Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0214 ATGTTACCTCAAACACTAGTTAACCCTGAATTTCTCTTTCTTACAATATTCATACTCATTCTATTGGTTACTATATTTCTTCACTCAAAATTGCATAAAAAAAATGGTAGGAAAAATCCACCAGGTCCAAAACCATTGCCAATTATTGGTCACCTTCACATGCTAGGTAAACTTCCACATCGTACCCTTCAATCCCTTTCACAAAAATATGGACCCATAATGTCATTGAAATTAGGACAAGTCCAAACCATTGTAGTTTCATCATCTCAAATTGCTGAACTATTCCTCAAGACCCATGATAGTATTTTCTCTAGTAGACCCAAAACTTTTGCTTCAAGTTATTTTTCATATGGTGGAAAGGGCATAGTTTTCACTGAATATGGGGACTATTGGCGAAATATGAGGAAATTGTGTAACATTCAATTGTTGCATACTTCAAAAGTTGAAATGTTTGCTCCTTTGAGGAAGGTAGAAGTTGGATTGTTGATTAAGTCATTAAGAAAATCAGCAACATTACATGAGGTTGTTCATGTTAGCAAGGTTGTAGCTGAGCTTATTGAGAATATCAATTACAAAATGATATTGGGTCGAAGCAAAGATGATAAGTTCGACTTAAAAGAGCTTGTTCACGAGGAATTGACATTGATTGGAATGTTTGATCTGGCTGACTATCTACCTTGGTTACGTCCGTTTGATCTTCAGGGAATAGAAAGACGTTGTAAGAAAGCATGGAAGCAACTTGATGAATTTTTGGAGTACATAATAAAAGAGCACGAGAATCCATCAATTGAAGAACAAAAAGGTCATAACAACAAAGATTTTGTAGACATATTGTTATCACTCATGAACCAACCAATTGATTTCAAAGACAAAAAATATGACATTGATAGAACCAACATCAAGGCTCTTATAATGGATATGATTTCAGCAGCAATAGACACAACAGCTGTTGCAACTAATTGGGCTCTTTCACTACTTCTAAAGCATCCTAATGCAATGAAGAAACTTCAACATGAGCTAGAAAATGTGGTTGGAATGAATAGACAAGTGGAAGAGAGTGACTTGGCAAATTTGCCTTACTTGTCTATGGTTATGAAAGAGACCTTAAGGTTGTTTCCTGTTGGACCTTTGGGAGCACCTCATGTGTGTCTTCAAGATGTTGTTGTAGATGGTTATTACATAAAGAAAAATACAACAGTTTTAATAAATTTATGGACAATAGGGAGAGATACTAAGGTTTGGTCAGATAATGCTGAGATGTTTTGTCCAGAGAGATTTAAAGATAGTAATGTAGACCTTCGCGGACACAATTTTCAACTCATACCATTTAGTTCAGGTCGAAGAAGTTGTCCCGGAATGGAAATGGGATTAACTAGTTCGAAATTGGTTGTGGCTCAGCTAATGCATTGCTTCGATTGGGAGCTTCCATATGGTATGTCTCCAGATAATTTAGACATGTCTGAAAAATTTGAGCTCACAATTCCGAAAAGTCAACCCTTATTAGCTGTGCCAACCTTTCGTCTGGTTGCTTAG 1533 0.3614 MLPQTLVNPEFLFLTIFILILLVTIFLHSKLHKKNGRKNPPGPKPLPIIGHLHMLGKLPHRTLQSLSQKYGPIMSLKLGQVQTIVVSSSQIAELFLKTHDSIFSSRPKTFASSYFSYGGKGIVFTEYGDYWRNMRKLCNIQLLHTSKVEMFAPLRKVEVGLLIKSLRKSATLHEVVHVSKVVAELIENINYKMILGRSKDDKFDLKELVHEELTLIGMFDLADYLPWLRPFDLQGIERRCKKAWKQLDEFLEYIIKEHENPSIEEQKGHNNKDFVDILLSLMNQPIDFKDKKYDIDRTNIKALIMDMISAAIDTTAVATNWALSLLLKHPNAMKKLQHELENVVGMNRQVEESDLANLPYLSMVMKETLRLFPVGPLGAPHVCLQDVVVDGYYIKKNTTVLINLWTIGRDTKVWSDNAEMFCPERFKDSNVDLRGHNFQLIPFSSGRRSCPGMEMGLTSSKLVVAQLMHCFDWELPYGMSPDNLDMSEKFELTIPKSQPLLAVPTFRLVA* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0214 510 Gene3D Cytochrome P450 25 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0214 510 PANTHER CYTOCHROME P450 93A3-LIKE 17 509 - -
Tpr5g0214 510 Coils Coil 333 353 - -
Tpr5g0214 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Tpr5g0214 510 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0214 510 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0214 510 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0214 510 Pfam Cytochrome P450 40 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0214 510 PANTHER CYTOCHROME P450 FAMILY PROTEIN 17 509 - -
Tpr5g0214 510 SUPERFAMILY Cytochrome P450 40 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0214 510 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0214 510 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0214 510 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0214 510 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0214 510 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0214 510 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0214 510 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0214 Tpr-Chr5 3118996 3122091 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0214 12 509 Cytochrome P450 AT5G07990 39.804 9.75e-125 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0214 - - gmx:100798918 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0214 5 3118996 3122091 Tpr3g0368 3 3942186 3945259 PCT