Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0280 ATGGATAATCATTTCCATGTGTTCCCAAATATTAAATACATCTTTTTCTTCTCAATAATAACCACTTTTTTCCCTCAACAATCTAAATCAGTTTACAATTATGCAAGTTGTAGAGACAACTCCTACAGTTGTGGAAATATCACCAACATCTCTTATCCATTCTGGGGACAAAATGGCGATCCTAACTGTGGCGCCGGCAAACCGTTTTACCTTAACTGCAACGAAAACAACGTTACTACCATTATGTTATCCTTACAAAATTTCACAGTACTTGATATCAACACCACAACTCACACCATTAAACTCCAAAAACCAGACCTTTTTCAAGATCTTTGTTCTCCTCAATTTGATGAAACTTTTTTGTCCCCAATTTTGTTTCACTATCTCCCAAATATCAAGAACATCACCATATACTACGATTGTTCCTCTCAATATCCACCAAATTTTTATCCATGTGGACCTGAGAATCCTGCTTTCTTTTATGTTGGTGAAGAAAATGATGTGTTAAGGAGTTGTAAGAGACATATTCAAGTGCCAGTAGGAACAGATTTTCCTATAGAGAATAATCGAGATGGTTATTTTGAGGGTGATGTTGTTGAAAAAGGTTTGAATGAAGGGTTTGAGGTGGAGTATATTGTGGAGGATGAGGAATGTTTGAAGTGTTTGGGAAGTGATGAAGGAGATTGTAAATGGAAGAACAATAATGATATTGAGAAACATGTTAAGTCCTCTTGCTATTATGATAATTGTCCAAATGGATCTATTGCTCATTCCTCACACTGTCACAAAAGCCAATCGTCGAAGAAGACTCTCATTATTGGTGTTGTTGTTTCTGCTATGTTCGTAGTACTTGTACTGATCATCGGCATATATTTCTATAGGCGCAAAAAGAATATACGTTATGCAAAGTCTTATGTACAGTCTCGCAGCCTCTCTACTGATCCATCTTCAAAGGATCTTGAGAGAGGAAGTCAATACTTTGGTGGAAGTCAAAACCTTGGTGTGCAACATTTCACTTATACTGAGCTCGAAGAAGCCACAAACTACTTTGATCCAACCAAAGAACTAGGAGAAGGGGGCTTTGGGACAGTGTATTTTGGAAAACTGTATGATGGGCGAAGTGTTGCAGTGAAGAGGTTATATGAGAACAATTACAAAAGAGTCGAGCAGTTCATGAATGAAGTTAAACTCTTGGCAGGATTAGTCCATCCAAATCTTGTGTCTCTATATGGTTGCACTTCACGCCACAGCCGCGAACTTCTACTTGTCTACGAGTACGTTTCCAATGGAACTGTCGCTGATCATCTCCATGGTAAACAAACAAAACATGGAAAGCTTTCTTGGCCGATTAGAATGAATATTGCCGTGGAGACAGCAAGTGCGCTAAAGTATCTTCATATTTCTGACATCATTCACCGAGATATAAAAACCAATAATATTCTTCTTGACGCTCACTTCCGCGTCAAAGTAGCAGATTTTGGCCTCTCACGCCTTTTTCCATATGATCAAACTCATGTTTCAACCGCTCCACAAGGGACTCCGGGTTATGTAGATCCTGATTACCATCAATGCTACCAACTTACCGATAAAAGTGATGTCTATAGCTTTGGAGTCGTGATGATTGAGTTGATATCATCTTTACCTGCTGTCGATATAACAAGACATAGACATGAAATCAATTTAGCCAACATGGCTATCAACAGAATTCAAAATCAAGCATTGCATGAAATCGTCGATCCTACCCTCAGTTACGAATCAGATCCCAAGGTAAAGAAAATGATAAATGCTATTGGTGAATTAGCATTTCAATGTTTACAAAGTTCCAAAGAATTGAGACCTTGCATGGATGATGTGTTAGAAACTTTATTGGATATTCAAAGTGATGGTAAACATAAAAGTAAACCTGAGGTAATGGACATTTCAAGCTTAGCTGATGATGTTGTTTTGTTGAATCATGATCCACCTCCATTATCACCTGATTCAAATCTTGGTAGCAATTATACAACACCAAATACTAGTGGTTAA 2025 0.3778 MDNHFHVFPNIKYIFFFSIITTFFPQQSKSVYNYASCRDNSYSCGNITNISYPFWGQNGDPNCGAGKPFYLNCNENNVTTIMLSLQNFTVLDINTTTHTIKLQKPDLFQDLCSPQFDETFLSPILFHYLPNIKNITIYYDCSSQYPPNFYPCGPENPAFFYVGEENDVLRSCKRHIQVPVGTDFPIENNRDGYFEGDVVEKGLNEGFEVEYIVEDEECLKCLGSDEGDCKWKNNNDIEKHVKSSCYYDNCPNGSIAHSSHCHKSQSSKKTLIIGVVVSAMFVVLVLIIGIYFYRRKKNIRYAKSYVQSRSLSTDPSSKDLERGSQYFGGSQNLGVQHFTYTELEEATNYFDPTKELGEGGFGTVYFGKLYDGRSVAVKRLYENNYKRVEQFMNEVKLLAGLVHPNLVSLYGCTSRHSRELLLVYEYVSNGTVADHLHGKQTKHGKLSWPIRMNIAVETASALKYLHISDIIHRDIKTNNILLDAHFRVKVADFGLSRLFPYDQTHVSTAPQGTPGYVDPDYHQCYQLTDKSDVYSFGVVMIELISSLPAVDITRHRHEINLANMAINRIQNQALHEIVDPTLSYESDPKVKKMINAIGELAFQCLQSSKELRPCMDDVLETLLDIQSDGKHKSKPEVMDISSLADDVVLLNHDPPPLSPDSNLGSNYTTPNTSG* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0280 674 Gene3D Phosphorylase Kinase; domain 1 328 426 - -
Tpr5g0280 674 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 16 662 IPR044652 -
Tpr5g0280 674 Pfam Wall-associated receptor kinase C-terminal 164 247 IPR032872 -
Tpr5g0280 674 Pfam Protein kinase domain 353 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0280 674 MobiDBLite consensus disorder prediction 658 674 - -
Tpr5g0280 674 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524
Tpr5g0280 674 Pfam Wall-associated receptor kinase galacturonan-binding 37 102 IPR025287 GO:0030247
Tpr5g0280 674 SMART serkin_6 350 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0280 674 Gene3D Transferase(Phosphotransferase) domain 1 427 638 - -
Tpr5g0280 674 SUPERFAMILY Protein kinase-like (PK-like) 332 630 IPR011009 -
Tpr5g0280 674 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 16 662 - -
Tpr5g0280 674 MobiDBLite consensus disorder prediction 653 674 - -
Tpr5g0280 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Tpr5g0280 674 ProSiteProfiles Protein kinase domain profile. 350 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0280 Tpr-Chr5 4094650 4124976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0280 37 674 Receptor kinase-like Gene Family AT1G25390 41.291 1.11e-141 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Tpr5g0280 Pkinase 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0280 - - cam:101492618 754.592