGCTTCAAAAGAAGAAATCAAAGCAGCATTCAAAAAATTAGCGTTTCAATTTCATCCAGATAAGCATTCTCAATCACCGAAATCCGTTAAAGATAACGCTACACTTCAATTCAAGCAGGTTTCTGAAGCATACGAAGTTCTCATGGATGATCGTAAACGCGCCGATTACAATTACCGGTGGCGGTCCGGTGCCGGAAGACAAAGTGCCGGCGGTAACAGTGGTAACTATTATTACTCTCAATATAGTTATGGACATGGTAGAAGTGGGAGTGGTTATGAGTATAAAACTAGGTCTAATGGTGGTGGTTTTGCGTCGAAGTTTGAAGTTGTTATTCGGATTTTGACGGCGAAATCTTCACTTCTTAATCTTGGATTCGCAGCAGCTATATTAGGTGTGATGATTGTTGTTGATACAAGTGGAGAATCCTTATGGAAGATGCAAAATTCTGGGAAATCTTTTGAAGAAGCCATGAACACCATTGAGAAAACAAAATCGTATAAAGAAGATAACACGAATGAACGTCCTTGA 564 0.3901 MDHYKVLGLHKTASKEEIKAAFKKLAFQFHPDKHSQSPKSVKDNATLQFKQVSEAYEVLMDDRKRADYNYRWRSGAGRQSAGGNSGNYYYSQYSYGHGRSGSGYEYKTRSNGGGFASKFEVVIRILTAKSSLLNLGFAAAILGVMIVVDTSGESLWKMQNSGKSFEEAMNTIEKTKSYKEDNTNERP* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0393 187 ProSitePatterns Nt-dnaJ domain signature. 49 68 IPR018253 -
Tpr5g0393 187 Gene3D DnaJ domain 1 124 IPR036869 -
Tpr5g0393 187 CDD DnaJ 2 61 IPR001623 -
Tpr5g0393 187 Pfam DnaJ domain 2 69 IPR001623 -
Tpr5g0393 187 PANTHER CO-CHAPERONE PROTEIN DJLA 1 170 - -
Tpr5g0393 187 PANTHER CHAPERONE PROTEIN DNAJ 72 1 170 - -
Tpr5g0393 187 SUPERFAMILY Chaperone J-domain 1 94 IPR036869 -
Tpr5g0393 187 PRINTS DnaJ domain signature 4 22 IPR001623 -
Tpr5g0393 187 PRINTS DnaJ domain signature 22 37 IPR001623 -
Tpr5g0393 187 PRINTS DnaJ domain signature 44 64 IPR001623 -
Tpr5g0393 187 PRINTS DnaJ domain signature 64 83 IPR001623 -
Tpr5g0393 187 SMART dnaj_3 1 64 IPR001623 -
Tpr5g0393 187 ProSiteProfiles dnaJ domain profile. 2 72 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0393 Tpr-Chr5 6041993 6046578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0393 3 69 C2H2 Transcription Factor Family AT1G74250 43.284 3.84e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0393 - - lang:109336420 267.7