Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0252 ATGGACACGACAAAATCTACTACGTCTTGTTTCTTTCTTTCTTTCTGTTTCCTCCACGAATATCGCGTTGACTTTTCTGTTGACCGTACCATGTTCTTCTCCAAATTCTTTTCCTGTTTGCAGAAGTGTCGGAAGAAGCACGGCACTGTCTCCGATGACAACGACGACGACAATGATACCATTGACGCCGTTGATTCTTCTTCAAATCTGTTATTTGAGCTTCATACTCTTCAACTTGCTACCAATTTCTTCTCTGAGCTTAACCAACTTGGTCGTGGAGGATTTGGTCCTGTTTTCAAGGGATTGATGCCAAATGGTGAAGAAGTGGCAATAAAAAAGCTGTCAATGGAATCTAGACAAGGAATTCGTGAATTTATGAACGAAGTTCGGCTATTACTAAGAATTCAGCACAAGAATTTAGTCACTTTACTAGGTTGTTGTGCAGAAGGGCCAGAAAAGATGCTTGTCTACGAATATCTACCAAACAAAAGCCTCGACCACTTTCTATTTGATAAAAAGAGGTCCTTGGATTGGACGACACGATTTAAAATAATTACCGGTGTGGCAAGAGGACTTCTCTACCTGCACGAAGAGGCCCCGGAAAGAATTATTCACAGAGACATTAAAGCTAGTAACATATTGCTAGACGAGAAATTAAATCCGAAAATTTCAGACTTTGGTTTGGCAAGACTGTTTCCTGGAGAGGATACTCATGTGCAGACATTTAGGATTTCCGGTACACATGGTTACATGGCTCCTGAATATGCAATGCGTGGATATCTTTCTGTAAAGACTGATGTTTTCAGTTATGGAGTGTTGGTGTTGGAAATAGTTAGCGGGAGGAAAAACCACGATGTGAAGCTTGGTTCCGAAAAGGCAGATCTCCTAAGCTATGCATGGAAGCTTTATCAAGGAGGGAAGATTATGGATTTAATAGACCAAACCATTGGTAAATACAATGGCGACGAGGCTGCAATGTGCATTCAGTTAGGTTTACTATGCTGTCAAGCAAGTATAGTAGAAAGACCAGACATGAATTCAGTTCATCTTATGTTATCAAGTGATTCATTCACTTTGCCAAGACCAAGTAAACCAGGAATTCAGGGTCGTGTCGGAAAATGGAATACAACCAGTACTTCTGCTTTGACCAATACTAATGCTAGTAGTGCTACAAAGGCTTCAGGTGGTAGTAGTTTTGTAGAGGATTATTCTAGAAATTCTATTTCTACTTCTTCTTTTGATGAAGGTAGATAG 1254 0.4019 MDTTKSTTSCFFLSFCFLHEYRVDFSVDRTMFFSKFFSCLQKCRKKHGTVSDDNDDDNDTIDAVDSSSNLLFELHTLQLATNFFSELNQLGRGGFGPVFKGLMPNGEEVAIKKLSMESRQGIREFMNEVRLLLRIQHKNLVTLLGCCAEGPEKMLVYEYLPNKSLDHFLFDKKRSLDWTTRFKIITGVARGLLYLHEEAPERIIHRDIKASNILLDEKLNPKISDFGLARLFPGEDTHVQTFRISGTHGYMAPEYAMRGYLSVKTDVFSYGVLVLEIVSGRKNHDVKLGSEKADLLSYAWKLYQGGKIMDLIDQTIGKYNGDEAAMCIQLGLLCCQASIVERPDMNSVHLMLSSDSFTLPRPSKPGIQGRVGKWNTTSTSALTNTNASSATKASGGSSFVEDYSRNSISTSSFDEGR* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0252 417 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 32 415 - -
Tpr5g0252 417 Pfam Protein tyrosine and serine/threonine kinase 88 299 IPR001245 GO:0004672|GO:0006468
Tpr5g0252 417 ProSiteProfiles Protein kinase domain profile. 84 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0252 417 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 32 415 - -
Tpr5g0252 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Tpr5g0252 417 CDD STKc_IRAK 90 352 - -
Tpr5g0252 417 SMART serkin_6 84 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0252 417 Gene3D Transferase(Phosphotransferase) domain 1 160 358 - -
Tpr5g0252 417 SUPERFAMILY Protein kinase-like (PK-like) 72 365 IPR011009 -
Tpr5g0252 417 Gene3D Phosphorylase Kinase; domain 1 46 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0252 Tpr-Chr5 3647421 3651047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0252 31 384 Receptor kinase-like Gene Family AT4G23150 47.632 3.25e-111 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr5g0252 PK_Tyr_Ser-Thr 3.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0252 - - aprc:113868075 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0252 5 3647421 3651047 Tpr5g0252 5 3647421 3651047 ECH