Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0313 ATGAACGAATTTGCAGAGACTCACAAACGCGATGCTGATTCAGAAAACAAGGAGGAAATTGCTGCATCGAAGAAGTTAAGGGTTGAATCTTCGGAAGAAAATGCTTCAAAGGAACTATCTTTCCTCATTGAAGCGGATGCTGCTGAAGATAAAGGGTTGAGACATTCCATGGAAGATGAATGGGTTGTTCTTCTTGATGCAGCTCGAGATTTCCCTGGAAATTTGAGATGTGCTCACTTTGCAATTTATGATGGACACGGGGGCCGGTTAGCTGCAGAGTATGCTCAAAAACATTTGCATGGAAATGTTCTCGCAGCAGGATTACCACGTGAGTTGTTGGATGTAAAGACTGCTAAAAGATCTATACTTGATGGTTTTCGAAAAACTGATGAGTCTCTTCTTCGAGAAAGTGCTGAAGGGGGGTGGCAGGACGGTGCTACAGCTGTATGTGTCTGGGTATTGGGACAAAAAGTTTTTGTCGCAAATGTAGGAGATGCCAAAGCAGTTTTAGCTCGGGCAACTTTATCTGATGGATCCCAAGATAACTCAGATGGAGTACCTGCTCTCAAAGCCATTGTTTTGACTAGAGAACACAAACCTATATTCCCGCAGGAGCGAGCACGCATTCAGAAGGCTGGTGGTGTTGTGAGCTCAAATGGACGATTACAAGGGCGTCTAGAAGTATCTAGGGCTTTCGGAGATCGCCAGTTCAAAAAGGTGGGTCTTGTTGCAACTCCAGATATCCATTCTTTTGACCTTACTGATAGAGATCATTTCATCATTCTTGGTTGTGATGGATTGTGGGGGGTGTTCGGACCCAGTGATGCTGTTGATTTTGTTCAGAAGTTATTGAATGAGGGACTGCCTGTAACAACTGTGAGCCGCCGTCTTGTAAGGGAAGCTGTTCGTGAACGTCGCTGCAAAGATAATTGCACTGCAATTATCATTGCATTCAAGCGTAATTAA 966 0.442 MNEFAETHKRDADSENKEEIAASKKLRVESSEENASKELSFLIEADAAEDKGLRHSMEDEWVVLLDAARDFPGNLRCAHFAIYDGHGGRLAAEYAQKHLHGNVLAAGLPRELLDVKTAKRSILDGFRKTDESLLRESAEGGWQDGATAVCVWVLGQKVFVANVGDAKAVLARATLSDGSQDNSDGVPALKAIVLTREHKPIFPQERARIQKAGGVVSSNGRLQGRLEVSRAFGDRQFKKVGLVATPDIHSFDLTDRDHFIILGCDGLWGVFGPSDAVDFVQKLLNEGLPVTTVSRRLVREAVRERRCKDNCTAIIIAFKRN* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0313 321 MobiDBLite consensus disorder prediction 1 35 - -
Tpr5g0313 321 PANTHER INTEGRIN-LINKED KINASE-ASSOCIATED SERINE/THREONINE PHOSPHATASE 2C 8 315 - -
Tpr5g0313 321 ProSiteProfiles PPM-type phosphatase domain profile. 44 318 IPR001932 -
Tpr5g0313 321 Gene3D - 23 320 IPR036457 -
Tpr5g0313 321 PANTHER PROTEIN PHOSPHATASE 2C 8 315 IPR015655 GO:0004722|GO:0006470
Tpr5g0313 321 Pfam Protein phosphatase 2C 48 306 IPR001932 -
Tpr5g0313 321 CDD PP2Cc 48 318 IPR001932 -
Tpr5g0313 321 SMART PP2C_4 40 316 IPR001932 -
Tpr5g0313 321 SUPERFAMILY PP2C-like 40 319 IPR036457 -
Tpr5g0313 321 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0313 Tpr-Chr5 4769084 4775821 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0313 41 270 PP2C-type Phosphatase Gene Family AT1G18030 75.217 1.44e-130 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0313 K17500 - mnt:21396468 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0313 5 4769084 4775821 Tpr5g0313 5 4769084 4775821 ECH