Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0385 ATGGTGTCTCAAGGTGGAACAGTTCAAGAGTCAAGGACTACACTTTTATCTAGGTCAGGATCTTTGTATAATCTAACCCTTGATGAAGTACAAAACCATCTTGGAAATTTAGGGAAGCCACTTGGAAGTATGAATCTTGATGAGTTGCTCAAGAGTGTGTGGAGTGTTGAAGCCGGTGAAGTTTTTGATTTCGGTAACGATGTTGCTGGTACTACCATGCAGCATAATCAACATGGTGAGATGAATCGACAGGGAAGTTTAACATTATCTGGAGATCTTAGAAAGAAAACTGTTGATGAGGTGTGGAGAGATATGCAAATTGAGAAGAAGAGGAGTGTTGATAGGGATCGGAAAGCACGTGACAGACAACAAACACTTGGTGAGATGACTTTGGAGGATTTCTTGGTGAAAGCTGGAGTTGTTGGTGAATCTTTTCATAATAAGGAAGGTGATTTGTTAAGGGTTGATTTGAATGAGGATTCTCGGCAAAACGTTTCCCAACACGGTCATCATTGGATGCAATTTCAGCTTCCTTCAGTGCAGCAGCAGCAGCAACAGCATCAACAAGAAAAACATATGATGCCGGGATTTGTGCCTGTTCATGCCATTCAACAGCCTTTTCAGGTTGCAGGGCAAGTTTTGGATGCGGCAATCTCACCGTCTTCTTTAATGGGTACATTATCAGATACACAAACACTAGGTCGTAAAAGGGTTGCCTCTGGTATAGTCGTAGAGAAAACTGTGGAGAGGAGGCAAAAGAGGATGATTAAAAATAGGGAATCTGCTGCTCGGTCACGAGCAAGAAGACAGGCTTACACGCAAGAACTGGAACTTAAAGTTTCGCGTTTGGAAGAGGAAAATGAAAGGCTTAGGAAACAGAATGAGACAGAGAAAGAGGTTCCATGTGCGCCGCCACCCGAGCCTAAGAATCAACTCCGCAGAACTAATTCGGCATCCTTTTGA 963 0.4309 MVSQGGTVQESRTTLLSRSGSLYNLTLDEVQNHLGNLGKPLGSMNLDELLKSVWSVEAGEVFDFGNDVAGTTMQHNQHGEMNRQGSLTLSGDLRKKTVDEVWRDMQIEKKRSVDRDRKARDRQQTLGEMTLEDFLVKAGVVGESFHNKEGDLLRVDLNEDSRQNVSQHGHHWMQFQLPSVQQQQQQHQQEKHMMPGFVPVHAIQQPFQVAGQVLDAAISPSSLMGTLSDTQTLGRKRVASGIVVEKTVERRQKRMIKNRESAARSRARRQAYTQELELKVSRLEEENERLRKQNETEKEVPCAPPPEPKNQLRRTNSASF* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0385 320 SUPERFAMILY Leucine zipper domain 250 296 IPR046347 GO:0003700|GO:0006355
Tpr5g0385 320 MobiDBLite consensus disorder prediction 281 298 - -
Tpr5g0385 320 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 253 268 IPR004827 GO:0003700|GO:0006355
Tpr5g0385 320 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 318 IPR043452 GO:0003700|GO:0045893
Tpr5g0385 320 Gene3D - 248 302 - -
Tpr5g0385 320 SMART brlzneu 246 318 IPR004827 GO:0003700|GO:0006355
Tpr5g0385 320 Coils Coil 269 300 - -
Tpr5g0385 320 MobiDBLite consensus disorder prediction 281 320 - -
Tpr5g0385 320 Pfam bZIP transcription factor 250 298 IPR004827 GO:0003700|GO:0006355
Tpr5g0385 320 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 248 293 IPR004827 GO:0003700|GO:0006355
Tpr5g0385 320 PANTHER BZIP TRANSCRIPTION FACTOR 2 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0385 Tpr-Chr5 5901788 5905618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0385 1 320 bZIP Transcription Factor Family AT3G56850 57.231 1.65e-105 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr5g0385 bZIP_1 2.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0385 K14432 - gmx:100170741 352.058