Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0376 ATGTTCATCCCCATACCCAGATTCCGGCGAGCAACCACCGTCGCCGGAAAGTCCAATCACTTCCATCTCTTTTTTCCCTCAACCGTTCTTAATATCTCCCTGCCCTCATCATCTCGTCCTTCACCACCGCATCCACCACAACCTCCACCGCCACCTACAAATCAATCTCCGAATCAGAACGTCCTATCCGCTTCCGGTGATGCCGCCGTCATCAGAATCACGTTATTCTTCCTCTCAGGTCTGAATTGTGCAGAGGCAGTCAATTTTGCTCCAGCTGACTGGCTACCACACGGTTCATTTGGAGCTGATCTCTATAAGCAGTTTCACAAAACAGGTGTCTTGTCTCATGAGGAGCTTCTTTGTGTAGTAGCCCAGGGTTGGAGAAGTGAGATGCAGAGGAACTGGATTGGTTGTCCAACAATGATACTTAGTTCTAAGGATCCGAGACTGTATCTTCACTTGGCGCCGGAATTTGCTCACTACAAGGGAAATCACACTTATGTGCATGCGACAAGAAAAGGATATTGGCAGTTTGATATGGGAGATGTAATTATTGATGGTAAATCCACCGGATATATTGTGTTGATGGCTGTGCGGCCATTGCTGACTCGGGGACTTATTTGTTGGCGGTTCGAATGGTATGAATAA 648 0.4738 MFIPIPRFRRATTVAGKSNHFHLFFPSTVLNISLPSSSRPSPPHPPQPPPPPTNQSPNQNVLSASGDAAVIRITLFFLSGLNCAEAVNFAPADWLPHGSFGADLYKQFHKTGVLSHEELLCVVAQGWRSEMQRNWIGCPTMILSSKDPRLYLHLAPEFAHYKGNHTYVHATRKGYWQFDMGDVIIDGKSTGYIVLMAVRPLLTRGLICWRFEWYE* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0376 215 Gene3D Cupin 72 134 - -
Tpr5g0376 215 PANTHER LYSINE-SPECIFIC DEMETHYLASE LID 76 130 - -
Tpr5g0376 215 Pfam Eukaryotic aspartyl protease 159 190 IPR033121 -
Tpr5g0376 215 PANTHER LYSINE-SPECIFIC DEMETHYLASE 76 130 - -
Tpr5g0376 215 MobiDBLite consensus disorder prediction 38 56 - -
Tpr5g0376 215 MobiDBLite consensus disorder prediction 35 61 - -
Tpr5g0376 215 Gene3D Acid Proteases 159 192 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0376 Tpr-Chr5 5771981 5778587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0376 77 135 JUMONJI Transcription Factor Family AT1G08620 47.458 2.48e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0376 K11446 - gmx:100819576 95.9005