Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0184 ATGAGAGGAAAGGGAACGATTGTGCCACCGAGTTATTCTAGCGGTGGAAAAGTTCTTCCAAGAGAGAAATTTGATGCTACTTCATCTTCTTCAAGATATGATGATATGGAAGTTCATGGAAACGGTAAGAGAAATCAAAAACGGAAATGTCTTGAAGAGTTGTATACAACAAGTCGCATTGTAAATGATGGTCCTGCTTTGGGGCGCGAGTTCGATTCTCTTCCTTCAGGATCCAAAAATTACACTGCTGCGTGTCAACAGGACCAAGAGCCCGTCAAAAGGAGAAAGGCTTCCAAGAATGCAATTCAAAATCGTCCTAATTGTAATACGAAAGAACCTGTGAAGAAACATGGTATGGGCAAAGGTCTGATGGCAGTTTGGAGGGCAACAAATCCTGATGCCAGAAACACTCCAGTTGGTTTTGGGTTTGCTGACCGAGAAGTTCATCTAACCTCTAATTCTAAAACACCAATGTCGACCAACAGGCCACGGAAAGCAGTAACCACAAATGCAAAACCAAGAAATAAGATTCCAAATAGGAAAACTACATTACAGGAGAAGAGGAAACAGTTCGTGCAAAATAGAGTGGGTGAATCAAACCAATATGTGACTCAAAACCAGCCTCCCATAGAAAAATGTGAACTTGCTTTAGATAACTCAATATCCGAGGAGGGCTTTGATCAAATTTCAATGTTAATCGATGATGAAGAGTTAGAGCTGAGAGAGTTACAAGAAGGAACTAATCTGTTTATTTGTTCAGATCAACTATCTGCCAGTGGAATGCTTGGTGGCTCACTTTGTCCAGATGTGCTAGTCAAGTTCCCCCCAGGTGCTATCAAGATGAAGAAACCTATACATTTGCAACCTTGGGACTCCTCCCCAGAATTGGTGAAGAAATTATTTAAGGTGTTCCACTTCATTTATACATACGCTGTAGTTGTTGATGTTTGTCCCTTCACTCTCGATGAGTTTGTTCAGGCATTTCATGATAAGGATTCAATGTTACTTGGAAAGATTCATGTGGCCCTTCTCACACTGCTTCTATCTGACATCGAAGTTGAGCTTTCTAATGGGTTTTGTCCTCAGTTAAATAAGTCATGCAACTTTCTTGCGCTACTTCACTCCGTTGAAAATCAAGAATATTCCCTTGACGTTTGGAGAAGATCTCTAAACCCTCTTACTTGGATTGAAATACTCCGTCAAGTGCTGGTAGCTGCTGGATTCGGTTCCAAGCAAGGTTCCTTACGAAGAGATGGCCTTGGCAAGGAATTGGATATTCTTGTAAACTATGGCCTATGCCCTGGCACCTTGAAGTGTGAGTTGTTTAAAATCTTGTCAGAACGAGGTAACAATGGGTGCAAAGTTTCTGAGCTGGCAAAGTCAATGCAGATTGCAGAATTAAACCTTGCCAGCACAACAGACGAACTAGAGTCTTCAATATATTCCACACTTTCAAGTGATATTACTTTATTTGAAAAGATTTCATCGTCTGCATATCGATTGCGTATGAGCACTGTTTCAAAGGACAATGATGATTATGAGTCAGATACAGAGGACTCTGGAAGTGTTGATGATGAGCTTAACAATGATACATGTAGCAGTGGAGATGATTTTGAAAGCGGTTCAATAAACTCTAATATAAGAAAATTTAAGCGTGATAACAATCGTAAAGTTAAACATAATAGGCTGAAAGTTTACACTGAAATTGATGAGAGCCGTACAGGAGAAGTGTGGTTGTTAGGACTGATGGATAGTGAATACTCAGATTTGAAAATTGAAGAAAAATTGAATGCGTTGGCAGCGTTGACCGGTCTTGTTTCATCCGGAGCCAGCATCAGGTTGAAGGATCCTGTAAAAGTTACAGCTGATTGTAGTTCTAGTATCCCATTACGTGGTTCTGGAGCAAAAATTAAGAGATCAGTGGTAAAGAAGCCCGGTTCGTTTTTTAACCCAATTGAACAAATGCAATGTATTAAGGAGGTTCACATGAATTCTCACCCCGGTCCAGTAGATTCCTCATTGTTAGTCTCAAAATTCCATACGCTGGAGGCAACCTTTAAGAAAAGAAAAGGTTCAGATGATTCACACCCCATACAATCAGTGTTTTTGGGATCTGATCGTCGGTACAATAGATACTGGCTCTTCTTAGGCCCTTGTAATGTAGGTGATCCTGGCCACAGGAGGGTATACTTTGAATCCTCTGAAGATGGCCACTGGGAGGTGATTGATACAGAAGAGGCATTGTGTGCATTGTTGTCAGTTCTGGATGATAGAGGGAAACGTGAGGCTCTTCTTATTGAATCTTTGGAGAGACGGCAAACATCTCTATGCAGATATATGTCCAGGATTAAGGTTAACGATATTGGAATGAGGTGTATGTCACATTCTGATCAGTCTGAGCTGGATAGGGTTACAGAAGATAGCTGTTCTCCAGTATCTGATGTAGAGAACCTGAATCTGGCTGAGTCTGCTAGAGACTCTATGCCGTCATCTGGGGCAGTGGTAATTGAAGCTGGGAAGAAAGCAGAGGAACAACTGGAAAAATGGATCCGTGTTCAAAATTACGATTCATGGATTTGGAATTCATTTTATTTAGATCTCAATGTTGTAAAATATGGCAGAAGGTCTTATCTTGACTCTCTCGCCAAGTGTAGGAGTTGCCATGATCTATACTGGAGAGATGAGAGACACTGTAAACTTTGCCATATGACATTTGAACTTGATTTTGACCTAGAAGAAAAATATGCAATCCACATAGCCATGTGCAGGGAGAAAGAAGATAGCAATACATTTCCGAATCATAAAGTCTTGTCATCCCAGATTCAATCATTGAAAGCTGCAATTTATGCAATTGAGTCTGTTATGCCTGAAGATGCCCTTGTTGGCGCGTGGAGGAAGTCTGCCCATAATCTATGGATCAAAAGGCTTAGACGCACCTCGACTTTAGTGGAGCTTTTGCAGGTTCTTGCTGATTTTGTTGGTGCCATCAACGAGGGCTGGTTATTTCAGTGCAAATTTCCAGATGGCGTGGTTGAAGAAACAATTGCATCTTTTGCATCAATGCCCCATACTTCATCTGCCCTTGCTCTGTGGTTGGTGAAGTTAGATGCCATAATTGATCCTTATCTCGACAGAGTCCAAACTCAGAAGAAACAGGGAAATGGTAAGCATGGTTCTGGCTGA 3183 0.4119 MRGKGTIVPPSYSSGGKVLPREKFDATSSSSRYDDMEVHGNGKRNQKRKCLEELYTTSRIVNDGPALGREFDSLPSGSKNYTAACQQDQEPVKRRKASKNAIQNRPNCNTKEPVKKHGMGKGLMAVWRATNPDARNTPVGFGFADREVHLTSNSKTPMSTNRPRKAVTTNAKPRNKIPNRKTTLQEKRKQFVQNRVGESNQYVTQNQPPIEKCELALDNSISEEGFDQISMLIDDEELELRELQEGTNLFICSDQLSASGMLGGSLCPDVLVKFPPGAIKMKKPIHLQPWDSSPELVKKLFKVFHFIYTYAVVVDVCPFTLDEFVQAFHDKDSMLLGKIHVALLTLLLSDIEVELSNGFCPQLNKSCNFLALLHSVENQEYSLDVWRRSLNPLTWIEILRQVLVAAGFGSKQGSLRRDGLGKELDILVNYGLCPGTLKCELFKILSERGNNGCKVSELAKSMQIAELNLASTTDELESSIYSTLSSDITLFEKISSSAYRLRMSTVSKDNDDYESDTEDSGSVDDELNNDTCSSGDDFESGSINSNIRKFKRDNNRKVKHNRLKVYTEIDESRTGEVWLLGLMDSEYSDLKIEEKLNALAALTGLVSSGASIRLKDPVKVTADCSSSIPLRGSGAKIKRSVVKKPGSFFNPIEQMQCIKEVHMNSHPGPVDSSLLVSKFHTLEATFKKRKGSDDSHPIQSVFLGSDRRYNRYWLFLGPCNVGDPGHRRVYFESSEDGHWEVIDTEEALCALLSVLDDRGKREALLIESLERRQTSLCRYMSRIKVNDIGMRCMSHSDQSELDRVTEDSCSPVSDVENLNLAESARDSMPSSGAVVIEAGKKAEEQLEKWIRVQNYDSWIWNSFYLDLNVVKYGRRSYLDSLAKCRSCHDLYWRDERHCKLCHMTFELDFDLEEKYAIHIAMCREKEDSNTFPNHKVLSSQIQSLKAAIYAIESVMPEDALVGAWRKSAHNLWIKRLRRTSTLVELLQVLADFVGAINEGWLFQCKFPDGVVEETIASFASMPHTSSALALWLVKLDAIIDPYLDRVQTQKKQGNGKHGSG* 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0184 1060 MobiDBLite consensus disorder prediction 27 45 - -
Tpr5g0184 1060 PANTHER OS07G0619600 PROTEIN 37 1052 - -
Tpr5g0184 1060 MobiDBLite consensus disorder prediction 150 178 - -
Tpr5g0184 1060 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 699 772 IPR028941 -
Tpr5g0184 1060 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 37 1052 IPR044977 GO:0006357
Tpr5g0184 1060 ProSiteProfiles DDT domain profile. 294 353 IPR018501 -
Tpr5g0184 1060 Pfam DDT domain 295 350 IPR018501 -
Tpr5g0184 1060 SMART testlast3 294 353 IPR018501 -
Tpr5g0184 1060 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 575 613 IPR028942 -
Tpr5g0184 1060 MobiDBLite consensus disorder prediction 150 186 - -
Tpr5g0184 1060 MobiDBLite consensus disorder prediction 507 528 - -
Tpr5g0184 1060 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0184 Tpr-Chr5 2804119 2812267 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0184 214 614 Homeobox Transcription Factor Family AT5G44180 30.572 3.08e-45 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Tpr5g0184 WSD 2.7e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0184 - - aprc:113853612 1630.92