Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0257 ATGGCGACGCCGTTAATCCCGCAGCAGCTCTTAGACGGCGGTGGAGGAGTGGCGGTTCTGTCGAATCTCGTTCCTTCTTCTTCTGCTTCTTCCTCCTCCAATGGTGGTGGTGGATTCAACCGTTCCTCTTTATCGGAATCGCCAATTTTGATTTTCTCGTTCTTCCAAAAAGCGATTCGGAACGAGCTTGATGCGTTGCATAGATTAGCTTTGGCTTTTGCTACTGGAAATCGTTCCGATATTCAACCTCTCTCTGAACGCTACCATTTTCTTAGATCGATGTATAAACACCATTCCAATGCTGAAGATGAGGTGATTTTTCCAGCTCTAGATAAGCGTGTGAAGAATGTAGCACAGACATATTCCCTTGAACACAAGGGTGAAAGCAATCTTTTTGACCATTTATTTGAGCTTTTAAACTCTCCTGATGATAATGATGAAAGTTTCCGAAGGGAGTTAGCGTCCTGCACTGGAGCTCTGCAGACATCTGTTAGTCAACACATGGCTAAGGAGCAGCAGCAAGTGTTTCCGCTTCTTATTGAGAAGTTCTCACTGGAGGAACAAGCATCTTTAGTTTGGCAATTTCTTTGCAGTATTCCAGTGAATATGATGGCCGAATTTCTTCCATGGCTTTCCACATCCATATCACCCGATGAATCTCAGGATTTACGGATGTGCTTAAGCAAGATAGTGCCAGAAGAAAAGCTTCTTCAAAAGGTTATTTTCACCTGGATGGATGGGAGAAGTAGTGCTAACACAGTTGAAAATTGTGTAGATCATTCTCAGGTTCAATGTAGGCCTAGTCCTTTAGCCCATCAGATTGGGAAAACAAATTGTCCATGCGAGTCCATTATATCTGGGAAAAGAAAATATTCTGCATCTATTCTAGATGTTCCTGAGACAATGGGTTCACATCCTATAGATGAAATATTGCTCTGGCATAATGCTATAAAAAAAGAGTTGAATGAAATAGCAGTGGAGACCAGAAAGATACAACACTCTGGAGATTATACTAATCTGTCTGCTTTTAATGAAAAGCTGCAATTCATTGCTGAAGTTTTCATATTTCACAGTATTGCTGAGGACAAGATTATTTTTCCGGCAGTAGATGGAGATTTTTCTTTCTTTCAGGAACACGCTGAAGAAGAAAGTCAATTTAATGACTTCCGATCTTTGATTGAAAGAATTCTAAGTGAAGAAGCAACATCTAGTTCAGAAGTTGAACTTTATTCCAATTTGTGCTCACATGCTGACCATATAATGGAAACCATACAGAGGCATTTCCATAATGAAGAAGTTCAGGTTCTTCCACTTGCACGGAAGCACTTTAGCTTCAAAAGGCAACGGGAACTAGTATATCAAAGCTTGTGCATGATGCCTCTGAAATTGATTGAGCGTGTCCTGCCATGGTTTGTTGGATCATTAACTGAAGTTGAAGCAGAGATATTTCTGAAAAACATACAATTGGCAGCTCCAGCAGTCGATTCTGCTTTAGTCACACTCTTCTCTGGTTGGGCTTGCAAGGCTCGTAAAAATGGTCAGTGCTTATCTTCAAGTGCATCAGGTTTCTGTCCTGCTAAAAAAATTGTCCGGTCTTCCTGTACTTGTCCTTCTGCATTGTCTGGTAAAGATTGCCCAATATTAGCTGAATCAGATGGGACCCAAAGATCAGTGAAGCGAAACATATTGGAGTTGCACAAAAATGGAGATGTCTCAAAAACACAAGAAAATGAATGTACCCAGAAACCATGCTGTGGTGCCCGGTCTTGTTGTGTGCCAGCATTAGGGGTCAACAGTAACAATTTGGGGCTGAGTTCACTTTCTGCTGCCAAGTCCTTAAGGAGCTTCACTTCTTCCGCCCCATCTCTTAATTCTAGTCTTTTCATATGGGAAACAGACAGCAGCTCATGTGATGTTGGCTCTGCAGAAAGACCAATTGATACCATATTTAAATTCCATAAAGCTATACGCATAGATCTGGAGTATTTAGATGTTGAATCTGGAAAGCTTTGTGATGGTGATGAAACAACTATTCGGCAATTTACTGGAAGATTTCGTCTTTTGTGGGGTTTATATAGAGCTCACAGTAATGCTGAAGATGATATAGTTTTTCCAGCATTGGAATCCAAAGAGACACTTCATAACGTGAGTCACTCATACACGCTGGACCATAAGGCAGAGGAAAAGTTATTCGAAGATATTTCTTGCGTTCTTTCTGAGCTTTCAGTCCTTCATGAAGCAATGCAGACCCATATGTCAGAGGATTTAAGCGAAAGTAATTTGGGAATATCTGATGCCAATGATAGTGATGATATCAGAAAGTACAATGAGCTTGCAACTAAGCTTCAAGGGATGTGTAAATCTATACGAGTGACCCTGGATCAGCATATTTTCAGGGAAGAGCTCGAGCTCTGGCCATTGTTTGGAAAACATTTTACTGTGGAAGAACAAGACAAGATAGTGGGCCGAATAATTGGAACTACAGGGGCTGAAGTTCTCCAATCAATGTTACCATGGGTGACTTCTGCACTTACCCAAGATGAACAGAACAAAATGATGGACACATGGAAACAAGCAACTAAGAATACAATGTTTAATGAGTGGCTAAATGAATGCTTGATAGAGAGCCCAGGATCTACATCACAGACAGAAACATCAGATCGTAGCACTTCTCAAAGAGGAGCGGAATATCAAGAAAGCTTGAACCTGAATGATCAGATGTTTAAGCCGGGTTGGAAAGACATATTCCGGATGAATGAGAATGAAATTGTATCTGAAATCCGGAAGGTTTATCGTGACTCAACCCTTGATCCAAGGAGAAAGGCATATCTGGTGCAGAATCTAATGACAAGTCGCTGGATAGCTGCCCAACAGAAGTTACCTAAATCTCAATCTGGAGAATCATCGAATAAACAAATAGAAGGATACTTACCTTCATTTCGGGACCCAGAGAAACAAGTATTTGGCTGTGAACACTATAAGAGAAATTGCAAAATTCGAGCTGCTTGTTGTGGCAAGTTATTTACATGCAGATTTTGTCATGACAACAATTCAAGTGATCACTCAATGGATAGAAAAGCAACATTAGAAATGATGTGTATGGCCTGCATGACTATACAGCCAGTTGGGCCCATATGCACGACGCCTTCATGTAATGGACTTTCAATGGCAAAGTACTACTGTAACATTTGCAAATTTTTTGACGATGAAAGGAATGTTTACCATTGCCCATTTTGCAATATATGCCGTGTTGGACAAGGGCTTGGCATTGATTACTTTCATTGTATGAAATGCAATTGTTGCGTGGGTATTAAGTCAGTGTCTCACAAGTGCCTGGAGAAAGGCTTAGAAATGAACTGCCCAATTTGCTGTGACGACTTGTTCACATCAAGTGCAACAGTCAGAGCTCTAGCTTGTGGTCATTACATGCATTCATCTTGTTTTCAGGCATACACTTGCAGTCACTACACATGTCCAATCTGCAGCAAGTCATTGGGAGATATGGCGGTTTACTTCGGTATGCTTGATGCATTGTTGGCTGCTGAGCAGCTTCCTGAAGAGTACAGGGACCGCTCTCAGGACATACTCTGCCATGACTGTGATCGAAAGGGAACTTCACACTTCCACTGGTTATATCATAAATGTGGATTTTGCGGCTCATACAATACCCGGGTGATCAAGAGCGAGACAACAAATTCCAGCTGCCCTTGA 3711 0.4134 MATPLIPQQLLDGGGGVAVLSNLVPSSSASSSSNGGGGFNRSSLSESPILIFSFFQKAIRNELDALHRLALAFATGNRSDIQPLSERYHFLRSMYKHHSNAEDEVIFPALDKRVKNVAQTYSLEHKGESNLFDHLFELLNSPDDNDESFRRELASCTGALQTSVSQHMAKEQQQVFPLLIEKFSLEEQASLVWQFLCSIPVNMMAEFLPWLSTSISPDESQDLRMCLSKIVPEEKLLQKVIFTWMDGRSSANTVENCVDHSQVQCRPSPLAHQIGKTNCPCESIISGKRKYSASILDVPETMGSHPIDEILLWHNAIKKELNEIAVETRKIQHSGDYTNLSAFNEKLQFIAEVFIFHSIAEDKIIFPAVDGDFSFFQEHAEEESQFNDFRSLIERILSEEATSSSEVELYSNLCSHADHIMETIQRHFHNEEVQVLPLARKHFSFKRQRELVYQSLCMMPLKLIERVLPWFVGSLTEVEAEIFLKNIQLAAPAVDSALVTLFSGWACKARKNGQCLSSSASGFCPAKKIVRSSCTCPSALSGKDCPILAESDGTQRSVKRNILELHKNGDVSKTQENECTQKPCCGARSCCVPALGVNSNNLGLSSLSAAKSLRSFTSSAPSLNSSLFIWETDSSSCDVGSAERPIDTIFKFHKAIRIDLEYLDVESGKLCDGDETTIRQFTGRFRLLWGLYRAHSNAEDDIVFPALESKETLHNVSHSYTLDHKAEEKLFEDISCVLSELSVLHEAMQTHMSEDLSESNLGISDANDSDDIRKYNELATKLQGMCKSIRVTLDQHIFREELELWPLFGKHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNKMMDTWKQATKNTMFNEWLNECLIESPGSTSQTETSDRSTSQRGAEYQESLNLNDQMFKPGWKDIFRMNENEIVSEIRKVYRDSTLDPRRKAYLVQNLMTSRWIAAQQKLPKSQSGESSNKQIEGYLPSFRDPEKQVFGCEHYKRNCKIRAACCGKLFTCRFCHDNNSSDHSMDRKATLEMMCMACMTIQPVGPICTTPSCNGLSMAKYYCNICKFFDDERNVYHCPFCNICRVGQGLGIDYFHCMKCNCCVGIKSVSHKCLEKGLEMNCPICCDDLFTSSATVRALACGHYMHSSCFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEQLPEEYRDRSQDILCHDCDRKGTSHFHWLYHKCGFCGSYNTRVIKSETTNSSCP* 