Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0206 ATGAATATTTTCTATTGTTTTGGAAAAAAGTTGCAACACCTTTGTAACACATCATGCCAAAAACTTACTTATCTTATCAAATCAATTTTTTTCTTAGCAGCATGTTTTTGTCGTTTCATTCTCCTAAGAGCAAATCCATTATGGATTCAAATTGTATATTTCATTTCTATTTCCATTTTGGGTTTTGGATTTCTCAAAGTTATAAAGCCTTTAAATCAAACAAAACCTAAAAACTTAGATTTGTTCTTCACATCCATTTCAGCCACAACAGTTTCAAGCATGTCCACAGTTGAAATGGAAACTTTTTCTAATCCTCAACTAATCATCATTACCATCTTAATGTTCATAGGTAGTGAAATTTTCACATCAATGGTAGGACTTCATTTCATTAGATCAAGACTCAAAACTGATCTTGATAAAATCGCTTCTTCTCACGCACGTCTTGCTTCTCTAAACCCTTTCATTGTTGATCAAATTCATCTTGAACTTGAAATGGTCACAAACGAGGTACACAATAAATCGCACGAATCTTTACATAGCATATCACACGAATCTTCACATAATAAATCACATGAGTCTTTGCACAATAAATCACACCAATCTTTGCACAATATTTCACATGAATCATTGAGTACAACAAATGAAAATTTAAGGTACTTGTCTATGAAATATTTGGGTTATGTAGTTCTTGGTTACATTGTAATTCTCCATATTACAGGTGTATTTGGGGTTACTCTATACCTTGAAATGATTCCTAGTGCCAAACAAGTATTAAAAAACAAGGGTCTAAACATAACCACATTCTCTATTTTCACAATAGTATCAACTTTTGCAAATTGTGGTTTTGTTCCAACAAATGAAAACATGGTTGTTTTTAGACAAAATTCAGGTCTTTTACTTATGCTTATCCCACAAGTACTTCTTGGGAACACATTGTACCCTGCATGTTTAAGATTTTGTATATGGGTATTGGGAAAATTTTACAAGAAAAAAGAGTGTAATTATCTTTTGAAACATACAGAAGAGGTTGGTTACAAACATTTGTTAAAGGGGAAGCATTCTGTTTTTCTTGTGGCTACTGTTTTTGGGTTGATTGTGGTACAAGTTACATTGTTTTGTGTAATGGATTGGGATTCAGAAGGTTTGAAGGGTTTGAATAATTATGAGAAATTGATTGGTGTGTTGTTTCAAAGTGTGAATTCAAGACATACAGGAGAAAGTATTGTGGATATCTCAATTCTATCACAAGCCATGTTGGTATTGTTTGTGCTCATGATGTACCTTCCTCCTTACACATCATTCCTCCCCATAAAAGATGATATGAAAAATTCAAAAAGCAATAAGAGGATGAAAAAGAGAAGAGGAAAAGTGACAGAGAATTTGATATTATCTCAACTCTCCTATTTAGTCATATTCATAATACTAGTGTGCATAACCGAGAGGAAAAAATTGAAGGAAGATCCTCTCAATTTCAATGTTCTCAATATTGTTGTTGAAGTTATCAGTGCGTATGGGAGCGTAGGATTTAGTACAGGATACAGTTGTGAAAGACAATTGCATCCAGAGGCAAATTGTGAAAACAAGTGGTTTGGATTTGTTGGAAAATGGAGTGATGAGGGTAAAATTATTCTTATACTTGTTATGTTGTATGGAAGGCTAAAAAAATTCAATATGGATGGAGGGAAGCCATGGAAACTTCTCTGA 1704 0.3298 MNIFYCFGKKLQHLCNTSCQKLTYLIKSIFFLAACFCRFILLRANPLWIQIVYFISISILGFGFLKVIKPLNQTKPKNLDLFFTSISATTVSSMSTVEMETFSNPQLIIITILMFIGSEIFTSMVGLHFIRSRLKTDLDKIASSHARLASLNPFIVDQIHLELEMVTNEVHNKSHESLHSISHESSHNKSHESLHNKSHQSLHNISHESLSTTNENLRYLSMKYLGYVVLGYIVILHITGVFGVTLYLEMIPSAKQVLKNKGLNITTFSIFTIVSTFANCGFVPTNENMVVFRQNSGLLLMLIPQVLLGNTLYPACLRFCIWVLGKFYKKKECNYLLKHTEEVGYKHLLKGKHSVFLVATVFGLIVVQVTLFCVMDWDSEGLKGLNNYEKLIGVLFQSVNSRHTGESIVDISILSQAMLVLFVLMMYLPPYTSFLPIKDDMKNSKSNKRMKKRRGKVTENLILSQLSYLVIFIILVCITERKKLKEDPLNFNVLNIVVEVISAYGSVGFSTGYSCERQLHPEANCENKWFGFVGKWSDEGKIILILVMLYGRLKKFNMDGGKPWKLL* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0206 567 PANTHER SODIUM TRANSPORTER HKT1 22 566 - -
Tpr5g0206 567 MobiDBLite consensus disorder prediction 174 198 - -
Tpr5g0206 567 Pfam Cation transport protein 214 521 IPR003445 GO:0006812|GO:0008324|GO:0055085
Tpr5g0206 567 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 22 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0206 Tpr-Chr5 3033387 3037299 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0206 66 566 Inorganic Solute Cotransporters AT4G10310 45.833 2.32e-147 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0206 K24976 - nnu:104601582 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0206 5 3033387 3037299 Tpr5g0206 5 3033387 3037299 ECH