Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0239 ATGAATACACCATCTAACAACCATACTACTGAGCCTAGGGATGTCGCTAGTTCGAGTTCTAATTCCACCGGAATTAACCTACCTCCGAGGAATTCAAGTTCTAATTCCACCAGAATTAACCTACCGCCGAGGAAGCCAGACTCGAAGTTTCAACGTGTTTCACATACCCCACTTATGACAGAACCGCCCGGCACATTAACAAATCAAGTAGGTAATAAGTTTTACGAGGCATTTCAACAAAAACATGGAAGTTATGCTGATCTTCCTGCTGCCAAAATTACGGAACTAATGAAATCGTCTAGTTTGGATCATTTAATGATGCAGAATGCTCCTACTCAATCACTTTTGAGTGTTGTGAATGGTATCCTAGAAGAAAGTGTTGAAAGAAGAAGTGGCGAAATACCCCTTCGCGTGGCTTGCTTGTTGAGGAAAGTTGTCCAAGAGATTGAGCGGCGTATATCAACACAGCAAGAACATTTAAGAACGCAAAACAATCTTTTTAAGACTCGTGAAGAAAAATATAAATCAAGAATATCAGTACTCGAGGCTCTTGCATCAGGAATAAAGGAAGAGAGTAAGGTAACAAAGAATGAGAATATTATAAAGGAAGAAAAAAATGCACATGACTCGAGACCGACTGAGAAGATTGTCAAGGAAGAAAAAAATGTAAATGACTCGAAACTGACTGAGAAGATTGTCAAAGGCGAAAAGAAAACAGATGAGTCGATGCAGACCGATAACATTAAAGACGAGGAAGAAAAGAAAGAAATTGATAAAGAAGTTATTAGATTGATTAAAGAAGTGGAGGACAAAAATTTAGAAAAAATGGAAATTGATAAAGAAGTTAGTAGATTGATCAAAGAGGTCGAGGACAAAAATATGAAAATTTCAACATTGGAGCTAGACATAGAAACAATCCAAAAAAGATATGAAGTTGAATGCTCAAAGATGGAATCAGAAGCTAAGGATGAAATGGATAAAGAAGTTATTCGATTGAATAAAGAGATCGAGGTCAAAAATATGAAAATTTCAACATTGGAGCAAAACATAGAAACAATCCAAAAAAGATATGAAGTTGAATGCTCAAAGATGGAATCAGAAACTAAGGATGAAATGGATAAAGAAGTTATTCGATTGAGTAAAGAGATCGAGGACAAAAATATGGAAATTTCAACATTGAAGCGAGACATAGAAACAATCAAACAAAGATATGAAGCACAATGCTCAAAGATGGATTCGGAAGCTAAGAATGAAATGGATAAAGAAGTTATTAGATTGAATAGAGAGATGGAGAACAAAAATATGGAAATTTCAACATTGAAGCAAGACATAGAAACGATCAAAAAACGATATGAAGAGCAATGCTCAAAGTTGGAATCAGAAGCTAAGGATTCTAAAGGAGAATTGATTAAAGAGGTGGGAGAAAAAAATATGGAAATTTCAACATTGAAACAAGACATAGAAACGATCAAAAAACGATATGAAGTCGAATGCTCAAAGATGGAATCAGAAGCTAAGGATTCTAAAGGAGAATTGATTAAAGAGATGGAGGACAAAAATATGGAAATTTCAACATTGAAGCAAAACATAGAAACGATCAAAAAACGATATGAAGAACAATGCTCAACGTTGGAATCAGAAGCTAAGGATTCTAAAGGAGAATTGATTAAAGTGGTGGAAGATAAAAATATGGAAATTTCAACATTGAAGCAAGACATAGAAACAATAAAAAAAAGTTATGAAATACAATGTTCAAAGTTGGAATCAGAAGCTAATGATTCTAAAGGAGAATTGATTAAAAAGATGGAAGATAAAAATATGGAAATTTCAACATTGAAGCAAGAGTTAGAAACACTTAAAAAAAGTTATGAAGTACAATGCTCAAAGTTGGAATCAGAAGTTAAGGATGCTAAAGGAGAATTGAAACAAAAATCACAAGAATATGAGGATCTATTGGAAAAGTTAAGAAATAAACTTCAAGAGAGTGAAACTTTGACTAAGTTAAAACTTGAGAAGTGGAACATGAAACAAACCCTAATGCAGAAAGCTATGAATTTTCAGTTTGGTTCTATACAGCAATTGAAATTGTCTTGGGAATCCATTAAGCAAGATGTTATGAAAGAGCAAACGATGTACTCAGAGGAATGCAAAAGATTTGGTGTAAATATTAAACCACTAGTGCATGCAGCTGAGAATTATCATACAATTCTTGAAGAAAATAGAAAATTATTTAATGAACTTCAAGAATTAAAAGGAAATATTAGAGTATATTGTAGAATTAGACCATTTATGCCTGGCCAAAAAGATAAACAATCTATTGTTGAACGCATTGGTGAATCAGATATGGTTGTAGCAAATCCAGACAAAAAAGGAAAAGAAGCACTCAAAACATTTAAGTTTAATAAGATCTTTGGCCCTGCCTCAACTCAAGCTGAAGTATATGATGACATACAAGCCTTTATAAGATCAGTACTTGATGGTTATAATGTTTGTATATTTGCTTATGGTCAAACAGGTTCAGGAAAAACTTATACAATGAGTGGTCCAAACAATGCAACCAATGAGGATGTTGGTGTTAACTATAGAGCTCTAAATGATCTCTTCAACATATCAGCAAGCAGACAAAGCTCCATAGTTTATGAAATTGGAGTTCAGATTATTGAGATATATAATGAACAAGTTCGAGATTTGTTATCAACTGATGCATCTGTCAAAAAACTTGGGATATTGAATCACTCTCAACCAAATGGTTTAGCAGTACCTGATGCTACTATGCTCCCTTGTAAATCAACTGCTGATGTCATAAAGCTAATGGACATTGGTTTGAAAAATAGAGCAAAGAGTTCAACTGCTATGAATGAACGAAGTAGTCGTTCTCACAGTGTGGTTTCGATTCATGTTCGTGGCGCAGATAAGAAATCTGGTTCGACTCTCCAAGGTAATCTTCATTTGGTAGATTTGGCGGGAAGTGAAAGGATAGATCGCTCTGAAGTAACCGGTGATAGATTAAAGGAAGCACAACATATTAACAAATCATTGTCTGCTCTTGGGGATGTCATTTTTGCCCTTGCTCAAAAGAGTTCTCATGTACCATATAGAAACAGCAAGCTCACACAAATTTTGCAAACCGCTCTCGGTGGTCATGCAAAGACACTCATGTTAGTTCAAATTAATTCAGAGTTGAAGTCTTATTCCGAATCTTTGAGTACTTTAAAATTTGCTGAGAGGGTTTCTGGAGTTGAGTTAGGAGTTGCAAAAAGTTCAAAAGATGGAAGAGATGTTAGAGAATTAATGGAACAGGTGGCTTCTCTCAAAGATACGATTTCGACAAAAGATGAAGAAATCGAGCGACTACAATTACTTAAGGATCTAAAATCGAGTGGTGAATAG 3390 0.3463 MNTPSNNHTTEPRDVASSSSNSTGINLPPRNSSSNSTRINLPPRKPDSKFQRVSHTPLMTEPPGTLTNQVGNKFYEAFQQKHGSYADLPAAKITELMKSSSLDHLMMQNAPTQSLLSVVNGILEESVERRSGEIPLRVACLLRKVVQEIERRISTQQEHLRTQNNLFKTREEKYKSRISVLEALASGIKEESKVTKNENIIKEEKNAHDSRPTEKIVKEEKNVNDSKLTEKIVKGEKKTDESMQTDNIKDEEEKKEIDKEVIRLIKEVEDKNLEKMEIDKEVSRLIKEVEDKNMKISTLELDIETIQKRYEVECSKMESEAKDEMDKEVIRLNKEIEVKNMKISTLEQNIETIQKRYEVECSKMESETKDEMDKEVIRLSKEIEDKNMEISTLKRDIETIKQRYEAQCSKMDSEAKNEMDKEVIRLNREMENKNMEISTLKQDIETIKKRYEEQCSKLESEAKDSKGELIKEVGEKNMEISTLKQDIETIKKRYEVECSKMESEAKDSKGELIKEMEDKNMEISTLKQNIETIKKRYEEQCSTLESEAKDSKGELIKVVEDKNMEISTLKQDIETIKKSYEIQCSKLESEANDSKGELIKKMEDKNMEISTLKQELETLKKSYEVQCSKLESEVKDAKGELKQKSQEYEDLLEKLRNKLQESETLTKLKLEKWNMKQTLMQKAMNFQFGSIQQLKLSWESIKQDVMKEQTMYSEECKRFGVNIKPLVHAAENYHTILEENRKLFNELQELKGNIRVYCRIRPFMPGQKDKQSIVERIGESDMVVANPDKKGKEALKTFKFNKIFGPASTQAEVYDDIQAFIRSVLDGYNVCIFAYGQTGSGKTYTMSGPNNATNEDVGVNYRALNDLFNISASRQSSIVYEIGVQIIEIYNEQVRDLLSTDASVKKLGILNHSQPNGLAVPDATMLPCKSTADVIKLMDIGLKNRAKSSTAMNERSSRSHSVVSIHVRGADKKSGSTLQGNLHLVDLAGSERIDRSEVTGDRLKEAQHINKSLSALGDVIFALAQKSSHVPYRNSKLTQILQTALGGHAKTLMLVQINSELKSYSESLSTLKFAERVSGVELGVAKSSKDGRDVRELMEQVASLKDTISTKDEEIERLQLLKDLKSSGE* 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0239 1129 Coils Coil 1094 1121 - -
