Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0278 ATGGCAAGAAACACAAATGGTCTTGTAACTCTTGTTTTTATGCTAGCTAACTTTCTCCATGGATCAGTAGCAACAAATTTCTCGGTTGGTCATTACCGTAACCAATTCGACGGGTACCCGCCGAAGAAGCCATTAATATTGTCATCCAAAATCCGTTGGGGTACCGAGAGAACATTAACCGTAGGTGACGTTCTTGAATTCGACTATCCTTATGGAGAACAACACAATGTGACAATGGTAACAAAATCAGATTTCGATAGTTGCAATAAAACAAACTTACATACAAACAGTTCAATCAGGGTGTTGGTTCTCCACCAAATAGCGCAATATTATTTCATTTGTACCATTGCAGATCACTGTTCAGTTGATGATGAGAAACTGTCAATTAATGTTGCTAATTCTGTTCCAGCACCAGAACAACCACCAATTGCTTCTTCTCCACCAACTCGTAGTCCTATTCCAGCACCTGTACAAGCACCGGTACCAACGGCCACCACTTCACCTCCACCTCCATCTCCTGCTACTGCACCAGAACAACCACCAAATGCTTCTTCTTCTCCACCTATTCCAGCACCTGTACAAGCACCGGTACCAACGGCCACCACTTCACCTCCACCTCCATCTCCTGCTACTGGTAGTCCCTCTAACTCGAAAAGGAAAGTCATTATAGGTCTTGGAAGTGCAGCAATGGTAGCATTCCTGATGTGCATCATTATTTATTGTTTTAGAGGGAAGTCATTAATACAACAAGTAAAATTTAGGTTTAATTTTAATACAAATGATGATAAAGTTATTGAACAATTTTTAAAAAATCATGGAGCTTTATCGCAAAAAAGATATAAATTTTCGGAAATAAAGAAAATGACAAACTCATTTAAAATTAAACTAGGTCAAGGGGGTTATGGTGTTGTGTACAAAGGAAAGTTATTCAATGGTTGTCTTGTGGCTGTGAAGATATTGAATAGATCAAAAGGAAATGGTGAAGAATTTATTAATGAGGTTGCAAGTATTACTAGAACTTCACATGTTAATGTTGTCAACCTTCTCGGATTTTGTTTTGAAAGTCGTAAAAAAGCTCTCATATATGAATTTATGTCTAATGGTTCTCTCGACAAATTTATTTACAATAAGGGATCTGAAACCATTGCATCTTTGAGTTGGGATAATTTGTATCAAATTGCAAAAGGGATAGCCCGTGGACTAGAGTACTTGCATAGAGGATGTAACACTCGAATTTTACATTTTGACATAAAACCGCACAACATTCTTTTAGATGAGAATTTTTGTCCAAAGATTTCAGATTTTGGACTTGCGAAACTTTGTCCTAGGAAAGAGAGTATTATTTCAATGTCAGATCAAAGAGGTACAATGGGATATGTAGCTCCAGAAGTGTGGAATAGAAGTTTTGGTGGAGTTTCACACAAGTCTGATGTTTATAGTTACGGAATGATGTTGTTGGAAATGGTTGGAGGGAGAAAAAACATTAATGCTAATGCAAGTCAAACAAGTGAGATATATTTTCCTCATTGGGTGTATAGTAGGCTTGAACTTGGTAATGATTTGAGACCTGACGGGATAATGGATACAGAAGAAGAAGATATTGCAAGGAGAATGACCATTGTGGGATTATGGTGCATTCAAACATTTCCTAATGATAGGCCTACAATGAGTAAAGTGATTGAACTGTTAGAAGTTAGCATGAATTTGTTGCAAATACCACCAAAACCATTATTTTCTTCTCCTACTAGATCAGACTCATAA 1761 0.3737 MARNTNGLVTLVFMLANFLHGSVATNFSVGHYRNQFDGYPPKKPLILSSKIRWGTERTLTVGDVLEFDYPYGEQHNVTMVTKSDFDSCNKTNLHTNSSIRVLVLHQIAQYYFICTIADHCSVDDEKLSINVANSVPAPEQPPIASSPPTRSPIPAPVQAPVPTATTSPPPPSPATAPEQPPNASSSPPIPAPVQAPVPTATTSPPPPSPATGSPSNSKRKVIIGLGSAAMVAFLMCIIIYCFRGKSLIQQVKFRFNFNTNDDKVIEQFLKNHGALSQKRYKFSEIKKMTNSFKIKLGQGGYGVVYKGKLFNGCLVAVKILNRSKGNGEEFINEVASITRTSHVNVVNLLGFCFESRKKALIYEFMSNGSLDKFIYNKGSETIASLSWDNLYQIAKGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESIISMSDQRGTMGYVAPEVWNRSFGGVSHKSDVYSYGMMLLEMVGGRKNINANASQTSEIYFPHWVYSRLELGNDLRPDGIMDTEEEDIARRMTIVGLWCIQTFPNDRPTMSKVIELLEVSMNLLQIPPKPLFSSPTRSDS* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0278 586 Pfam Protein kinase domain 295 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0278 586 MobiDBLite consensus disorder prediction 161 212 - -
Tpr5g0278 586 MobiDBLite consensus disorder prediction 161 217 - -
Tpr5g0278 586 SUPERFAMILY Cupredoxins 50 131 IPR008972 -
Tpr5g0278 586 Gene3D Transferase(Phosphotransferase) domain 1 365 571 - -
Tpr5g0278 586 ProSiteProfiles Phytocyanin domain profile. 25 133 IPR003245 GO:0009055
Tpr5g0278 586 Gene3D Phosphorylase Kinase; domain 1 255 364 - -
Tpr5g0278 586 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Tpr5g0278 586 SUPERFAMILY Protein kinase-like (PK-like) 274 565 IPR011009 -
Tpr5g0278 586 SMART serkin_6 290 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0278 586 ProSiteProfiles Protein kinase domain profile. 290 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0278 586 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 216 584 - -
Tpr5g0278 586 PANTHER RUST RESISTANCE KINASE LR10-RELATED 216 584 IPR045874 GO:0004672
Tpr5g0278 586 Gene3D - 46 132 IPR008972 -
Tpr5g0278 586 Pfam Plastocyanin-like domain 52 122 IPR003245 GO:0009055
Tpr5g0278 586 ProSitePatterns Protein kinases ATP-binding region signature. 296 318 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0278 Tpr-Chr5 4046707 4050814 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0278 195 585 Receptor kinase-like Gene Family AT4G18250 51.250 2.51e-126 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr5g0278 Pkinase 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0278 - - gmx:102665158 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0278 5 4046707 4050814 Tpr5g0278 5 4046707 4050814 ECH