Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0283 ATGAAAATCACTATGGATAAATATTCTTCTTCTCAAACGCGTCTACCTCTTCTTCTACCATCTTTTCCTTTCACTATCAACACATTTCTCTTCCTCTTCCTCTCACTCTTATTCTTAATCCAATTCCAAAAGCACGCCACTACTAATGCGGTAATGTACGCATCTTGTGCACCTTTTGACTGTGGAAATTTCAGCAATATTAGTTATCCATTTTGGAGTTTTAACATTCAACCAAGTTATTGTGGCCATCCAAACTTCAAGCTTGATTGCCAACATGGCAATTTAACTATTGACATAAAGTCGCAAAAGTTTCACATCCTTCAAATAAATCAAACATCTCAACTTTTGAGGATTGCAAGGGACGATTTATGGGGTTACGATTCCAATGTTGTGCATTCTTGTCCTAAGCAATATATTGATGTAAACTTAGATTTGAATTTCTTCAAGTACACTGCCAATAATGAAAACTATACTCTATTGTATGAATGTGGTCCTCTTTCACAGTCCTCTACTTTGAGTTCAGAAGTTTTCGAAGTAATTTCTTGCCTCATAGAGGGTAAACCTCGTGATGCATACCTAGTGTCAAGTGCCAAATTGGCTGATTTCATTGTTATGAAGTGTAAAAATAGTATCACAGTTTCTGGCTTGAAGAATTCCTTCACAAACGACTCGGATATTGTGGTGGATGTTTTAGATGAAGGATTCGAGGTTGGGTGGAGTGGTGTGGGAGAAGACGAATGTGATGGTTGCATTAAATCTGGTGGGAGATGTGGATACAATACATCAGAAAATGCAATTTTCTGTCTCTCGCCGGAGAAATCTGTGGCACCAATAGACGGAGTAACACCATCAACCGCTGTTGCAGGTAAGCAGTTGAGCAGACAAGGGAAAATAAAAATCATTATAGGAAGTGCAGGTGCAGTATTTGTAGCATTATCCGTATGTATCACAATCTTTTGCTTCAAATACAAGTCAACAAAAAATAACCAAGAGATCGAAAAATTCTTAAAAACTCATGAACCCTTTCCTGTTAGAAGATACAAATTCTCACATATCAAGAAAATGACCAACAACTTCAAAGTTGAATTAGGACAAGGTGGTTATGGTGCTGTATACAAAGGAAAGATACTCGATGATCGCCCTGTGGCTGTAAGGATATTAAAGTCATCCAAAAGAAATGGTGAAGATTTTATGAATGAGGTTTCTAGCATTACTAAAACCTCTCATGTTAATGTTGTCACCCTTCTCAAACCTCATAATATTCTCTTGGATGAGAACTTTTGTCCAAAGATATCAGATTTTGGGATGGCAAGACTTTGCCCGAAGAAAGAGAGCATTATTTCGATGTCAGGTGCTAGAGGGACAATGGGATATGTAGCTCCTGAGCTGTGGAATAGAAATTTTGGACGAGTTTCACACAAGTCTGATGTTTATAGTTAA 1440 0.3757 MKITMDKYSSSQTRLPLLLPSFPFTINTFLFLFLSLLFLIQFQKHATTNAVMYASCAPFDCGNFSNISYPFWSFNIQPSYCGHPNFKLDCQHGNLTIDIKSQKFHILQINQTSQLLRIARDDLWGYDSNVVHSCPKQYIDVNLDLNFFKYTANNENYTLLYECGPLSQSSTLSSEVFEVISCLIEGKPRDAYLVSSAKLADFIVMKCKNSITVSGLKNSFTNDSDIVVDVLDEGFEVGWSGVGEDECDGCIKSGGRCGYNTSENAIFCLSPEKSVAPIDGVTPSTAVAGKQLSRQGKIKIIIGSAGAVFVALSVCITIFCFKYKSTKNNQEIEKFLKTHEPFPVRRYKFSHIKKMTNNFKVELGQGGYGAVYKGKILDDRPVAVRILKSSKRNGEDFMNEVSSITKTSHVNVVTLLKPHNILLDENFCPKISDFGMARLCPKKESIISMSGARGTMGYVAPELWNRNFGRVSHKSDVYS* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0283 479 Gene3D Phosphorylase Kinase; domain 1 318 416 - -
Tpr5g0283 479 ProSiteProfiles Protein kinase domain profile. 294 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0283 479 SUPERFAMILY Protein kinase-like (PK-like) 345 479 IPR011009 -
Tpr5g0283 479 Pfam Protein kinase domain 416 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0283 479 PANTHER - 44 416 - -
Tpr5g0283 479 PANTHER - 416 479 - -
Tpr5g0283 479 PANTHER RUST RESISTANCE KINASE LR10-RELATED 416 479 IPR045874 GO:0004672
Tpr5g0283 479 PANTHER RUST RESISTANCE KINASE LR10-RELATED 44 416 IPR045874 GO:0004672
Tpr5g0283 479 Gene3D Transferase(Phosphotransferase) domain 1 417 479 - -
Tpr5g0283 479 Pfam Wall-associated receptor kinase C-terminal 203 272 IPR032872 -
Tpr5g0283 479 ProSitePatterns Protein kinases ATP-binding region signature. 363 388 IPR017441 GO:0005524
Tpr5g0283 479 Pfam Wall-associated receptor kinase galacturonan-binding 56 120 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0283 Tpr-Chr5 4164277 4169628 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0283 59 479 Receptor kinase-like Gene Family AT1G66930 32.563 3.97e-59 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr5g0283 WAK_assoc 2.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0283 - - cam:101492618 374.015