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0257 1236 Pfam Zinc-ribbon 1167 1224 IPR039512 -
Tpr5g0257 1236 ProSiteProfiles Zinc finger RING-type profile. 1120 1162 IPR001841 -
Tpr5g0257 1236 SUPERFAMILY CHY zinc finger-like 983 1047 IPR037274 GO:0008270
Tpr5g0257 1236 CDD Hr-like 51 177 - -
Tpr5g0257 1236 Pfam Hemerythrin HHE cation binding domain 57 179 IPR012312 -
Tpr5g0257 1236 Pfam Hemerythrin HHE cation binding domain 645 807 IPR012312 -
Tpr5g0257 1236 Pfam Hemerythrin HHE cation binding domain 305 439 IPR012312 -
Tpr5g0257 1236 SUPERFAMILY Zinc hairpin stack 1057 1112 IPR037275 -
Tpr5g0257 1236 Pfam Ring finger domain 1119 1161 IPR001841 -
Tpr5g0257 1236 SUPERFAMILY RING/U-box 1117 1166 - -
Tpr5g0257 1236 MobiDBLite consensus disorder prediction 876 895 - -
Tpr5g0257 1236 Gene3D nmb1532 protein domain like 641 879 - -
Tpr5g0257 1236 Gene3D nmb1532 protein domain like 308 456 - -
Tpr5g0257 1236 Gene3D nmb1532 protein domain like 47 197 - -
Tpr5g0257 1236 PANTHER CHY ZINC FINGER PROTEIN 29 1236 - -
Tpr5g0257 1236 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1113 1164 IPR013083 -
Tpr5g0257 1236 ProSiteProfiles Zinc finger CTCHY-type profile. 1056 1119 IPR017921 -
Tpr5g0257 1236 SMART ring_2 1120 1161 IPR001841 -
Tpr5g0257 1236 CDD Hr-like 308 437 - -
Tpr5g0257 1236 Pfam CHY zinc finger 990 1066 IPR008913 GO:0008270
Tpr5g0257 1236 Gene3D - 1191 1233 - -
Tpr5g0257 1236 CDD RING-H2_Pirh2 1119 1162 - -
Tpr5g0257 1236 CDD Hr-like 647 806 - -
Tpr5g0257 1236 ProSiteProfiles Zinc finger CHY-type profile. 983 1053 IPR008913 GO:0008270
Tpr5g0257 1236 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 29 1236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0257 Tpr-Chr5 3718444 3727779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0257 1 1235 C2H2 Transcription Factor Family AT3G18290 66.957 0.0 1667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0257 K16276 - gmx:100791354 2126.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0257 5 3718444 3727779 Tpr5g0257 5 3718444 3727779 ECH