Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0284 ATGCCAAGTTTCTCTTTTTTATGTCAATGTTTTTCCCCTGATGGAACTAGAAAGAAAAACAACCCTTCACTAACAAGGGATTTTGAGGAGAATGGTAGCAATTTGGTGGCAATGAGTTCTAAGAAGAAAATCAGCAGCAATGATCAAAGTGTGTTTGTTGGCTCCAAGGTTACGAGCACATGTAATGAATCAGTTCCTGTGGATGTGATTTCTAAGTTACCAAATAGTCATGGTGGTCAATCAATGTTGATTGATTCCGAGGTGCAGAATAGCCGATGCAATATTAGTGAGAGTGAGATATTCAAGTATTCTGAACTTGAAGAAGCCACCAATAAATTTGACACTAGTAGAATACTTGGGAGTGGCGGCTACGGAACAGTTTACTCTGGAACACTTAAAGATGGGCGTCTTGTTGCAATAAAGCGCTTGCATGAAGACAAGTTCAAGATCTTACGGTTACATGATAAGAAGCTTGAAGAGGAGACACTAAGAAAGTTCATCAATGAAGTTTCAATGTTAACTCGCATGAGGCATGAAAATCTTGTCCAACTGTACGGCTGCACCTCTCCTCAAACTCGTGAACTACTTCTCGTGCAAGAATATGTTCCCAATGGAACCTTGGCTCGTCGTCTTCGTAAAGACATCTTGCCATGGCGAACTCGACTAAATGTTTCCGTACAAACTGCAAGTGCATTGACTTATCTTCATGCTTCCAATGTTATCCACCGTGATGTGAAAACGAGTAATGTTCTACTTGACAGAAGTTTGAATGCTAAAGTTGCAGACTTTGGATTGTCGCGCCTTGTCCCGCATGGTGCTACACACATCACAACCGATCCTGCGGGAACTCCCGGTTATATTGATCCGGAGTATTACGAACATTGTCATCTTTCGGATAAAAGTGATGTGTACAGCTTCGGAGTGATATTGGTCGAGTTGATTTCATCTTTGCCCGCATATAGCGAGGATGAAAAACAACCTTTTCTTTCGGATTTTGCTATGGATAAAATATTCAATGGAGAACTCGAAAAGCTTGTCGACCCGAATCTTGGACTTGAATCAGACAATTGGATAAGTGAAACAGTAAGTGCAGTGGCAGAGTTGGCATTTGGCTGTTTACAACCTCAAAGAAACATGAGACCTTCGATGAGTGAAGTGTTGAACACTCTTGAGAGCATAAAAAGTGGAAGTTCTCAAAAAGCTCTTAAATGGGGTTCAAATCATTGTTATAATGCTACCAAAGTTCATATTGTGTCACGTTTGCCTGATGATTATTTTGAGAAGAAATAG 1290 0.4054 MPSFSFLCQCFSPDGTRKKNNPSLTRDFEENGSNLVAMSSKKKISSNDQSVFVGSKVTSTCNESVPVDVISKLPNSHGGQSMLIDSEVQNSRCNISESEIFKYSELEEATNKFDTSRILGSGGYGTVYSGTLKDGRLVAIKRLHEDKFKILRLHDKKLEEETLRKFINEVSMLTRMRHENLVQLYGCTSPQTRELLLVQEYVPNGTLARRLRKDILPWRTRLNVSVQTASALTYLHASNVIHRDVKTSNVLLDRSLNAKVADFGLSRLVPHGATHITTDPAGTPGYIDPEYYEHCHLSDKSDVYSFGVILVELISSLPAYSEDEKQPFLSDFAMDKIFNGELEKLVDPNLGLESDNWISETVSAVAELAFGCLQPQRNMRPSMSEVLNTLESIKSGSSQKALKWGSNHCYNATKVHIVSRLPDDYFEKK* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0284 429 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 87 400 IPR044652 -
Tpr5g0284 429 Gene3D Phosphorylase Kinase; domain 1 84 201 - -
Tpr5g0284 429 ProSiteProfiles Protein kinase domain profile. 113 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0284 429 Gene3D Transferase(Phosphotransferase) domain 1 202 414 - -
Tpr5g0284 429 SUPERFAMILY Protein kinase-like (PK-like) 94 391 IPR011009 -
Tpr5g0284 429 Pfam Protein kinase domain 114 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0284 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Tpr5g0284 429 ProSitePatterns Protein kinases ATP-binding region signature. 119 141 IPR017441 GO:0005524
Tpr5g0284 429 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 87 400 - -
Tpr5g0284 429 SMART serkin_6 113 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0284 Tpr-Chr5 4185181 4188279 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0284 100 395 Receptor kinase-like Gene Family AT1G25390 51.316 9.53e-103 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Tpr5g0284 Pkinase 4.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0284 - - mtr:MTR_6g082700 720.694