Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0373 ATGTTCATGCTTCAATACAGTAATATTGTAGAATTTGTAGCCATCTCCATCCTCTTCTTCTTATACATTCACTATTGGAGACGCAATAGGGGTAAAATTGTTCCGAGTTGGCCAATAATTGGTATGGTACTTACGATTCTGCGTTATGTGCCCGATTTTCATAATTTTACGACGTTAGTTTTGAAACGTCATGGAGGAACTTTTCAATTTGAAGGTCCCTGGTTCACAAACACAAGTTTTACCGGTACCTCTGATCCAAAGAACATCGATCACGTTACAAACAAGAATTTTGGAAACTACGGGAAAGGATCTAACTTCAAAGAAATTCTTGATGTTCTTGGAGGTAGTATTTTAAATTTGGATTTCCATGAATGGAAACTAGAGAGAACAGTGAATCAATTAATTTTCAAAAGGAAAAATTTCCAGAACTTCTTTCACCGATCTGTTCAGAAGAAGGTGGAGAACTACCTACTACCATTTCTTAACGATGTATCCGAAGCCGGAGCTCAGGTGGACTTGCAAGATGTCTTGAATAGGTTCACCTTTGACATAACCTGCACCATTGCATATGGATTTGATCCTAATTGTCTTCCAAACAAGTTTAGTAAGCTTAGAGAAATTGCTTCTCTAAAATCTCTTCCTGTGATGGAGGAAGTAATATTTTACAGACACTTCATTCCAATTTATTTACGGAAGCTGCAGAAATGGCTCAATGTTGGACAAGAGAAGAAATTCAAGGTTGCCCAAGAAAATATCGACCGGTTTTTGTACGAATGTATGAGTACATATTCCAGCAGATGCGGTGAAGAATTTGACGTATGTTATTTCGACTTGGTAAAAGAACTGACGAAAGAAGGTTATGGAAGAGGGGAAATGAGTGAGACGTATGTAAGAGACACAGGATTCTCTCTTCTGATAGCAGGAAATGGCACAATTAGTTCAGGTCTCAGTTGGTTTTTTTGGCTTGTGTCAATTCATCCCGTTGTACAAGCCAAAATTATTGACGAGATCAACGAGAATTGTCACACTCAATATGAGAATTGTATTGCTTCGAGGGAAGAGGATCTTGACAAGCTAGTTTATCTCCATGCTGCATTATGCGAAGCATTGAGGCTTTATCCTCCAATACCTTTTGAGCATATTTGTTCCGTCAAATCCGATATACTACCTAGCGGAGACCATGTTAGTGAAAATACAAAGTTAATGTACTCTATGTATGCTATGGGAAGGATGGAACAAATATGGGGAGAAGATTGCATGGAATTTAAGCCTGAGAGATGGATATCAAATAAAGGATACATTATACATGTTCCATCTTTCAAGTTTTTAACTTTCAATACAGGTCCTAGAAGTTGTTTGGGTAAAGATCTTAGCTTTGTTCAAATGAAGATGGTTGCAGCTACTATATTATGGAAGTTTCAAATTAAGGTAGTGGAAGGTCACCCTGTAATGCCAAGAATTTCTATTATTCTTCGTATGAAACATGGCTTGAAGGTTGAGGTCACTAAAAGATGCATTTGA 1521 0.3754 MFMLQYSNIVEFVAISILFFLYIHYWRRNRGKIVPSWPIIGMVLTILRYVPDFHNFTTLVLKRHGGTFQFEGPWFTNTSFTGTSDPKNIDHVTNKNFGNYGKGSNFKEILDVLGGSILNLDFHEWKLERTVNQLIFKRKNFQNFFHRSVQKKVENYLLPFLNDVSEAGAQVDLQDVLNRFTFDITCTIAYGFDPNCLPNKFSKLREIASLKSLPVMEEVIFYRHFIPIYLRKLQKWLNVGQEKKFKVAQENIDRFLYECMSTYSSRCGEEFDVCYFDLVKELTKEGYGRGEMSETYVRDTGFSLLIAGNGTISSGLSWFFWLVSIHPVVQAKIIDEINENCHTQYENCIASREEDLDKLVYLHAALCEALRLYPPIPFEHICSVKSDILPSGDHVSENTKLMYSMYAMGRMEQIWGEDCMEFKPERWISNKGYIIHVPSFKFLTFNTGPRSCLGKDLSFVQMKMVAATILWKFQIKVVEGHPVMPRISIILRMKHGLKVEVTKRCI* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0373 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Tpr5g0373 506 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0373 506 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0373 506 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0373 506 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0373 506 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0373 506 Gene3D Cytochrome P450 19 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0373 506 SUPERFAMILY Cytochrome P450 23 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0373 506 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0373 506 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0373 506 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0373 506 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0373 506 PANTHER CYTOCHROME P450 FAMILY PROTEIN 20 501 - -
Tpr5g0373 506 Pfam Cytochrome P450 35 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0373 506 PANTHER CYTOCHROME P450 20 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0373 Tpr-Chr5 5702929 5704877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0373 13 504 Cytochrome P450 AT2G23180 41.815 4.69e-142 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0373 - - mtr:MTR_1g035760 675.626