Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0268 ATGGCTTCCGATTCCTCTTCTGAAGGTGTTGCTCTTGATCTTGATCCTTCAAAATTTAGTAAATTGAGTATGGAGAGAAAAAGAGAGCTTGTATATGAAATATCTAAAGTGTCTCATGATGGTGCATCCGAGATGCTGCAGTCATGTAGCCGTCAAGAGATTTTGCAAATATTGTGTGCCGAGATGGGAAAAGAAAGGAAGTATACTGGGCTGACAAAGGTGAAAATTATCGAAAATCTTCTAAAAATTGTTTCCGAAAAGAATTCAAGCGGACATGATATTGCCACCGACTCTGAACCACATTCGTTTCCTGCAAACGGTCAGAAACCTGCTAAAAGGCAGAGAAAAACTGAGAATTCATCTCAGTTAGCTATTCCTGCAAACAATGTTTTAGTCAATAATGGTGACACCGTGAGTAATAATACCATATACTGCAAAAACTCAGCATGCAAGGCTACCCTAAATCAAGCAGATGCATTTTGCAAAAGATGTTCATGTTGTATTTGTCATCAATATGATGACAACAAAGACCCTAGCCTGTGGTTAATATGCAGCTCTGAAGCTCCATTTCCCGGTGTTTCCTGTGGCTTGTCATGCCACCTTGAGTGTGCTTTAAAACATGCTGGTTCTGGAATTGGCAAAGACGGTGAACATCGGAAGCTTGATGGAGGCTTCTACTGTGTCTCATGTGGGAAAGTAAATGATTTACTTGGATGCTGGAGAAAACAACTGATGGTAGCAAAGGATGCCAGACGAGTGGACATACTATGTTATCGTGTTTCCTTAAGCCAAAAACTTTTACAAGGGACTGAAGTGTATGGAGAACTTTATGAAATTGTTGATCAAGCAGTGAAGAAACTTGAACAGGAGGTGGGTCCACTGACTGGCTCACCACTGAAGATTGGTAGGGGGGTTGTGAACAGGCTTTCTTCAGGACCTGAGGTTCAGAAACTTTGTGGTGTTGCTCTTGAATCACTTGATTCAATGCTTTCTAAAAGGATCTTGCCTCTGACGCCCAATCCAACTATTCAAGATGCAAGTTTACTAGTGCCAAATATGGTGAGGTTTGAAGATGTCACTGCAACATCCCTCACTGTTATTTTGTGTTTGGAAGATCCTTCTGGAGAAAATAATGCTGGTTACGCCGTGTGGCATCACAAAGCTGATGATGTGAACTATCCATTGAACCCAACTTGCACGAATCTCCTACCAAATAGAAGACTCGACATCAGGGATTTACTTCCAGCTACAGAATACAGTTTCAAAGTTGTTTCCAATGATTTGAGGAAGTCGGGTATGTGCGAAGTTCAAGTCACAACAGAGCATGGTGAGGATGAAGTCCCAAATTGTTCAGCAACGGAAAGAAGTCAGAGCCCAGTAACCAACTGTAGCAGTCTTTCCAATCCATCATCAGTGGAAGATGAAACTAATCATAGCGACCAAACTGATAATCGATCAGATAATTATCCTATTTATCACAAGGATAGCAACCAGCTTGCTTCTAGAAATCTATCTAATGATGCTATTAACTGTTCCCATTTGGGCGGAGTGGGATGTCCCACTGATGCAGATTCCTTGTCAGACAAACAGGTTGCTGTAGGAATGACTGACACTATACCTAGTTCTGATGCATTCAAGCTTGAAAACAAGCATTCGGCAGAGGAACAAGTAACCAAGGACACGAGCACTGATGATGGGTCAATTCCAACGGGAAGGGAATGTGTTCCGTTAACAGGTAGCTCAAAAAGGGGATTTCCTAATACTCCCGGCAGGTTGGAATTACTTAAAGATGGTCCCAGAAGAAAAGGTAGATCCAAAGTCGGTGGAAAAGATGTAGAAAATGGATCTGGGAAAAGGAGTGGCCCTCGAGATGGAAGCAAATCCAAGAAGAGAAGTGGTGAAAGGCAAGACGAGGGCTGTGAGGGCAATGGTTTTCCAGATCGGGGTTTTGAGTATTATGTGAAGGTGATTAGATGGTTAGAGTGTGAAGGACACATTGAAAAGAACTTCAGACAGAAATTTCTGACTTGGTACAGCTTAAGAGCAACCCCTGAAGAAAGAAGGATTGTGAAAATATATGTAGATACATTTCACGAAGATCCGGCTTCTCTTGCTGAGCAACTTGTGGACACCTTCTCAGATTGTGTATCAAACAAGAGATCATCAGTTCCTGCAGGGTTCTGCTTGAAGCTTTGGCATTGA 