Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0339 ATGAGGTACTTTTATTTTCATTTTTTGGTTCTTTCATGGTGTTTGTTATTAATCTCAAATACTCATGAGCTGGAACAAGATCAAACACAAGCTTTGTTAGAATTAAGAACTTATTTAGAACACCCTACCTCATTACAAACTATGGAAAATTACATTAATGACCTTTGCTACCTTCCTTTATCTTCAAATTTTAGCATTAAATGTGAAGCTAATTCAATAATTGAGCTCAAAGTTTTTGGTGACAAATCTATGAAACCATTAAGTTTCAATGGATTTGCAATTCCAAATCAAACACTATCCAAAAATTTCTCAATTGATTCATTTTTCACCACATTGACAAAGATGAAAACCCTAAAAGTTCTAACTTTGGTTTCATTAGGGATTTGGGGGAAACTTCCTAATCAAATTCATTCTCTCACTTTACTTCATGTTTTGGATTTAAGCTCAAATTTCCTATTTGGTACCATTCCACCAAAAATTTCAACAATGGTAAAGCTTCAATCATTAACACTTGATGAAAATTATTTCAACACAACTATGCCTAATTGGTTTGATTCTTTGTTTAATCTAAGTATCTTGAGTTTGAAGAAAAATCACTTAAAGGGTTCATTTCCATTTTCACTATGCAAAATAAAAAAACTTGAAGTTATTTCTTTGTCACAAAATCAACTCTCTGGTGAATTACATTCTCTCCATACTCTCAATGGTTTACATGTTTTGGATTTGAGAGAAAATCGTTTCGAATTTGAGCTACCGGTTCTGCCAAAATTCGTGGTCACGGTTTTGTTAAGCAATAACTCGTTCTCCGGAGAGATACCGAAGAAGTTCGGCGAATTGAATCATCTTCAACATTTAGATCTTTCGTCAAATCGTCTTAAGGGCACACCGCCGTCAACATTGTTCTCTTTGTCAAACTTAAGTTACTTGAATCTAGCTAACAATGTGCTAAGTGGAGAATTTTTGGATAAACTTCATTGCGGCGGAAAACTTGGTTATGTTGATATTTCTAGCAACAAGTTAAGTGGTTTACTTCCTTCTTGTTTGGTGAATAGTTCTAATGGTAGAGTTGTTAGATATGCTAGAAATTGTTTATCTTTCGAGTATAAGAATCAGCAGAGAGGTTCTTATTGTAAGGAATCAGGTTTAAGATGGAAGAAATTAAAGGAATGGGAAGTGATTGCATTAGGGGCTATGATTGTTGGATTTGTTCTTGTGGTTTTGGTGTTTGGAGTTTTGTTATGTAAAAAATGCGATTTGAGAAAGAAAAGTAGGCATAATCTGTTGCCAAATTTTGTTCAAGATAAGTCCACAGCCGGTGTTTCGTCAGAAGTTCTTGCAAATGCAAGATTTATTTCACACGCAGTGAAGCTAGGTACACAAACTACTCCAACCTGTCGACAATTTTCGATTCAAGAGTTGAAGGAAGCCACCAAAAACTTTAGTTTGTCAACTTGTATTGGTGATGGCTCCATAGGGAAGCTATATAAAGGTAAACTAGAGAATGAATGTTACGTGACGATAAGAACTTTTGTTCTGTCAAAGAAATGTTCAATTCAAAATCTTAAAGCTAAGTTGGATTTACTCTCAAAGCTTCAACATCCAAATTTGGTTAGTCTTTTGGGTCATTGCATTGATGGTGGTGTACAAGATGATTCAAGCACCCAAAAACTTCATCTTGTATATGAATATGTGCCAAATGGTGATTATCATACTCATCTATCAGAATATTCTGCAGAGAAAGCACTTAAATGGCCTGATAGACTGGCGATTTTGATCGGAGTTGCGAAGGCAGTTCATTTCTTACATACTGGTGTTATACCAGGATGTTTTAGCAACCAATTAAAGACAAAGAGTGTGTTACTTGATGAACACTGTATTCCAAAACTAAGTGACTATGGTATGTCCATCATCAAAGAAGATATTGAAAACTTTGAGACAAAGGGTGAGAAGAAATCAAAATCATGTCAAAGGACAAAAATGGATAATGATGTTTACAATTTTGGATTCATAATGTTGGAATCACTTGTTGGACCCATAACATGTGACAAAGGTGAAACATTTTTCCTAAATGAAAAGGCATCTTTTGGAAGTCAAGATGGAAGAAGAAAGATTGTGGATCCAATAGTGTTGACAACTTGTTCTCAAGAGTCATTATCAATTGCAATATCTATAACAACTAAATGTATATCTCAAGATTCTTCATCTCTTCCTTCTTTTGAAGATGTTTTATGGAACTTACAATATGCAGCTCAAGTTCAAGCCACAGCAGATGCAGATCAAAAATCAGATTAA 