Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0327 ATGGTTGTTGATCCCTCTTTTCCTCAAACATCCAAACGAAGAAGAATCACCAACGTTTATTCCATGGCAACAATTGCAGAGATGCATGAAAAATTTGGGCGAGAGATTCGTGTGTTTGAAACATTATCACTTTCTGCATCACCAAATGCTGCAGAAAACAAAGAAGAGGAGCCTGAAGAGTTCTACGAGTTCACAGCTGAAGATTATTACAAAATTTTGGCTACTAAAAAGGATGATAAATATCTGAAGACTCGAAAACTCCGAGAAGCAGATTTGGCGGCTCGCAGGTCAAGAATGACCAAGGCTGTAATTAGAGTTCGCTTCCCTGATAATCACACATTGGAAGCTAACTTTCAACCTTCAGACACTATCCAGAGTTTAATTGATCTCCTCAATAAAGTGATTGCACAACCAGAAAAGCCATTTTACTTATATACTACTCCGCCAAAGAAGCTGATCAGAGACGTATCTCAGGATTTCTATGCTGCTGGATTTTGTCCTGGAGCCATTGTGTACTTTTCTTATGATGTTTCAAAAGGTGATGGAAGCGATGATGGCCCATACCTACTAGAAGAGGTGTTATCTTTGAAGAGTGCTAATGATCAAGGTCAACCGTCTGAGCCATTACAGTCCGCGCCAGTGTCTGCTGAGCCTGTCGTGCAAGCTCCTCCTGTTGAAGAACGAAAACCGGCCGAGAAAAAGATTGTTAAGCCAAAGTGGTTGAAAATGTAA 732 0.4167 MVVDPSFPQTSKRRRITNVYSMATIAEMHEKFGREIRVFETLSLSASPNAAENKEEEPEEFYEFTAEDYYKILATKKDDKYLKTRKLREADLAARRSRMTKAVIRVRFPDNHTLEANFQPSDTIQSLIDLLNKVIAQPEKPFYLYTTPPKKLIRDVSQDFYAAGFCPGAIVYFSYDVSKGDGSDDGPYLLEEVLSLKSANDQGQPSEPLQSAPVSAEPVVQAPPVEERKPAEKKIVKPKWLKM* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0327 243 CDD UBX2_UBXN9 102 175 - -
Tpr5g0327 243 Pfam UBX domain 100 156 IPR001012 GO:0005515
Tpr5g0327 243 Gene3D - 36 172 - -
Tpr5g0327 243 SUPERFAMILY Ubiquitin-like 80 173 IPR029071 -
Tpr5g0327 243 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1-RELATED 10 243 - -
Tpr5g0327 243 MobiDBLite consensus disorder prediction 197 243 - -
Tpr5g0327 243 MobiDBLite consensus disorder prediction 197 211 - -
Tpr5g0327 243 ProSiteProfiles UBX domain profile. 97 173 IPR001012 GO:0005515
Tpr5g0327 243 MobiDBLite consensus disorder prediction 226 243 - -
Tpr5g0327 243 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 10 243 IPR044232 GO:0032984|GO:0051117
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0327 12 120 C2H2 Transcription Factor Family AT2G01650 33.043 3.97e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0327 K15627 - gmx:100818386 313.153