2202 0.4214 MASDSSSEGVALDLDPSKFSKLSMERKRELVYEISKVSHDGASEMLQSCSRQEILQILCAEMGKERKYTGLTKVKIIENLLKIVSEKNSSGHDIATDSEPHSFPANGQKPAKRQRKTENSSQLAIPANNVLVNNGDTVSNNTIYCKNSACKATLNQADAFCKRCSCCICHQYDDNKDPSLWLICSSEAPFPGVSCGLSCHLECALKHAGSGIGKDGEHRKLDGGFYCVSCGKVNDLLGCWRKQLMVAKDARRVDILCYRVSLSQKLLQGTEVYGELYEIVDQAVKKLEQEVGPLTGSPLKIGRGVVNRLSSGPEVQKLCGVALESLDSMLSKRILPLTPNPTIQDASLLVPNMVRFEDVTATSLTVILCLEDPSGENNAGYAVWHHKADDVNYPLNPTCTNLLPNRRLDIRDLLPATEYSFKVVSNDLRKSGMCEVQVTTEHGEDEVPNCSATERSQSPVTNCSSLSNPSSVEDETNHSDQTDNRSDNYPIYHKDSNQLASRNLSNDAINCSHLGGVGCPTDADSLSDKQVAVGMTDTIPSSDAFKLENKHSAEEQVTKDTSTDDGSIPTGRECVPLTGSSKRGFPNTPGRLELLKDGPRRKGRSKVGGKDVENGSGKRSGPRDGSKSKKRSGERQDEGCEGNGFPDRGFEYYVKVIRWLECEGHIEKNFRQKFLTWYSLRATPEERRIVKIYVDTFHEDPASLAEQLVDTFSDCVSNKRSSVPAGFCLKLWH* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0268 733 MobiDBLite consensus disorder prediction 91 121 - -
Tpr5g0268 733 MobiDBLite consensus disorder prediction 547 561 - -
Tpr5g0268 733 Pfam PHD - plant homeodomain finger protein 145 264 IPR032881 -
Tpr5g0268 733 MobiDBLite consensus disorder prediction 543 641 - -
Tpr5g0268 733 MobiDBLite consensus disorder prediction 439 490 - -
Tpr5g0268 733 PANTHER VIN3-LIKE PROTEIN 2-RELATED 14 733 IPR044514 GO:0010048|GO:0040029
Tpr5g0268 733 MobiDBLite consensus disorder prediction 594 641 - -
Tpr5g0268 733 SUPERFAMILY Fibronectin type III 351 425 IPR036116 GO:0005515
Tpr5g0268 733 MobiDBLite consensus disorder prediction 444 475 - -
Tpr5g0268 733 CDD FN3 351 424 IPR003961 GO:0005515
Tpr5g0268 733 CDD PHD_VIN3_plant 165 230 - -
Tpr5g0268 733 MobiDBLite consensus disorder prediction 476 490 - -
Tpr5g0268 733 PANTHER VIN3-LIKE PROTEIN 2-RELATED 14 733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0268 Tpr-Chr5 3837382 3848319 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0268 4 611 PHD Gene Family AT4G30200 46.625 1.70e-153 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0268 - - gmx:100794721 1175.61