2292 0.3403 MRYFYFHFLVLSWCLLLISNTHELEQDQTQALLELRTYLEHPTSLQTMENYINDLCYLPLSSNFSIKCEANSIIELKVFGDKSMKPLSFNGFAIPNQTLSKNFSIDSFFTTLTKMKTLKVLTLVSLGIWGKLPNQIHSLTLLHVLDLSSNFLFGTIPPKISTMVKLQSLTLDENYFNTTMPNWFDSLFNLSILSLKKNHLKGSFPFSLCKIKKLEVISLSQNQLSGELHSLHTLNGLHVLDLRENRFEFELPVLPKFVVTVLLSNNSFSGEIPKKFGELNHLQHLDLSSNRLKGTPPSTLFSLSNLSYLNLANNVLSGEFLDKLHCGGKLGYVDISSNKLSGLLPSCLVNSSNGRVVRYARNCLSFEYKNQQRGSYCKESGLRWKKLKEWEVIALGAMIVGFVLVVLVFGVLLCKKCDLRKKSRHNLLPNFVQDKSTAGVSSEVLANARFISHAVKLGTQTTPTCRQFSIQELKEATKNFSLSTCIGDGSIGKLYKGKLENECYVTIRTFVLSKKCSIQNLKAKLDLLSKLQHPNLVSLLGHCIDGGVQDDSSTQKLHLVYEYVPNGDYHTHLSEYSAEKALKWPDRLAILIGVAKAVHFLHTGVIPGCFSNQLKTKSVLLDEHCIPKLSDYGMSIIKEDIENFETKGEKKSKSCQRTKMDNDVYNFGFIMLESLVGPITCDKGETFFLNEKASFGSQDGRRKIVDPIVLTTCSQESLSIAISITTKCISQDSSSLPSFEDVLWNLQYAAQVQATADADQKSD* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0339 763 PANTHER OS07G0166700 PROTEIN 2 763 IPR045272 GO:0004714|GO:0006468
Tpr5g0339 763 Gene3D Transferase(Phosphotransferase) domain 1 564 763 - -
Tpr5g0339 763 PRINTS Leucine-rich repeat signature 282 295 - -
Tpr5g0339 763 PRINTS Leucine-rich repeat signature 303 316 - -
Tpr5g0339 763 SUPERFAMILY Protein kinase-like (PK-like) 461 746 IPR011009 -
Tpr5g0339 763 Gene3D Ribonuclease Inhibitor 258 386 IPR032675 -
Tpr5g0339 763 SUPERFAMILY L domain-like 88 368 - -
Tpr5g0339 763 ProSiteProfiles Leucine-rich repeat profile. 281 302 IPR001611 GO:0005515
Tpr5g0339 763 PANTHER INACTIVE LRR RECEPTOR-LIKE KINASE 2 763 - -
Tpr5g0339 763 Gene3D Ribonuclease Inhibitor 25 257 IPR032675 -
Tpr5g0339 763 Pfam Leucine rich repeat 260 316 IPR001611 GO:0005515
Tpr5g0339 763 ProSiteProfiles Protein kinase domain profile. 480 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0339 763 Gene3D Phosphorylase Kinase; domain 1 453 563 - -
Tpr5g0339 763 Pfam Protein tyrosine and serine/threonine kinase 482 673 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0339 Tpr-Chr5 5129108 5134932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0339 8 691 Miscellaneous Gene Families AT5G14210 53.458 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Tpr5g0339 PK_Tyr_Ser-Thr 1.2e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0339 - - gmx:100799183 1079.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0339 5 5129108 5134932 Tpr5g0339 5 5129108 5134932 ECH