Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0213 ATGTTACCTCTAACATTAGCTATTCCTTCCATACTCTTTCTAATATTCATTTTGATTTTATTTCATCCAAAACATCATCAACAACATAATAAAAATCATCCACCTGGTCCTAAACCTTTTCCAATTATTGGCAACCTTCACATCCTTGGAAATCTCCCACATCGTACCCTTCAATCCCTTGCCCAAAAATATGGACCAATCATGTTATTAAAACTAGGAAAAATTCCAACAATTGTAGTTTCATCTCCCAAATCAGCTGAACAATTTCTCAAAACACATGACACTATTTTTTGTAGTAGACCAAACCTTCAACTCTCCGAACACATGTGGTACGGTGGAAAAGGATTAGGCTTAGCTCCATATGGGCCGTATTGGCGCAATATGAGGAAACTATGTACTTTGCATCTTTTGAGTAGTTCGAAAGTTGAGATGTTCGCGCCTCTGAGAAGCGAGGAATTGAAGATTATGTTAAAGTCCGTTGAGAAAGCTGCGACTTTAGGTGAAGTTGTGAATCTAAGTGAGATGATTGGTGAGGTTGTAGCGAATATTACTTACAAGATGGTTTTGGGATGTAATAAGGATAGTGATTTGGATTTGAAGGGACTTATTCGTGAAACAATGAACTTGGCTGGAAGTTTTAATTTGACAGATTTTTTGCCTTGGCTAAGCATCTTTGATATTCAGGGACTAACAAGTCAAATGAAGAAAATAAACAAGGAATTTGATCAAATTGTGGAGAAGATAATCAAAGATCATGAGCATGACATGAAAAAAGATCCTCACCATAAGGACTTTATTGATGTGTTACTATCATTAATGGATCAACCAATGGATCCTAATGATGAAGAACAAAAACATGTCATTGATAGAACTAATATCAAAGCTATTATATTAGACATGATTGCTGCATCATTAGACTCATCTTCAACAACAATTGAATGGGCCATGTCCGAACTCTTAAGGAATCCAAATGTGATGAAGAACCTTCAAAATGAGCTAGAAAATGTGGTAGGTTTGAATAATAAGGTAAGAGAAAATGATTTTGAAAAATTACCTTATCTTAATATGGTATTGAAGGAGACATTTAGATTACATCCATCTGGACCATTGCTAACACCTCGTGAGTGTCTAAAAGATGTTACAATTGATGGATACTATATAAAGAAAAATTCTAGGATAATAATAAATGCTTGGGCATTAGGAAGAGATCCTGAATTTTGGACGAATAATTGTGACATGTTTTATCCTGAGAGATTTGTGAATAGTAATGTAGATTTTCGAGGACAAGATTTTCAACTTATTCCATTTGGATCGGGTCGTAGAGGGTGTCCTGGAATTCAATTAGGCCTAAATACTGTTAGTCTTGTTGTGGCCCAATTGGTACATTGCTTTGATTGGGAACTTCCATTTGGTATGTCTTCTAATGACTTGGATATGACCGAGAAATTTGGACTCTCAATGCCAAGATGTAATCCCTTGCTAGCCCATCCAACAACTCGAATTCAAAATTGTGATATATAG 1521 0.3557 MLPLTLAIPSILFLIFILILFHPKHHQQHNKNHPPGPKPFPIIGNLHILGNLPHRTLQSLAQKYGPIMLLKLGKIPTIVVSSPKSAEQFLKTHDTIFCSRPNLQLSEHMWYGGKGLGLAPYGPYWRNMRKLCTLHLLSSSKVEMFAPLRSEELKIMLKSVEKAATLGEVVNLSEMIGEVVANITYKMVLGCNKDSDLDLKGLIRETMNLAGSFNLTDFLPWLSIFDIQGLTSQMKKINKEFDQIVEKIIKDHEHDMKKDPHHKDFIDVLLSLMDQPMDPNDEEQKHVIDRTNIKAIILDMIAASLDSSSTTIEWAMSELLRNPNVMKNLQNELENVVGLNNKVRENDFEKLPYLNMVLKETFRLHPSGPLLTPRECLKDVTIDGYYIKKNSRIIINAWALGRDPEFWTNNCDMFYPERFVNSNVDFRGQDFQLIPFGSGRRGCPGIQLGLNTVSLVVAQLVHCFDWELPFGMSSNDLDMTEKFGLSMPRCNPLLAHPTTRIQNCDI* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0213 506 PANTHER CYTOCHROME P450 93A3-LIKE 3 502 - -
Tpr5g0213 506 SUPERFAMILY Cytochrome P450 34 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0213 506 Gene3D Cytochrome P450 23 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0213 506 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0213 506 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0213 506 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0213 506 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0213 506 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0213 506 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0213 506 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0213 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Tpr5g0213 506 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0213 506 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0213 506 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0213 506 Coils Coil 227 247 - -
Tpr5g0213 506 Pfam Cytochrome P450 34 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g0213 506 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 502 - -
Tpr5g0213 506 Coils Coil 326 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0213 Tpr-Chr5 3114662 3117883 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0213 4 501 Cytochrome P450 AT5G07990 40.551 3.38e-136 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0213 - - gmx:100782715 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0213 5 3114662 3117883 Tpr5g0213 5 3114662 3117883 ECH