LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr5g0282	ATGGAGATTTTCAAATTCTTCTACTTCATTAATCTTCTCTCTGCTTTCATCTTAACACCGTCTTTAGCAATTGATCCTTATTCACAAGCACTCTTAAGTCTAAAATCTGAGCTTATAGATTATGATAATAGCTTGCATGACTGGGTGGTGGCATCATCAAGTGGAAGTTCCTATGCATGTTCTTGGTCTGGCATCAAGTGTAACAAGGACTCAATTGTAACTTCAATAGACCTTTCCATGAAGAAACTAGGAGGTATACTATCAGGTAACCAATTAAGTGTCTTCACAAATGTTACTGATTTCAACATAAGTTATAATTTCTTCTCTGGGAATCTTCCACCAGAAATTTTCAACCTCACAAGCTTAAAAAGCTTGGATATAAGCAGAAACAATTTCTCAGGTCAATTCCCAAAAGGAATTCCTAAACTCAAAAATTTGGTTGTACTTGATGCCTTTAGCAACAGCTTTTCAGGTCAATTACCTGCTGAATTTTCAGAATTGGAGTATCTTAAGATTCTCAACCTAGCTGGTAGTTACTTCAGAGGAACAATTCCATCTGAATATGGTTCTTTCAGAAGCCTTGAGTTTCTTCATTTAGCTGGAAATTCTCTATCTGGAAGTATACCTCCAGAACTTGGTAACCTCAAAACAGTGACACATATGGAGATTGGCTACAACTTTTATCAGGGTTTCATTCCACCTCAACTAGGTAATTTGAGCCAGCTTCGTTATCTCGACATAGCTGGTGCAAATCTATCTGGACCAATTCCAAAGGAATTTTCCAACCTCACAAGTTTGCAATCACTTTTTCTATTCAGAAACCAACTCACAGGATCAATACCAAGTGACTTCAGCAATATTAAACCTCTCACAAATTTAGATCTCTCTGATAATTTCCTTTCAGGGTCAATTCCTGAAAGCTTTTCAGAGCTGAAAAGCTTAAGACTACTTAGTCTCATGTATAATGACATGAGTGGAACTGTCCCTGATGGGATTGCAGAACTAAGATCCTTGGAAACTTTACTCATTTGGAACAATCACTTCTCTGGATTACTCCCCAAGAGTTTAGGTAAAAACTCCAAACTCAAGTGGGTGGATGTCTCCACAAACAAATTCAATGGCAGCATACCAGAAGACATTTGTCTAGGTGGAGTACTGGTGAAGCTAATCATGTTTTCAAACAAATTCACAGGTAGTCTTTTCTCGATCTCGAATTGTTCTTCCCTTGTTCGACTTCGCCTGGAAGATAATTCATTCTCAGATGAAGTCCCTTTAAAATTCAGCTATCTTCCTGATATCACATATGTTGATTTGTCATTGAACAAATTTGTTGGTGGGATTCCCTTGGATATTTCTCAAGCTACTCAATTGGAGTATTTTAATGTCTCTTATAATAAGCAATTAGGAGGCATCATCCCTACATTAATATGGTCTTTGCCAAAACTTCAAAATTTCTCAGCATCTTCTTGTGGTATTTTAGGCATTCTTCCTTCATTTGACTCCTGCAAATCAATTTCAACAATTGATCTTGGTAGAAACAACTTATCTGGAACAATCCCAAAAAGTGTTTCGAAATGTCAAGCTCTTGTGACAATCGAATTGCCTGACAATAATATGACGGGTCAAATACCTGACGAGCTTGCAAGTATCCCTATTCTTGAAATTGTAGATTTATCTAATAACAAGTTCAATGGCCCCATACCTGAAAAGTTTGGTAGTTCATCAAGTTTACATCTTCTCAATGTGTCTTTCAACAATATCTCAGGTTCAATACCAAATGCAAAGACATTTAAATTGATGAATAACAGTGCATTTGTTGGAAACTCGGAGCTATGCGGAGCTCCTCTAAGACCATGTTTTGAGAGAGTAGGAATATTCAGTAGCAAAGGAACTCAGAAGCTTACGCATATTTTGTTACTCTCTGTAGGGTTGCTAATAATCCTTCTGGTATTGGCTTTTGGAATACTTCATTTCAGAAAGGGATTTAAAAGTCAATGGAAAATGGTTTCATTTGTTGGACTTCCTCAATTCACAGCGAACGATGTCTTGATAAGCTTCAATGTTGTTGCAACCGAACATACGCATATTCCATCACCATCAACCGTAGTTACGAAAGCAGTTCTTCCAACAGGTATAACAGTATTAGTCAAGAAGATTGAATGGGAAAATAGGAGCATTAATGGTGTGTCGGAATTTATAATGAGACTAGGAAATGCAAGGCACAAGAATTTAATCAGATTATTGGGCTTTTGCCATAACCAGCAACTAGTTTACCTTTTGTATGATTACTTACCGAATGGAAACTTGGCTGAGAAAATTGGAATGAAATGGGATTGGGCAGCTAAATTCAAAACAGTGGTTGGAATTGCAAGGGGACTGTGCTTTCTTCATCATGAATGTTACCCGGCTATACCACATGGAGACTTGAAATCTAGCAACATTGTATTCGATGAAAATATGGAACCCCATTTAGCTGAATTTGGGTTTAAACAAGTCTTACAGTTGAGCAATGGCGCATCTCCAACTAAAACTATGCAGGAAACAGAATACAATGAAGTAATGACAGAGGAACTCAGCAATGATGTCTACAATTTTGGGAAGATGATTCTAGAAATTTTAACTGGCGGAAAGTTGACAAATGCAGCAGCCAACATTCACAGCAATTCACAGGAGGTTCTTCTAAGAGAAGTTTACAATGGTAATGAAGCGACCTCTGTCGGTTCAATGCAAGAGATTAAACTGGTTATTGAGGTTGCTATGCTTTGCACTAAAAGCAGATCATCCGATCGTCCATTCATGGAAGATGTTTATAATTTGCTTACTAACAAGTTTGCAAATGTGTAA	