Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0302 ATGGTGCATAATATCTTAATGCCATTTCTTTGGTTCTTATTATTCTCCCACATGACAAGAACTTCCACTTCATTACACACTTTAGCAGTGAACCAAACGATCCGGGATGGTGGTGGTGAGAGTTTAGTTTCAGTAGGTGGGATCACTGAATTGGGTTTCTTCAGCCCCGGGAGTTCAAAAAGTCGATATTTGGGTGTATGGTACAGGAATGTAACCCCCTTAACAGTGATATGGGTGGCCAATAGAGAAACACCTCTACAAAACCATTCAGGAGTGTTAAAGCTCAATGCAAATGGGATTTTTCAGCTTCTCAATGGCCCTGCTAACAGCGCTATAATTTGGTCATCCAATACAACAAGCAAAGCCGGGAATCTGAATAACCCTATCGCTCAGCTCCTGGATTCAGGAAATTTGGTAGTGAAAAATGGACAGCAAACTGATGAATTTTTGTGGCAGAGTTTTGATTATCCCTCTGATACATTGATGTCCGGAATGAAACTTGGATGGAACTTTGAAATTGGCCTAGAAAGATTCACATCATCGTGGAAAAGTGATGATGACCCTGCTGAGGGAGAATATGCTATGAAACTTGACCTTAGAGGATATCCCCAGATAATTACATTCAAAGGGTCTGATATAGATATTAGAGCAGGGCCATGGCTCGGTGAGTTCATCGCTGGATCTCAAGGACCAACTCCAGGAGCGACGCAAAGATTTGTGTTCAATGAAAAAGAAGTGTATTATGAATACGAGAGTAATGAAAGCTCAACTATCGCCTTAAATAAACTGGCTCCTTCAGGTGCTGAGCAGATTCTGTATTGGTCCGTTGGATCGAGCAAAAGGCAAGTGTACTCAAATGGGAAGGATGAATGCGAAGACTACACCTATTGTGGTAAAAATTCTATATGCACCATGGATGGTAACATTCCAACTTGTGCGTGCTTGAAAGGGTATGTTCCCAAGATTCCTCAACAGTGGAAGCTGTCTCACTGGAAAGACGGTTGTATTCCGAGGAATGGATCTAATTGCAAAAACAGTACCACGTACAAAACAGAGGGGTTCTTCAAGTACACACACATGAAGTATCCAGATACGTCTTCATCATGGTTTGATAAGAGCACGAACCTTGAGGAATGTAAGGCGTTGTGTCTCAGAAACTGTTCCTGTGTAGCCTGTGCTAATTTAGATACCCGCAATGGGGGAACTGGGTGTCTTCTTTGGTTTAATTATCTGGTTGATGTGAGGGAATTCTCTAAATGGGGACAAGATCTTTATGTCAAAGCCCCTCTTTCAGAACTAGATCAAGTCGCAGTAGATAACCATGGAAACATCAAGAAGAAGATAGTCGGAATCACAGTTGTTGTGATTATTATTATTGGATTAATTTCATGTGGATCGATATGGATGATTAAAAAACCAGGGGCTGCAAGAAATACTTTCAATTTCAACAAGCGTTACGTAAGAAACCTAAGGAAGGAAGATGATGACTTGACAACATTCGATTTCTCGGTCTTGGCTTATGCCACTAACAACTTTTCAAGCACTAACAAACTTGGAGAAGGTGGTTTTGGACCAGTATACAAGGGAATGTTGATAGATGGACAAGAGATAGCTGTGAAAAGACTTTCAAAAAGATCTGGACAAGGCTTGGAAGAATTTAAAAATGAAGTGGCACTGATTGCAAAACTTCAGCACCGTAATCTCATAAAGCTTCTTGGTTGTTGTATTCAAGGAGAAGAAACAATGTTGATCTATGAATACATGCCGAACAAAAGCTTGGACTACTTTATTTTTGATGACACCAAAACGATGTCACTGGATTGGCTTAGGCGTTTCAATATTATTGGTAGCATTGCTCGAGGACTTCTTTATCTTCATCAAGACTCAAGAGTGAGGATTATTCACAGAGATCTAAAAACTAGCAATATATTACTAGACGTAAATTTGGAGCCGAAAATATCAGACTTTGGCTTGGCTCGAATCTTTTTGGGGGACCAAATCGAGGCAAACACAAATAGAGTGGCTGGAACTTATGGCTACATATCTCCAGAGTATGCTGTCCATGGGGATTTCTCAGTGAAATCAGATGTATTTAGTTATGGTGTGATTGTACTAGAGATTGTAAGTGGGAAACGGAATAGGGGATTTTCAAACCTCGAGCAGTGCAATAATCTTCTTGGATATGCATGGAGATTATGGACGGAAGAGAGAGCCCTGGAACTATTGGATGAAGTGTTACGGGAACAATATACAGCATTTGAAGTCATACGAAGTATACAGGTGGGCTTGTTATGTGTGCAACAAAGACCAGAAGATAGACCAGACATGTCATCTGTGGTTCTAATGATAAATGGTCAGCAACTATTGCCAGAGCCAAAGGTTCCTGGCTTTTACACTGAAAAGGATTTAACTACCGAATCAGATTCTTCACTCGCAACTCACAAATTCTGCTCATCTAATGAAATATCCATTACACAGTTAGATGCAAGATAG 2493 0.4063 