Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0270 ATGTCAAAGCAGCTTTTCCTTTTGCATAAGGTGTTGATATTCTGTGTTCTAGCACTTGCCTCAGCTCAAAGTGCCAGCAATGTTAAGGCTACATATCAATTGTTCAATTCTGAAAAAAGTAATAATAAGTGGGACTTGAATACATCGAATGTATTCTGTGCAGCTCAAGATGGGAACAAACCGTTGTCATGGAGAAGCAAATATAATTGGGCTTCCTTCTGTGGACCTATTGGGCCTGTTGGCAAAGCTGCATGTGGCAAGTGCTTAAATGTGACAAATAGAGAAAATAGAAATACGACCTCCCAAATAGTAAGAATTGTTGATAAGTGTAACAATGGAGGTCTTGATTTGGATATTACTGTATTTCAAAAGCTTGACACCTTTGGGAACGGTAAAGCTCAAGGTTACCTAATGGTGGATTATGAATTTGTGGATTGTGGTATTAAAAATTGCAATAATTGTGGTCCTTTTCTGAACGTGTCAACTCCGAAACATGCACCAAAGCCAACAACACTCTTAGACTCGGTGTCGGTGGTTCCAAGCGTCTCGGTCTCACCAAAATGCAGGAAAAACCAGTTTGCAAGAAATTGTAGTGGCAATATCAGTAAAAATAGCTCAATTCGATTATCTCCGACACCGGCGCCGGCACCAACACCAACATTCTTACCTATTCCTTCATCACAAGGTCCTGATGTTGTTTGCAATAGCACACATTGTAGCGTCGACAATAGGTCAGTTACACTTCCGCCAACATCCTTACCGCCTAGTCCTTCGTCAAATTTTCCTCTACAATTTCATCGTACTACAAACGGTGGTCACTCTAGTTGGAGAACAAAAGTCGTTATAGGTGTTGGAAGTGTAGTAATGGCAGCATTGTTGATGTGTATCACAATTTGTTGTTTTCGAGGAAAATTTCGGTATAGGACAAAGAATGATATAAATATTACAGCATTTTTAAAAGATCATGGAGCTCTAATGCAAAAACGATATAAATTTTCAGAAATAAAGAAATTGACAAATTCATTCAAGGTTAAACTTGGTCAAGGGGGTTTTGGTGTTGTGTATAAAGGAAAGTTACTCAATGGTTCACATGTGGCCGTAAAGATATTGAATGCATCAAAAGGAAATGGTGAAGAATTTATTAATGAGGTTGCTAGTATTACTAGAACCTCTCATGTTAATATTGTCACCCTTCTTGGATTTTGTTTTGAAGGTAACAAAAAAGCTCTCGTATATGAATTTATGCCTAATGGTTCTCTTGACAAATTTATTTACAATAAGGGACTGGAAACCATTGCATCTTTGAGTTGGGATAAACTGTATGAAATTGCCAAAGGGATAGCTCGTGGATTAGAGTACTTGCATAGAGGATGTACCACTCGAATTTTACATTTTGATATAAAACCACATAACATTCTTTTAGATGAGAATTTTTGCCCAAAGATTTCAGATTTTGGTCTTGCAAAGCTATGCCCAAAGAAAGAGAGCATTATTTCGATGTCAGATGCTAGAGGGACAATGGGATATGCAGCTCCAGAATTGTGGAATAGACATTTTGGAGGAGTTTCACACAAGTCTGATGTTTATAGTTATGGAATGATGTTGTTGGAAATGGTTGGAGGGAGAAAAAACATTAATGCTGATGCAAGTCATACGAGTGAGATATACTTTCCTCATTGGGTATACAATAGGCTTGATCTTGGTAGTAATTTAAGACCTGATGGGATATTGGATACAGATGACGACGAGATTGCAAGGAGAATGATCATTGTGGGTTTATGGTGCATTCAAACATTTCCTAGTGATAGGCCTACAATGAGTAAAGTGATTGAAATGTTAGAAGTTAACATGAACTCGTTACAAATACCACCAAAACCACTGCTTTCTTCGCCTACTAGATCAATATCGGAGTCTTCCAAGACTTAA 1926 0.378 