Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0263 ATGGCTACTAAAAGGTTTTTTGATGATTCTGATGATCAAGATCAAGATCAAGATCAAGATAATTCAAACGGCAAACGAATGAAACCTACTACACCTTCTTTAGCTTCTGTAATAGTTAAAACAATTAAAATGCAAAACATGGAGAACCTTTTAGCTGCAGCCTTGGAACCCTTGCTTAAAAGAGTGGTGAGTGAAGAAGTGGATAAAGCATTGGGAAGGTGTTTTCCATGTTCCATCAATAGGTCACCTTCATTAAGAATCCAAGCCCCAAGTGATCAACCACCAACCTTACAACTCTCATTCAACAAAAGACTTTCCCTCCCAATTTTCACAGGTAGTAGAATACTTGACAATGAAGGTAACCCCATCAACATAACTCTTGTTGAAAAAACCAACAATAACCAAATTGTCCCAACAAGTCTTCCTTACCCTATAAAGCTAGAGATTGTTGTTCTTGATGGAGATTTTCCACATGATGAAAATGAAAATGAAAATTGGACTAATGAGGAATTCAATAAATACATAGTAAAGGAAAGAGCTGGGAAAAGACCATTGCTTGGTGGAGAAATGAACATTACTATGAGAGATGGAATTGCACCAATTGGGGACATAGAATTCACTGATAATTCTAGTTGGATAAGGAGTAGAAAATTTAGAGTTGCAGTGAAAGTGAGTCATCATGGGAGTAATCAAAGTGTTAGGATTCAAGAAGGAATGACTGAGGCATTTAAAGTTAAGGATCATCGTGGAGAATTGTACAAAAAGCACCACCCACCAAAGCTTGAGGATGATGTATGGCGCCTAGAGAAAATTGGGAAAGATGGAGCTTTTCATAAGAAAATGACTGATAAAGGGATCAAAACAGTGCAAGATTTCCTCAAATTAGCAGTTATGGATACTCATAAGCTAAGAGAGATTTTGGGCATGGGGATGTCAGATAAAATGTGGGATGTAACAATAAAGCATGCAATGACCTGTGAAATGGGGAGCAAGATCTATATATACCGTGGACCTCAATTTGTTATTGTTTTGAATCCAATTTGCAAATTAATTAAAGCTAATATCAATGGACAAGAATTTTCCAATAGAGAGATGAGACAAATCAATAAGAGCTATATAGACATGTTGGTGAGAGAAGCATACACAAAATGGCATGAGTTGGAGGAAATTGATAGAGTTTTAAATGATAACATTGCTTTGTTAACCCAAGGTGATCAAACTGGGGAACATTATCCAATCAATCATCCAGCAACATTGGTAACACCATATCATCAAAATGGTTACTATGGTGACAAATCTACTGAGAATATTGGTAGCTATGTACCAATCAATAATGCACAAATGGGAGGCTCTTCTGAGTGGTCAATATTGAATCAAGGCTATAATACCACAACAACATTTCTAAATGGATATCCTTTTGGCTTCTCAGGTTCACAATCAGATGGAGACATAACACCTTCAAGTTCAGGCTCTAGGGACATCAATGGTGCCACAAGGCAACTTTAG 1506 0.3692 MATKRFFDDSDDQDQDQDQDNSNGKRMKPTTPSLASVIVKTIKMQNMENLLAAALEPLLKRVVSEEVDKALGRCFPCSINRSPSLRIQAPSDQPPTLQLSFNKRLSLPIFTGSRILDNEGNPINITLVEKTNNNQIVPTSLPYPIKLEIVVLDGDFPHDENENENWTNEEFNKYIVKERAGKRPLLGGEMNITMRDGIAPIGDIEFTDNSSWIRSRKFRVAVKVSHHGSNQSVRIQEGMTEAFKVKDHRGELYKKHHPPKLEDDVWRLEKIGKDGAFHKKMTDKGIKTVQDFLKLAVMDTHKLREILGMGMSDKMWDVTIKHAMTCEMGSKIYIYRGPQFVIVLNPICKLIKANINGQEFSNREMRQINKSYIDMLVREAYTKWHELEEIDRVLNDNIALLTQGDQTGEHYPINHPATLVTPYHQNGYYGDKSTENIGSYVPINNAQMGGSSEWSILNQGYNTTTTFLNGYPFGFSGSQSDGDITPSSSGSRDINGATRQL* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0263 501 Pfam Calmodulin binding protein central domain 261 326 IPR046830 -
Tpr5g0263 501 PANTHER OS02G0177800 PROTEIN 1 492 IPR012416 GO:0005516
Tpr5g0263 501 Pfam Calmodulin binding protein C-terminal domain 331 390 IPR046829 -
Tpr5g0263 501 MobiDBLite consensus disorder prediction 480 501 - -
Tpr5g0263 501 MobiDBLite consensus disorder prediction 1 32 - -
Tpr5g0263 501 Pfam Calmodulin binding protein-like N-terminal domain 97 248 IPR046831 -
Tpr5g0263 501 PANTHER PROTEIN, PUTATIVE-RELATED 1 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0263 Tpr-Chr5 3804696 3810082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0263 4 391 Calmodulin-binding Proteins AT4G25800 45.939 2.46e-110 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0263 - - aip:107644281 608.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0263 5 3804696 3810082 Tpr5g0263 5 3804696 3810082 ECH
Tpr3g0345 3 3736324 3739364 Tpr5g0263 5 3804696 3810082 PCT