Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0186 ATGGGTCGGCGTAGAAACAAGAATCAAACCAACCAAGAAGAAAACAAGAGTAACAATAACAACAACAACAACAACAACATGGACAACAACAACCACCTTCGATTCCAAGATGCTGACGAGGTAATTGAGGATGCTGCTGAAACATCCAACCTCGACCAATCAATGGGTGGTTGTGAACTTGATGATTCCAATGACAAAACCAGCGCCGATTACTACTTTGATTCTTACTCTCACTTTGGAATTCATGAAGAAATGTTGAAGGACACTGTAAGAACCAAAACATATCAAAATGTTATTTATCAGAATAAGTTTTTATTCAAGAATAAAGTAGTTCTTGATGTCGGTGCCGGGACTGGGATTTTATCACTGTTCTGTGCCAAAGCAGGGGCAGCACATGTCTATGCAGTCGAGTGCTCTCAAATGGCTGATAGGGCAAAGGAAATAGTTGAAGCTAATGGTTTCTCTGAAGTTATAACAGTTTTGAAAGGGAAGATTGAAGAACTTGAACTTCCAGTTCCTAAGGTTGATATAATCATTTCCGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGTTAAATTCTGTGCTCTATGCACGTGACAAATGGCTTGTGGATGATGGAGTTATTTTACCGGATATTGCATCGCTCCACATTACTGCCATTGAAGATAAAGATTACAAAGAAGATAAAATTGAGTTTTGGAATAATGTCTATGGATTTGACATGAGCTGCATCAAGAAGCAAGCCTTGATGGAGCCTCTTGTTGACACAGTAGACCAGAATCAGATTGCAACGAACTCTCAGCTACTCAAGTCCATGAACATCTCAAAAATGTCCGCAGGAGATTGTTCATTCACAGCACCTTTTAAGCTTGTAGCTGTTCGTGACGATTTTATTCATGCTCTTGTGGCATATTTTGATGTATCATTTACAAAGTGTCATAAATTGATGGGCTTTTCAACAGGGCCAAAATCGCGGAGTACGCATTGGAAACAAACAGTCCTATATCTGGAAGATGTCTTGACCATTTGTGAGGGGGAGACAATTGTAGGGAGTATGACTGTGGCCCCAAATAAAAAGAATCCTCGTGATGTTGATATAATGCTCAAGTATTCATTGAATGGAAGGCGATGCAATGCTTCGAGGGTTCAATATTACAAGATGCGTTGA 1173 0.3947 MGRRRNKNQTNQEENKSNNNNNNNNNMDNNNHLRFQDADEVIEDAAETSNLDQSMGGCELDDSNDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVIYQNKFLFKNKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMADRAKEIVEANGFSEVITVLKGKIEELELPVPKVDIIISEWMGYFLLFENMLNSVLYARDKWLVDDGVILPDIASLHITAIEDKDYKEDKIEFWNNVYGFDMSCIKKQALMEPLVDTVDQNQIATNSQLLKSMNISKMSAGDCSFTAPFKLVAVRDDFIHALVAYFDVSFTKCHKLMGFSTGPKSRSTHWKQTVLYLEDVLTICEGETIVGSMTVAPNKKNPRDVDIMLKYSLNGRRCNASRVQYYKMR* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0186 390 Gene3D Vaccinia Virus protein VP39 60 212 IPR029063 -
Tpr5g0186 390 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 69 370 IPR025799 GO:0016274|GO:0018216
Tpr5g0186 390 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1.2-RELATED 38 390 - -
Tpr5g0186 390 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 75 389 IPR029063 -
Tpr5g0186 390 MobiDBLite consensus disorder prediction 12 26 - -
Tpr5g0186 390 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 38 390 IPR025799 GO:0016274|GO:0018216
Tpr5g0186 390 MobiDBLite consensus disorder prediction 1 26 - -
Tpr5g0186 390 CDD AdoMet_MTases 111 211 - -
Tpr5g0186 390 Gene3D - 215 390 - -
Tpr5g0186 390 Pfam Methyltransferase domain 111 183 IPR041698 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0186 Tpr-Chr5 2851699 2855479 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0186 19 352 C2H2 Transcription Factor Family AT3G12270 35.955 2.00e-64 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0186 K11434 - gmx:100781777 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0186 5 2851699 2855479 Tpr5g0186 5 2851699 2855479 ECH