Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0322 ATGTCGACATATAGTGAAGAAATGTTGCATCTCGATAGTGATATAGAAGGCGAAGAATTCACCAGTGGCGATGGCGTTGGTACTGATAGAGACGACTTGGGGAAAGAGAATTGTAAAGGTCAGAAATGCTTAAGTGAAATTATAGTTGATGATATAAGAGCTATGGAATTTAGCACAGAGCAAGAAGCTATAGACTTTTATGAAGCGTATGCACGTTCCCAAGGGTTTGCCATAAGGAAGGATGATGTGAAATATAATGATGAGAATGAAATTGTTTCGCGTCGATTACTTTGCAATAAAGCGGGTAAGAGTGAAAGGAAAAATAGGAAGAATGAGGATAGACATAGGCCAACTATGAGAATTGGCTGTCTTGCTAGACTTCGAGTGGCTTATGATATGATTCGTAAGATTTGGAAGGTTACTATGTTTCAGCCCTTTCACAACCACGACTTAACTCCCGCAAATTTTGTTCACTTGATTCCTAATTATCGTAAGTTGAGTGAAGCAGATAAACAGGTTGTCAATGGTTTGCATTCACAAGGTGTTAGAACATGTCATATATTGGGTTTTTTGATGGATCAGAAAGGAGGTCATGAAGATCTTGGATTTATCAAAAAGGACTTGTATAACTACACAGATCATCAAGGAAGGGTTAGAATTGAAGACGAGGATACTTTCGCTACTTTGAGTTATTTTCAAGGTAAAGCTGATGGTGATTCAAACTTCTTTTCAGAGTTCACCTTTACAGATGATGGGCGGTTAGAAAATATTTTTTGGGCAGATTCTACCAGCAAGCTTGATTATGAATGCTTTGGTGATGTGGTTGCATTTGACACCACATATAAAAAGAACAGATATGGCAAGCCACTTGTAATTTTTAGTGGATACAACCACCATGGAGAAACAACCATTTTTGTATGTGCTTTAATTTGCGATGAGACAGCAGAAACATATAAGTGGGTTTTAAATATGTTTTCAAAGGCTATGTATAATAAATACCCAAAAGCAGTTGTTACATATGCGGATAAAGCAATGAGGGAAGCTATTAGAGTTAAAAGTTTGAGTCTGAGTGGCAGAGGGTTGTTGAGACTTATGGTGTATCAAAGGATAAGTGGATCCTCAAAACATATAAATTGA 1137 0.372 MSTYSEEMLHLDSDIEGEEFTSGDGVGTDRDDLGKENCKGQKCLSEIIVDDIRAMEFSTEQEAIDFYEAYARSQGFAIRKDDVKYNDENEIVSRRLLCNKAGKSERKNRKNEDRHRPTMRIGCLARLRVAYDMIRKIWKVTMFQPFHNHDLTPANFVHLIPNYRKLSEADKQVVNGLHSQGVRTCHILGFLMDQKGGHEDLGFIKKDLYNYTDHQGRVRIEDEDTFATLSYFQGKADGDSNFFSEFTFTDDGRLENIFWADSTSKLDYECFGDVVAFDTTYKKNRYGKPLVIFSGYNHHGETTIFVCALICDETAETYKWVLNMFSKAMYNKYPKAVVTYADKAMREAIRVKSLSLSGRGLLRLMVYQRISGSSKHIN* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0322 378 Pfam MULE transposase domain 274 350 IPR018289 -
Tpr5g0322 378 Pfam FAR1 DNA-binding domain 65 152 IPR004330 -
Tpr5g0322 378 MobiDBLite consensus disorder prediction 13 32 - -
Tpr5g0322 378 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 51 351 IPR031052 GO:0006355
Tpr5g0322 378 PANTHER OS02G0262500 PROTEIN 51 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0322 Tpr-Chr5 4919781 4921041 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr5g0322 FAR1 9.6e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0322 - - ccaj:109792835 362.844