Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0265 ATGGATAATCATGTCCCTATGTTTCAAAGTATTACATACATCTCCTTCTTCTTATTAATAATAATCACTTTTTTTCCATCACAATCTCTTTCTAACGATTATTCATATTGTAATAAATATCCCTACGACGACAGATCCTCCTATAGTTGCGGAAATCTCTCCAACATCTATTATCCATTCTGGGGACAAAATCGTCCTTCTAAATGTGGCGCCGGCAAACCATTTTACCTTAACTGCGACAAAAACAACATTACTACCATTCTATTATACTCACAAAATTTCACAGTACTTGATATCAACACCACATCCTACACCATGAAACTCAAAAGAACAGACCTTTCCCAAAATCTCTGTTCTCCACAATTTGGTGAAACTTATTTCGATCCAACTGGTCTGTTTCATTCTAGCTCAATGGACATCAGCATATACTACAATTGTCCTTTCAATATATCTTATCAAAAATCTCTATGTGGATCTAACAATCCTTCTTTCACTGATCTTAACTTTGAAGTTGCAAAAAATTTATATCTAAATAGATGTGGGAAACATATCAAAGTGCCGAGAACAATAGATTTGTATAAAGAGATTGATTATAATTACAATCGTGACGATCTTGAAAGAATTTTGAATGACGGGTTTGAGGTGGAATACTCTGTGAATACCGATTGTTTAAGGTGTTTGGGAAGTGAGAATGGAGATTGCTCGAGTTATTATATTGATAATAAAAATATTGACTTATGCTATTATGATTATTGTCCAGATGGATCTATTGCTATTCCCATAACTTGTATTACTTACAAAAGTAGTAAGCACTCTATATGGCAAGGGAAAATAATCACTCTAGGAAGTGCAAGTGCAACATTTGTTGGATTTTCGATATGTGTCATTATCTTTTATTTCACAAACAAGTTCATAAAGAATAACCAAAACATCACATATGAAAACAACAAGAATAACCGAGACATTGAAGCATTCTTAAAAACTCATGAAGCTTTTACCGTAAGAAGATACAAATTCGCAGATATCAAGAAAATGACCAACAACTTCGAAGTCAAACTAGGACAAGGTGGTTATGGCATTGTGTACAAAGGAAAGCTACTCAATGACCGCCTTGTGGCCGTCAAGATATTGAATGCATCCAAAGGAAATGGTGAAGAATTTATGAACGAGGTTTCTAGCATTACTAAAACCTCTCACATTAATGTTGTTGCGCTTCTTGGATTTTGTTTTGATGGTAGCAAAAAAGCTTTGATCTATGAATTAATGTCCAATGGTTCACTTGACAAGTTTATTTACAACAATCAACCTAAAGCCATTCAATCTCTGAGTTGGGAGATTCTTTATCAAATTGCTAAAGGGATAGCTCGAGGGCTAGAGTACTTGCATAAGGGTTGTAGCACACGAATTTTACATTTTGACATCAAACCACATAACATTCTTTTAGATGAGAATTTTTGTCCAAAGATATCGGATTTTGGGCTAGCAAGACTTTGTCCCAAGAAAGAGAGCATTATTTCAATGTCAGATGCTAGAGGGACAATGGGATATGTAGCTCCTGAGTTGTGGAATAGAAATTTTGGAGGTGTTTCACATAAGTCTGATGTTTATAGTTTCGGAATGATGCTGATGGAAATGGTTGGAGGACGGAAAAATATTATTGCTGATGCAAGTCAAACAAGTGAGATATACTTTCCTCATTGGGTTTACAAGAAGCTTGATCTAGGCACTGATTTGATACCAGGTGAAGTTATTACCGTTGAAGAAGGTGAAATTGCAAAGAGAATGACTATTGTAGGATTATGGTGCATTCAAACATTTCCAAATGACAGGCCAACAATGAGTAGAGTAATTGAAATGTTAGAAGGCAATGTGAATTCATTAGAAATACCACCAAAACCTATTCTTTCTTCTCCTACTAGATCAGTGCCAGGATCTTCAACTTCTTGA 1947 0.3503 MDNHVPMFQSITYISFFLLIIITFFPSQSLSNDYSYCNKYPYDDRSSYSCGNLSNIYYPFWGQNRPSKCGAGKPFYLNCDKNNITTILLYSQNFTVLDINTTSYTMKLKRTDLSQNLCSPQFGETYFDPTGLFHSSSMDISIYYNCPFNISYQKSLCGSNNPSFTDLNFEVAKNLYLNRCGKHIKVPRTIDLYKEIDYNYNRDDLERILNDGFEVEYSVNTDCLRCLGSENGDCSSYYIDNKNIDLCYYDYCPDGSIAIPITCITYKSSKHSIWQGKIITLGSASATFVGFSICVIIFYFTNKFIKNNQNITYENNKNNRDIEAFLKTHEAFTVRRYKFADIKKMTNNFEVKLGQGGYGIVYKGKLLNDRLVAVKILNASKGNGEEFMNEVSSITKTSHINVVALLGFCFDGSKKALIYELMSNGSLDKFIYNNQPKAIQSLSWEILYQIAKGIARGLEYLHKGCSTRILHFDIKPHNILLDENFCPKISDFGLARLCPKKESIISMSDARGTMGYVAPELWNRNFGGVSHKSDVYSFGMMLMEMVGGRKNIIADASQTSEIYFPHWVYKKLDLGTDLIPGEVITVEEGEIAKRMTIVGLWCIQTFPNDRPTMSRVIEMLEGNVNSLEIPPKPILSSPTRSVPGSSTS* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0265 648 SUPERFAMILY Protein kinase-like (PK-like) 329 621 IPR011009 -
Tpr5g0265 648 SMART serkin_6 347 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0265 648 Gene3D Transferase(Phosphotransferase) domain 1 422 629 - -
Tpr5g0265 648 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 2.4 26 633 - -
Tpr5g0265 648 Pfam Protein tyrosine and serine/threonine kinase 350 620 IPR001245 GO:0004672|GO:0006468
Tpr5g0265 648 ProSiteProfiles Protein kinase domain profile. 347 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0265 648 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Tpr5g0265 648 PANTHER RUST RESISTANCE KINASE LR10-RELATED 26 633 IPR045874 GO:0004672
Tpr5g0265 648 CDD STKc_IRAK 353 622 - -
Tpr5g0265 648 Pfam Wall-associated receptor kinase galacturonan-binding 49 109 IPR025287 GO:0030247
Tpr5g0265 648 Gene3D Phosphorylase Kinase; domain 1 320 421 - -
Tpr5g0265 648 Pfam Wall-associated receptor kinase C-terminal 172 249 IPR032872 -
Tpr5g0265 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0265 Tpr-Chr5 3821030 3824085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0265 5 647 Receptor kinase-like Gene Family AT1G66910 36.960 4.14e-142 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr5g0265 PK_Tyr_Ser-Thr 2.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0265 - - gmx:100792936 687.952