Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0233 ATGGCAAAGGCAAGGGATAGGACTGAGGACTTCAAAGATGCCGTGCGCCAAAGTGCTCGCTCTTTGGGTTATGATGAGGCTAAATTGGCATCCATTTTGGCATCTTTTATTATTCATAAACCCCCACAAAGGTCCCCATTCACCAAAGCTGCATATAAGACGCTCGAGAGTATTGGAGAATTGGACCATTTTTTGTTAAAGCATAGAAAGGACTATACAGATCTGCACCGAACAACGGAACATGAGAGAGATAGCATTGAGAATGAAGTTAGTGCTTTTATTAAAACTTGCCAGGAACAAATTGACGTTCTTAAGAATAGTATAAACAATGAAGAGGAAAACTCAAAAGGTTGGCTTGGCATCACAACAGCAAAGGCTAACGCTGACACCATTGCCCACAAACATGGGGTGGTTCTAATTTTAAGCGAGAGGCTTCATTCAGTTACGTCACAGTTTGATCAACTCAGAGCTATACGCTTCCAGGATGCTATTAACAGGGCAATACCACGTAGAAAACTTAATCGTGTAACCAAGAAAGATTCTACCGAAACCTCTAATTCAGGTGATGTGGAGCTCAGAGAACCAGATGAGTTGCGCAGTGAGCCTCTAAGAGTCCAACAGCAACTCTTGGATGATGAAACACGTGCCCTTCAGGTGGAATTGTCTAATCTTCTAGACACAGTTCAAGAAACTGAAACTAAAATGGTAGAAATGTCTGCATTAAATCACTTGATGGCTACACATGTTTTGCAACAAGCTCAACAAATTGAACATTTGTATGACCAGGCTGTTGAAGCTACCAAGAATGTTGAGCTTGGTAACAAAGAACTCTCACAAGCCATTCAACGGAATAGCAGCAGCAGAACATTTCTTTTACTATTTCTGTTTGTGCTCACTTTTTCCATCATCTTTCTTGATTGGTATAGTTAA 930 0.4086 MAKARDRTEDFKDAVRQSARSLGYDEAKLASILASFIIHKPPQRSPFTKAAYKTLESIGELDHFLLKHRKDYTDLHRTTEHERDSIENEVSAFIKTCQEQIDVLKNSINNEEENSKGWLGITTAKANADTIAHKHGVVLILSERLHSVTSQFDQLRAIRFQDAINRAIPRRKLNRVTKKDSTETSNSGDVELREPDELRSEPLRVQQQLLDDETRALQVELSNLLDTVQETETKMVEMSALNHLMATHVLQQAQQIEHLYDQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIIFLDWYS* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0233 309 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
Tpr5g0233 309 Gene3D - 211 306 - -
Tpr5g0233 309 PANTHER SYNTAXIN-18 5 309 - -
Tpr5g0233 309 Coils Coil 94 114 - -
Tpr5g0233 309 PANTHER SYNTAXIN-18 5 309 - -
Tpr5g0233 309 MobiDBLite consensus disorder prediction 175 196 - -
Tpr5g0233 309 SUPERFAMILY t-snare proteins 56 273 IPR010989 GO:0016020|GO:0016192
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0233 65 309 SNARE and Associated Proteins AT1G51740 76.423 1.18e-118 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0233 K08492 - gmx:100778011 530.791