Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0266 ATGAGTGCTACACCAAACACAGAGTCACAGACTAATCATAATATAACATCCTTCTTTTCTAGTAGCAAGAAAAAGAAAAAAAAAACTTCCTTCTTTTCTTCCTTGTTTGTTATCAACATAATGGATAATAATAATAATCATAATCATATCCTTATGTTCTCAAATATTACATACATCTCCTTCTTTGTAATAGTAATAATAATAATCACTTTTTTTCCAACACAATCCCACTCTCAACCACAACAACCTCAATCAGTTAACAATTATTCAAGTTGTGCAGAATCCTACTCCTACAACTGCGGTAGCATCTCCGACATCTCTTATCCATTCTGGGGACAAGATCGTCCTTCTTACTGCGGTGCCGGCAAACTTTTTTACCTTAACTGCTACAATAACAGCATTACTACCATTCAATTATTCTCACAAAACTTTACAGTACTTGATATTTACACACAAATTCATACCATGGTACTAAAAAGAACAGATCTTTCACAAAATCTCTGTTCTCCTCAATTTAATGATACTCATTTCAATCCAACTTTGTTTCAATATCCACAACAAATTGTCAACAACATCACCATATATTATAATTGTAATTCCACTGTCTCTCAATATATACTTGAAAATTCTCTATGTGGATCTCTCAACCCTTCTTTCTGTTATACCGGCGGCGATGGTGATGAGCAAGATGGATTGTTAAGGAATTGCAAGAAACATATTCAAGTGCCAGTGGGACTAGATTTTCCTATAAAGGAAGATTATTATGGTTATTTTAAGCGTGATGTTCTTGAAAGTGGTTTGAACAAAGGATTTGAGTTGAAGTATAGTGTGAATCAGGAATGTTTAAGTTGTTTGGGAAATAGTGAAATACTAGTAGAAAATTGTACATTGAAAAACAATAATGATATAGAGAAACTTGCAGTGTCTTCTTGCTATTATGATAATTGTCTATCTGGATCCAATGTTTTTCCCACAAACTGTTCTCCTCTTCACAAAAATAGTAAGCCGTTAAGCTGGCAAAGGAAAATGAAAGCTATCGCAGGAAGTGCAAGTGGAACATTTGTTGGATTATCGATATGTATCATTATCATTTATTTCATATACAAGTTCATAAAGAATAATCAAGAGATCACAAATTCTGATAAAGGCATTGAAGCATTCTTAAAAACTCATGAAGGATTTACCATAAGAAGATACAAATTCTCAGATATAAAGAAAATGACCAACAACTTTGAAGTCAAACTAGGACAAGGTGGCTATGGTACTGTATACAAAGGAAAGCTAATCAACGACCGCCTTGTGGCCGTAAAGATATTGAATGCATCCAAAGGAAATGGTGAAGATTTTATGAATGAGGTTTCTAGCATTACTAAGACCTCTCACATTAATGTTGTTGCCCTTCTTGGATTTTGTTTTGACCGTCGCAAAAAAGTTTTGATATATGAATTAATGTCCAATGGTTCGCTTGATAAATTTATTTACAACAACCAACCTGGAGCCATTCAATCTCTGAGTTGGGAGATTCTTTATCAAATTGCTAAAGGGATAGCTCGAGGTCTAGAATACTTGCATAGGGGATGTAGCACACGAATTTTACATTTTGATATCAAACCACATAACATTCTTTTAGATGAGAATTTTTGTCCAAAGATATCGGATTTTGGGCTAGCAAGACTTTGTCCCAAGAAAGAGAGCATTATTTCAATGTCGGATGCTAGAGGGACAATGGGATATGTAGCTCCTGAATTGTGGAATAGAAATTTTGGAGGTGTTTCACATAAGTCTGATGTTTATAGTTTCGGAATGATGCTGATGGAAATGGTTGGAGGGAGGAAAAATATTATTGCTGATGCAAGTCAAACAAGTGAGATTTACTTTCCTCATTGGGTATACAATAGGCTTGATCTAGGCACTGATTTGATACCGGGCGAAATGATTGCCACAGAAGATGAGATCGCAAAGAGAATGAGCATTGTAGGATTATGGTGCATTCAACCATTTCCAAATGATAGACCTACAATGAGTAAAGTAATTGAAATGTTAGAAGGCAACATGAATTCATTGGAAATACCACCAAAACCTCTCCTTTCTTCTCCTACTAGATCAGTACCATAA 2115 0.3475 MSATPNTESQTNHNITSFFSSSKKKKKKTSFFSSLFVINIMDNNNNHNHILMFSNITYISFFVIVIIIITFFPTQSHSQPQQPQSVNNYSSCAESYSYNCGSISDISYPFWGQDRPSYCGAGKLFYLNCYNNSITTIQLFSQNFTVLDIYTQIHTMVLKRTDLSQNLCSPQFNDTHFNPTLFQYPQQIVNNITIYYNCNSTVSQYILENSLCGSLNPSFCYTGGDGDEQDGLLRNCKKHIQVPVGLDFPIKEDYYGYFKRDVLESGLNKGFELKYSVNQECLSCLGNSEILVENCTLKNNNDIEKLAVSSCYYDNCLSGSNVFPTNCSPLHKNSKPLSWQRKMKAIAGSASGTFVGLSICIIIIYFIYKFIKNNQEITNSDKGIEAFLKTHEGFTIRRYKFSDIKKMTNNFEVKLGQGGYGTVYKGKLINDRLVAVKILNASKGNGEDFMNEVSSITKTSHINVVALLGFCFDRRKKVLIYELMSNGSLDKFIYNNQPGAIQSLSWEILYQIAKGIARGLEYLHRGCSTRILHFDIKPHNILLDENFCPKISDFGLARLCPKKESIISMSDARGTMGYVAPELWNRNFGGVSHKSDVYSFGMMLMEMVGGRKNIIADASQTSEIYFPHWVYNRLDLGTDLIPGEMIATEDEIAKRMSIVGLWCIQPFPNDRPTMSKVIEMLEGNMNSLEIPPKPLLSSPTRSVP* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0266 704 SUPERFAMILY Protein kinase-like (PK-like) 393 682 IPR011009 -
Tpr5g0266 704 ProSitePatterns Protein kinases ATP-binding region signature. 415 437 IPR017441 GO:0005524
Tpr5g0266 704 SMART serkin_6 409 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0266 704 CDD STKc_IRAK 415 683 - -
Tpr5g0266 704 Pfam Wall-associated receptor kinase galacturonan-binding 94 159 IPR025287 GO:0030247
Tpr5g0266 704 ProSiteProfiles Protein kinase domain profile. 409 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0266 704 Gene3D Transferase(Phosphotransferase) domain 1 484 690 - -
Tpr5g0266 704 Gene3D Phosphorylase Kinase; domain 1 385 483 - -
Tpr5g0266 704 Pfam Protein tyrosine and serine/threonine kinase 412 681 IPR001245 GO:0004672|GO:0006468
Tpr5g0266 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672|GO:0006468
Tpr5g0266 704 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 140 703 - -
Tpr5g0266 704 PANTHER RUST RESISTANCE KINASE LR10-RELATED 140 703 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0266 Tpr-Chr5 3825504 3830658 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0266 95 703 Receptor kinase-like Gene Family AT1G66910 37.422 2.05e-129 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr5g0266 PK_Tyr_Ser-Thr 6.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0266 - - gmx:106794113 641.728