MVHNILMPFLWFLLFSHMTRTSTSLHTLAVNQTIRDGGGESLVSVGGITELGFFSPGSSKSRYLGVWYRNVTPLTVIWVANRETPLQNHSGVLKLNANGIFQLLNGPANSAIIWSSNTTSKAGNLNNPIAQLLDSGNLVVKNGQQTDEFLWQSFDYPSDTLMSGMKLGWNFEIGLERFTSSWKSDDDPAEGEYAMKLDLRGYPQIITFKGSDIDIRAGPWLGEFIAGSQGPTPGATQRFVFNEKEVYYEYESNESSTIALNKLAPSGAEQILYWSVGSSKRQVYSNGKDECEDYTYCGKNSICTMDGNIPTCACLKGYVPKIPQQWKLSHWKDGCIPRNGSNCKNSTTYKTEGFFKYTHMKYPDTSSSWFDKSTNLEECKALCLRNCSCVACANLDTRNGGTGCLLWFNYLVDVREFSKWGQDLYVKAPLSELDQVAVDNHGNIKKKIVGITVVVIIIIGLISCGSIWMIKKPGAARNTFNFNKRYVRNLRKEDDDLTTFDFSVLAYATNNFSSTNKLGEGGFGPVYKGMLIDGQEIAVKRLSKRSGQGLEEFKNEVALIAKLQHRNLIKLLGCCIQGEETMLIYEYMPNKSLDYFIFDDTKTMSLDWLRRFNIIGSIARGLLYLHQDSRVRIIHRDLKTSNILLDVNLEPKISDFGLARIFLGDQIEANTNRVAGTYGYISPEYAVHGDFSVKSDVFSYGVIVLEIVSGKRNRGFSNLEQCNNLLGYAWRLWTEERALELLDEVLREQYTAFEVIRSIQVGLLCVQQRPEDRPDMSSVVLMINGQQLLPEPKVPGFYTEKDLTTESDSSLATHKFCSSNEISITQLDAR* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0302 830 Pfam D-mannose binding lectin 75 183 IPR001480 -
Tpr5g0302 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Tpr5g0302 830 CDD STKc_IRAK 518 785 - -
Tpr5g0302 830 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 827 - -
Tpr5g0302 830 ProSiteProfiles Protein kinase domain profile. 512 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0302 830 Gene3D Hepatocyte Growth Factor 345 425 - -
Tpr5g0302 830 ProSiteProfiles EGF-like domain profile. 287 324 IPR000742 -
Tpr5g0302 830 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 20 827 - -
Tpr5g0302 830 PIRSF SRK 1 830 IPR024171 GO:0004674
Tpr5g0302 830 SMART ntp_6 349 428 IPR003609 -
Tpr5g0302 830 Pfam S-locus glycoprotein domain 216 321 IPR000858 GO:0048544
Tpr5g0302 830 ProSiteProfiles Bulb-type lectin domain profile. 19 153 IPR001480 -
Tpr5g0302 830 SUPERFAMILY Protein kinase-like (PK-like) 495 795 IPR011009 -
Tpr5g0302 830 Pfam PAN-like domain 349 414 IPR003609 -
Tpr5g0302 830 CDD B_lectin 37 157 IPR001480 -
Tpr5g0302 830 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 188 IPR036426 -
Tpr5g0302 830 SMART serkin_6 512 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0302 830 ProSiteProfiles PAN/Apple domain profile. 343 429 IPR003609 -
Tpr5g0302 830 Pfam Protein tyrosine and serine/threonine kinase 515 780 IPR001245 GO:0004672|GO:0006468
Tpr5g0302 830 Gene3D Transferase(Phosphotransferase) domain 1 588 790 - -
Tpr5g0302 830 Gene3D - 21 154 IPR036426 -
Tpr5g0302 830 Gene3D Phosphorylase Kinase; domain 1 486 587 - -
Tpr5g0302 830 CDD PAN_AP_plant 341 427 - -
Tpr5g0302 830 SMART blect_4 33 157 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0302 Tpr-Chr5 4485625 4506177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0302 439 798 Receptor kinase-like Gene Family AT4G23190 52.162 1.01e-127 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr5g0302 PK_Tyr_Ser-Thr 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0302 - - gmx:100776576 1083.94