Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0276 ATGGCAAGAAACACAAATGGTCTTGTAACTCTTGTTTTTATGCTAGCTAACTTTCTCCATGGATCAGTAGCAACAAATTTCTCGGTTGGTCATGGCAGTGACCAATTCCAAGGTGGGGAGGATCCAATCACATCGTCATTCAAAATCCATTGGGGTACCGAGAGAACATTAGCCGTAGGTGACGTTCTTGAATTCGACTATGGAGAACAACACAATGTGACAATGGTAACAAAATCAGATTTCAATAGTTGTAATAAAACAAACTTACATACAAACAGTTCAATCAGGGTGTTGGTTCTCAAGAAAGTAGCGCAATATTATTTCATTTGTACCATTGCAGATCACTGTTCAGCTTATGATGAGAAACTGTCAATTAATGTTGCTAATTCTGTTCCAGCACCAGAACAACCACCAATTGCTTCTTCTTCTGCACCAAATGCTACCACTTCACCTCCATCTCCTGCTACTGGTAGTCCCTCTAACTCGAAAAGGAAAGTCATTATAGGTGTTGGAAGTGCAGCAATGGTAGCATTCCTAATGTGCATCATAATTTATTGTTTTAGAGGGAAGTCATTAATACAACAAGTAAAATTTCGGTTTAATTTTAATACAAATGGTGATAAAGTTATTGAACAATTTTTAAAAAATCATGGAGCTTTATCGCAAAAAAGATATAAATTTTCGGAAATAAAGAAAATGACAAACTCATTTGAAATTAAACTAGGTCAAGGGGGTTATGGTGTTGTGTACAAAGGAAAGTTATTCAATGGTTGTCTTGTGGCTGTGAAGATATTGAATACATCAAAAGGAAATGGTGAAGAATTTATTAATGAGGTTGCAAGTATTACTAGAACTTCACATGTTAATGTTGTCAACCTTCTCGGATTTTGTTTTGAAAGTCGTAAAAAAGCTCTCATATATGAATTTATGTCTAATGGTTCTCTCGACAAATTTATTTACAATAAGGGATCTGAAACCATTGCATCTTTGAGTTGGGATAATTTGTATCAAATTGCAAAAGGGATAGCCCGTGGACTAGAGTACTTGCATAGAGGATGTAACACTCGAATTTTACATTTTGACATAAAACCGCACAACATTCTTTTAGATGAGAATTTTTGTCCAAAGATTTCAGATTTTGGACTTGCGAAACTTTGTCCTAGGAAAGAGAGTATTATTTCAATGTCAGATCAAAGAGGTACAATGGGATATGTAGCTCCAGAAGTGTGGAATAGAAGTTTTGGTGGAGTTTCACACAAGTCTGATGTTTATAGTTACGGAATGATGTTGTTGGAAATGGTTGGAGGGAGAAAAAACATTAATGCTAATGCAAGTCAAACAAGTGAGATATATTTTCCTCATTGGGTGTATAGTAGGCTTGAACTTGGTAATGATTTGAGACCTGACGGGATAATGAATACAGAAGAAGATGATATTGCAAGGAGAATGACCATTGTGGGATTATGGTGCATTCAAACATTTCCTAATGATAGGCCTACAATGAGTAAAGTGATTGAACTGTTAGAAGTTAGCATGAATTTGTTGCAAATACCACCAAAACCATTATTTTCTTCTCCTACTAGATCAGACTGA 1593 0.3559 MARNTNGLVTLVFMLANFLHGSVATNFSVGHGSDQFQGGEDPITSSFKIHWGTERTLAVGDVLEFDYGEQHNVTMVTKSDFNSCNKTNLHTNSSIRVLVLKKVAQYYFICTIADHCSAYDEKLSINVANSVPAPEQPPIASSSAPNATTSPPSPATGSPSNSKRKVIIGVGSAAMVAFLMCIIIYCFRGKSLIQQVKFRFNFNTNGDKVIEQFLKNHGALSQKRYKFSEIKKMTNSFEIKLGQGGYGVVYKGKLFNGCLVAVKILNTSKGNGEEFINEVASITRTSHVNVVNLLGFCFESRKKALIYEFMSNGSLDKFIYNKGSETIASLSWDNLYQIAKGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESIISMSDQRGTMGYVAPEVWNRSFGGVSHKSDVYSYGMMLLEMVGGRKNINANASQTSEIYFPHWVYSRLELGNDLRPDGIMNTEEDDIARRMTIVGLWCIQTFPNDRPTMSKVIELLEVSMNLLQIPPKPLFSSPTRSD* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0276 530 MobiDBLite consensus disorder prediction 134 161 - -
Tpr5g0276 530 ProSiteProfiles Phytocyanin domain profile. 34 129 IPR003245 GO:0009055
Tpr5g0276 530 CDD STKc_IRAK 241 509 - -
Tpr5g0276 530 ProSiteProfiles Protein kinase domain profile. 235 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0276 530 Pfam Protein kinase domain 240 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0276 530 Gene3D - 25 136 IPR008972 -
Tpr5g0276 530 Gene3D Transferase(Phosphotransferase) domain 1 310 516 - -
Tpr5g0276 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 357 369 IPR008271 GO:0004672|GO:0006468
Tpr5g0276 530 SUPERFAMILY Cupredoxins 24 127 IPR008972 -
Tpr5g0276 530 SUPERFAMILY Protein kinase-like (PK-like) 219 510 IPR011009 -
Tpr5g0276 530 Gene3D Phosphorylase Kinase; domain 1 202 309 - -
Tpr5g0276 530 Pfam Plastocyanin-like domain 49 117 IPR003245 GO:0009055
Tpr5g0276 530 PANTHER RUST RESISTANCE KINASE LR10-RELATED 161 529 IPR045874 GO:0004672
Tpr5g0276 530 SMART serkin_6 235 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0276 530 ProSitePatterns Protein kinases ATP-binding region signature. 241 263 IPR017441 GO:0005524
Tpr5g0276 530 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 161 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0276 Tpr-Chr5 4020703 4025658 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0276 142 523 Receptor kinase-like Gene Family AT4G18250 52.551 3.82e-128 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr5g0276 Pkinase 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0276 - - gmx:100799268 582.793