2844	0.3734	MEIFKFFYFINLLSAFILTPSLAIDPYSQALLSLKSELIDYDNSLHDWVVASSSGSSYACSWSGIKCNKDSIVTSIDLSMKKLGGILSGNQLSVFTNVTDFNISYNFFSGNLPPEIFNLTSLKSLDISRNNFSGQFPKGIPKLKNLVVLDAFSNSFSGQLPAEFSELEYLKILNLAGSYFRGTIPSEYGSFRSLEFLHLAGNSLSGSIPPELGNLKTVTHMEIGYNFYQGFIPPQLGNLSQLRYLDIAGANLSGPIPKEFSNLTSLQSLFLFRNQLTGSIPSDFSNIKPLTNLDLSDNFLSGSIPESFSELKSLRLLSLMYNDMSGTVPDGIAELRSLETLLIWNNHFSGLLPKSLGKNSKLKWVDVSTNKFNGSIPEDICLGGVLVKLIMFSNKFTGSLFSISNCSSLVRLRLEDNSFSDEVPLKFSYLPDITYVDLSLNKFVGGIPLDISQATQLEYFNVSYNKQLGGIIPTLIWSLPKLQNFSASSCGILGILPSFDSCKSISTIDLGRNNLSGTIPKSVSKCQALVTIELPDNNMTGQIPDELASIPILEIVDLSNNKFNGPIPEKFGSSSSLHLLNVSFNNISGSIPNAKTFKLMNNSAFVGNSELCGAPLRPCFERVGIFSSKGTQKLTHILLLSVGLLIILLVLAFGILHFRKGFKSQWKMVSFVGLPQFTANDVLISFNVVATEHTHIPSPSTVVTKAVLPTGITVLVKKIEWENRSINGVSEFIMRLGNARHKNLIRLLGFCHNQQLVYLLYDYLPNGNLAEKIGMKWDWAAKFKTVVGIARGLCFLHHECYPAIPHGDLKSSNIVFDENMEPHLAEFGFKQVLQLSNGASPTKTMQETEYNEVMTEELSNDVYNFGKMILEILTGGKLTNAAANIHSNSQEVLLREVYNGNEATSVGSMQEIKLVIEVAMLCTKSRSSDRPFMEDVYNLLTNKFANV*	948

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr5g0282	947	Gene3D	Ribonuclease Inhibitor	26	308	IPR032675	-
	Tpr5g0282	947	SUPERFAMILY	RNI-like	75	397	-	-
	Tpr5g0282	947	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE	6	942	-	-
	Tpr5g0282	947	Pfam	Protein tyrosine and serine/threonine kinase	710	939	IPR001245	GO:0004672\|GO:0006468
	Tpr5g0282	947	SUPERFAMILY	Protein kinase-like (PK-like)	702	940	IPR011009	-
	Tpr5g0282	947	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	804	816	IPR008271	GO:0004672\|GO:0006468
	Tpr5g0282	947	Gene3D	Phosphorylase Kinase; domain 1	677	761	-	-
	Tpr5g0282	947	Pfam	Leucine rich repeat N-terminal domain	29	68	IPR013210	-
	Tpr5g0282	947	SMART	LRR_typ_2	119	143	IPR003591	-
	Tpr5g0282	947	SMART	LRR_typ_2	335	358	IPR003591	-
	Tpr5g0282	947	SMART	LRR_typ_2	191	215	IPR003591	-
	Tpr5g0282	947	SMART	LRR_typ_2	263	286	IPR003591	-
	Tpr5g0282	947	Pfam	Leucine Rich Repeat	290	311	IPR001611	GO:0005515
	Tpr5g0282	947	ProSiteProfiles	Protein kinase domain profile.	666	945	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr5g0282	947	SUPERFAMILY	L domain-like	386	619	-	-
	Tpr5g0282	947	PANTHER	UNNAMED PRODUCT	6	942	-	-
	Tpr5g0282	947	Gene3D	Transferase(Phosphotransferase) domain 1	762	946	-	-
	Tpr5g0282	947	Gene3D	Ribonuclease Inhibitor	309	623	IPR032675	-
	Tpr5g0282	947	SMART	serkin_6	702	945	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr5g0282	Tpr-Chr5	4152101	4162052	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr5g0282	2	944	Receptor kinase-like Gene Family	AT5G51350	52.642	0.0	924

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XI-1	Tpr5g0282		PK_Tyr_Ser-Thr	1.6e-17	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr5g0282	-		-	aprc:113852384	1431.77