MSKQLFLLHKVLIFCVLALASAQSASNVKATYQLFNSEKSNNKWDLNTSNVFCAAQDGNKPLSWRSKYNWASFCGPIGPVGKAACGKCLNVTNRENRNTTSQIVRIVDKCNNGGLDLDITVFQKLDTFGNGKAQGYLMVDYEFVDCGIKNCNNCGPFLNVSTPKHAPKPTTLLDSVSVVPSVSVSPKCRKNQFARNCSGNISKNSSIRLSPTPAPAPTPTFLPIPSSQGPDVVCNSTHCSVDNRSVTLPPTSLPPSPSSNFPLQFHRTTNGGHSSWRTKVVIGVGSVVMAALLMCITICCFRGKFRYRTKNDINITAFLKDHGALMQKRYKFSEIKKLTNSFKVKLGQGGFGVVYKGKLLNGSHVAVKILNASKGNGEEFINEVASITRTSHVNIVTLLGFCFEGNKKALVYEFMPNGSLDKFIYNKGLETIASLSWDKLYEIAKGIARGLEYLHRGCTTRILHFDIKPHNILLDENFCPKISDFGLAKLCPKKESIISMSDARGTMGYAAPELWNRHFGGVSHKSDVYSYGMMLLEMVGGRKNINADASHTSEIYFPHWVYNRLDLGSNLRPDGILDTDDDEIARRMIIVGLWCIQTFPSDRPTMSKVIEMLEVNMNSLQIPPKPLLSSPTRSISESSKT* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0270 641 Gene3D Phosphorylase Kinase; domain 1 304 414 - -
Tpr5g0270 641 SUPERFAMILY Protein kinase-like (PK-like) 327 615 IPR011009 -
Tpr5g0270 641 SUPERFAMILY Barwin-like endoglucanases 24 147 IPR036908 -
Tpr5g0270 641 CDD STKc_IRAK 346 614 - -
Tpr5g0270 641 ProSitePatterns Barwin domain signature 2. 139 146 IPR018226 GO:0042742|GO:0050832
Tpr5g0270 641 Gene3D - 23 147 IPR036908 -
Tpr5g0270 641 ProSiteProfiles Barwin domain profile. 23 148 IPR001153 GO:0042742|GO:0050832
Tpr5g0270 641 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Tpr5g0270 641 SMART serkin_6 340 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0270 641 PANTHER RUST RESISTANCE KINASE LR10-RELATED 276 640 IPR045874 GO:0004672
Tpr5g0270 641 ProSitePatterns Barwin domain signature 1. 85 93 IPR018226 GO:0042742|GO:0050832
Tpr5g0270 641 ProSiteProfiles Protein kinase domain profile. 340 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0270 641 PRINTS Barwin domain signature 60 78 IPR001153 GO:0042742|GO:0050832
Tpr5g0270 641 PRINTS Barwin domain signature 79 97 IPR001153 GO:0042742|GO:0050832
Tpr5g0270 641 PRINTS Barwin domain signature 121 145 IPR001153 GO:0042742|GO:0050832
Tpr5g0270 641 Pfam Protein kinase domain 343 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0270 641 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 276 640 - -
Tpr5g0270 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Tpr5g0270 641 Gene3D Transferase(Phosphotransferase) domain 1 415 622 - -
Tpr5g0270 641 Pfam Barwin family 24 146 IPR001153 GO:0042742|GO:0050832
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0270 Tpr-Chr5 3869097 3917246 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0270 149 638 Receptor kinase-like Gene Family AT5G38280 46.293 7.09e-137 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr5g0270 Pkinase 4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0270 - - gmx:102665158 585.874