Tpr5g0239 1129 Gene3D - 371 412 - -
Tpr5g0239 1129 Gene3D - 506 545 - -
Tpr5g0239 1129 Gene3D - 549 588 - -
Tpr5g0239 1129 Gene3D - 275 318 - -
Tpr5g0239 1129 Gene3D - 596 631 - -
Tpr5g0239 1129 Gene3D - 417 459 - -
Tpr5g0239 1129 Gene3D - 463 502 - -
Tpr5g0239 1129 Gene3D - 324 365 - -
Tpr5g0239 1129 MobiDBLite consensus disorder prediction 1 62 - -
Tpr5g0239 1129 Coils Coil 733 753 - -
Tpr5g0239 1129 MobiDBLite consensus disorder prediction 1 42 - -
Tpr5g0239 1129 PRINTS Kinesin heavy chain signature 827 848 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr5g0239 1129 PRINTS Kinesin heavy chain signature 950 967 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr5g0239 1129 PRINTS Kinesin heavy chain signature 981 999 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr5g0239 1129 PRINTS Kinesin heavy chain signature 1030 1051 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr5g0239 1129 Gene3D Kinesin motor domain 695 1082 IPR036961 -
Tpr5g0239 1129 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 753 1118 IPR027417 -
Tpr5g0239 1129 Coils Coil 369 468 - -
Tpr5g0239 1129 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 607 1122 - -
Tpr5g0239 1129 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 15 417 - -
Tpr5g0239 1129 Coils Coil 254 309 - -
Tpr5g0239 1129 Coils Coil 322 356 - -
Tpr5g0239 1129 SMART kinesin_4 751 1088 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr5g0239 1129 PANTHER KINESIN-LIKE PROTEIN KLP-3 15 417 - -
Tpr5g0239 1129 PANTHER KINESIN-LIKE PROTEIN KLP-3 607 1122 - -
Tpr5g0239 1129 Coils Coil 484 554 - -
Tpr5g0239 1129 Pfam Kinesin motor domain 759 1078 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr5g0239 1129 Coils Coil 559 668 - -
Tpr5g0239 1129 ProSiteProfiles Kinesin motor domain profile. 753 1080 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0239 Tpr-Chr5 3457578 3467314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0239 432 1080 Calmodulin-binding Proteins AT5G65930 30.382 8.71e-66 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0239 K10406 - csv:101213894 1064.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0239 5 3457578 3467314 Tpr5g0239 5 3457578 3467314 ECH
Tpr3g0362 3 3887961 3894187 Tpr5g0239 5 3457578 3467314 PCT