Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0192 ATGTTGAAGAGAGAACAATGTGACCACACTAAACATGATTCCAGTTTCTCTCATTGGAAGATTCTTGTTGGTCCTTCTGATTGGGAAGATTATTCCAATGGAAAGGAAGGATCTACAAGATATAGGATTCACAACCTGCCACAAAATTCTGGTCCCGGAGTTTATGAGCTTGGAGTAGCTATAACGACTAGCGGTTTGGGGCGTGAAATTTTCAAGCTTACCAGCGACCCTCATCGCGTAGTTGTGGTTTATCTAGGAAAAGCTGACAATGTGAGAACAAGACTGCAATGTTATGGTAGAAATGGAGCTCATTTGGGTAAAGGTTGTTATTCATTTGAATCGTCTGATCATGATCAAATGGGTCGCTCATTGTTTCACGAGATATTTTTTCAAGGCTTCCCAATTGTGTATAGATGGGCTCCTATGCAAACCAAGGGAGATGCCTTGCAAACAGAATCTCAACTGCTAACTACATTTGATTATGCATGGAATACAATTAATAATGGTAAGCGTCGGCCCGATGATATTCTTGAAATGCTCAACAAAATTACTTCAAGCGCAAGAACAAGAACAATATCAGATGTGGCCAAATCACTTATACCCTTCACTCAAAAGAAAGTAGGGATACCAATTAAATCAAGAAAGTTGCCTATGACAGATAACAAATCAGACGAATCAGACAATGGTAACTACAATTTCCTATCTCGCGTGTTTAAATTCAACCGTTTGCGTCCTAAGATAGTTCAGGATACAACTGATTGCGCCTTTGAGAATCATGGTAAAGTTTGTGGAGTTATTTTGGATGATGGTTCTATTTGTACGAAGTTGCCGGTCGAAAAAAGAGTTAGGTGTCTTGAACACAAAGGAATGAGAATAAATGTGATCACTGCAAAAGCAATAAGAAGATCCAAGTCAGAATCAGAAACTGTTATTGAGAGTCATGTGGATGAAAGTATCTCTAAAACCATTATATGTGGAGTTATTATGGAAAATGGATCCACGTGTAGAAGAGAACCAGTTAAAGGAAGAAAAAGATGTCATGAACATAAAGGAAAGAGAATTCGTGCATCTGTTCCTATAAATCAGAAATAA 1092 0.3819 MLKREQCDHTKHDSSFSHWKILVGPSDWEDYSNGKEGSTRYRIHNLPQNSGPGVYELGVAITTSGLGREIFKLTSDPHRVVVVYLGKADNVRTRLQCYGRNGAHLGKGCYSFESSDHDQMGRSLFHEIFFQGFPIVYRWAPMQTKGDALQTESQLLTTFDYAWNTINNGKRRPDDILEMLNKITSSARTRTISDVAKSLIPFTQKKVGIPIKSRKLPMTDNKSDESDNGNYNFLSRVFKFNRLRPKIVQDTTDCAFENHGKVCGVILDDGSICTKLPVEKRVRCLEHKGMRINVITAKAIRRSKSESETVIESHVDESISKTIICGVIMENGSTCRREPVKGRKRCHEHKGKRIRASVPINQK* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0192 363 Pfam GIY-YIG domain-containing protein 16 177 - -
Tpr5g0192 363 Coils Coil 362 363 - -
Tpr5g0192 363 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 1 357 IPR038909 GO:0003677|GO:0006355
Tpr5g0192 363 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 1 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0192 Tpr-Chr5 2877287 2879788 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0192 276 362 HRT Transcription Factor Family AT5G56780 38.636 1.72e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Tpr5g0192 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0192 - - lang:109350609 431.024