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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Tpr5g0356
ATGAAGTGGGGTCAGGTTAAGACACTTGAGGGACAAGGAGTGCCTTTAAATCAAGCTGAAGTGCAGAACTCACAGGACCTCCAAATAATATTCGGCACCGGCCCTGACATCGGACAAAGTCAGGGTAATATTCAAATAGATTATAAGCTGAGGCAAGCGGAGAATAACAAGGTGACTATTAATGTTAACCCAAATGGTAGTGGTGATTTCATGACCATTACTGAAGCTATCAACAGCATTCCAGCACCCAACAGCAGAAGAGTAGTTGTTTTCATTGCGCCCGGTCTTTACAGGGAGAAAATTGTGATCCCTCGAGATTTGGATTTCATAACATTCTTAGGGGATGCAACGAAGAAACCAATTATTACCGGAAATGATAGATCATCTACCATTGGAAGTGATGGCGAACCATTGGCGACGTTCAAGAGTGCAACAGTTGCAGTAGATGCAGACTATTTCATAGCTATCAACATTGTATTTGAGAACACTGCATCACCACGTATTGGATCGAAGGATGATCAAGCTGTTGCTCTTCGCGTCTCTGGAAACAAATGTGCTTTTTACAATAGCGACTTCTATGGATTTCAAGACACGTTGTACGATCATAAAGGCCTCCACTACTTCAAAGGTTGCAAAATTCAAGGCACCATTGATTTTATCTTTGGAAATGGGAGGTCCCTTTACCAGGGCTGCACTATAAATTCCATAGCGCAAAATGTAGGCTTTATCACAGCTCAAAAGCGCTCAAGTTTGACAACTGATGATAGTGGATTTTCAATATTAAATAGCAAAGTAATAGGGAGTGGTCAAGTTTATTTGGGAAGACCATGGGGAGATTACTCGAGAGTAATTTTCTCTTATACCTACATGGACAATCTTGTTCTCCCTCAAGGATGGGTTGACACTATGGACGACGGTGACCACCACTTGAGCGTATTCTACGCAGAATATAAGTGTACTGGACCTGGATCCAATTTTGCTGGAAGACTTCCATGGATACAGAGATTGTCAGACAAAGATGCCCAAGAATTTATCGGGGTCCATTTCATTTATGGGGAGACTTGGCTCATTACCAGTGGTGGTGCTCGGACCCTGGTCCAAGGGAATAGAGTGAGTGGAAATGATGAAGAAAAAGAAGAAGGATTTGGAACCACATTGCAAGATTACAAATGCTCAAAATTAGGCATGACAACAGAACATGCGGGTACTCGCCTGAACCCACCCTGA
1227
0.4271
MKWGQVKTLEGQGVPLNQAEVQNSQDLQIIFGTGPDIGQSQGNIQIDYKLRQAENNKVTINVNPNGSGDFMTITEAINSIPAPNSRRVVVFIAPGLYREKIVIPRDLDFITFLGDATKKPIITGNDRSSTIGSDGEPLATFKSATVAVDADYFIAINIVFENTASPRIGSKDDQAVALRVSGNKCAFYNSDFYGFQDTLYDHKGLHYFKGCKIQGTIDFIFGNGRSLYQGCTINSIAQNVGFITAQKRSSLTTDDSGFSILNSKVIGSGQVYLGRPWGDYSRVIFSYTYMDNLVLPQGWVDTMDDGDHHLSVFYAEYKCTGPGSNFAGRLPWIQRLSDKDAQEFIGVHFIYGETWLITSGGARTLVQGNRVSGNDEEKEEGFGTTLQDYKCSKLGMTTEHAGTRLNPP*
409
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Tpr5g0356
408
Pfam
Pectinesterase
60
352
IPR000070
GO:0030599|GO:0042545
Tpr5g0356
408
Gene3D
-
53
362
IPR012334
-
Tpr5g0356
408
SUPERFAMILY
Pectin lyase-like
57
356
IPR011050
-
Tpr5g0356
408
PANTHER
PECTINESTERASE
44
357
-
-
Tpr5g0356
408
PANTHER
ACYL-COA THIOESTER HYDROLASE YBHC-RELATED
44
357
-
-
Tpr5g0356
408
ProSitePatterns
Pectinesterase signature 2.
213
222
IPR033131
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Tpr5g0356
Tpr-Chr5
5385779
5396528
Dispersed/Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Tpr5g0356
34
357
Carbohydrate Esterase
AT1G69940
42.331
1.76e-84
260
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Tpr5g0356
K01051
-
pvy:116132618
408.297
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