Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0176 TATCTTCTTGCGGCTGCACAACAACACAACAGCACATATATACAGCAACCTGTGCATGGGGCGCAGGAACTGGCGCATCATGCGCAAGTTCCAGCAACCTGCCCCCATTCTGCGCCTCATGCCCCAATAGCTGCGCATGGTGCGCAAATTCCAGCAGCACCAACAATTTTGATCATTGTTTCTTGGAATGGATCTCCTTTGATTGAATCTGTTGTACCAATATACTTGGAAGCGACCACTGTTTTTAGTTTTAAGTTGTTGGTCATAGACGAACATCGAATTTCAATACATAGAACCGAAGATTCGACGCTTCCGCCTATTCTTAATGCGGTGGAGATTTATGTAGTAAGACAACGTGATGCGCTCCCAACATTTGAAGAAGATGTTGAAGCTATAAGTGATGTAAAAGAAAGTTATAGAGTACAAAGAAATTGGGTTGGTGATCCATGTGAACCTAAAAACTACAGTTGGGTGGGCTTAAAATGCAACTACAGCACTTCACTTCCTCCAAGAATTGTATCATTGAATCTGAGCAGAAGCAATCTGAGTGGAATAATAACTCCTGCCATTTCCAATTTGGCTTTCTTGGAATCTTTGGATTTATCTAACAATAACTTAACTGGATCAATGCCTCAGTTTTTGGAAGAATTGAAGTCCCTTAAATATTTGAATTTAAGAGGCAATCAGCTTTCAGGTTTTGTCTCTACCAATCTACAAGAAAGATCGAAGAATGGATTACTTTCTTTGAGGGTGGATGATAAAAATCTCTCTGGTTCAAGTAACAAAAAGAAAGTGATTGCTCCCATTATTGCATCACTAACATCGGTTTTAGTTCTATTAGTCATTGCCATTCTCTATTGGAAGCATAGAAGAAGAAATGAAACATCAAAGGAGGAGATGAATATGATCAACATAGGATCAGGTACTGTAGTATCAAAGAAGTTGCAATACACTTATGCTGAGGTGATGGACATCACTAGCAACTTTGAACTGGTCATTGGGAGGGGAGGATTTGGAAGTGTGTATTGTGGTCAAATGAAAGATGGCAATAAAGTTGCAGTCAAGATGCTTTCTTCATCTTCAACTCAGGGTCCAAAGGAATTTCGAACTGAGGCTGAACTATTGATGACAGTTCATCACAAAAATTTGGTATCCTTCATTGGCTATTGTGATGAAGGTGATAAGATGGCACTCATATATGAGCACATGGCTAATGGAAACCTAAAAGAATGTCTCTCAGAAAATCATTCACATTGCTTGAGTTGGGAAAGGAGACTTCTAATAGCAATTGATGCTGCAGAAGGATTGGATTACCTACACCATGGATGCAAGCCACCTATAATACACAGAGATGTAAAATCAGCCAACATTCTTCTAAGTGAAGATTTAGAAGCTAAGATAGCAGATTTTGGACTCTCTAAGGTTTTTAAGAATAGTGATAATCAAAATGCAGATTCACAACAAAAAATTTCTTACTTAACAATCTATTTTATATTAGAATATGCATTTAAATTAAGAGCTTAA 1524 0.3819 YLLAAAQQHNSTYIQQPVHGAQELAHHAQVPATCPHSAPHAPIAAHGAQIPAAPTILIIVSWNGSPLIESVVPIYLEATTVFSFKLLVIDEHRISIHRTEDSTLPPILNAVEIYVVRQRDALPTFEEDVEAISDVKESYRVQRNWVGDPCEPKNYSWVGLKCNYSTSLPPRIVSLNLSRSNLSGIITPAISNLAFLESLDLSNNNLTGSMPQFLEELKSLKYLNLRGNQLSGFVSTNLQERSKNGLLSLRVDDKNLSGSSNKKKVIAPIIASLTSVLVLLVIAILYWKHRRRNETSKEEMNMINIGSGTVVSKKLQYTYAEVMDITSNFELVIGRGGFGSVYCGQMKDGNKVAVKMLSSSSTQGPKEFRTEAELLMTVHHKNLVSFIGYCDEGDKMALIYEHMANGNLKECLSENHSHCLSWERRLLIAIDAAEGLDYLHHGCKPPIIHRDVKSANILLSEDLEAKIADFGLSKVFKNSDNQNADSQQKISYLTIYFILEYAFKLRA* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0176 507 Gene3D Ribonuclease Inhibitor 115 282 IPR032675 -
Tpr5g0176 507 Gene3D Transferase(Phosphotransferase) domain 1 404 501 - -
Tpr5g0176 507 Pfam Leucine rich repeat 171 230 IPR001611 GO:0005515
Tpr5g0176 507 Pfam Malectin-like domain 60 115 IPR024788 -
Tpr5g0176 507 Gene3D Phosphorylase Kinase; domain 1 333 403 - -
Tpr5g0176 507 PANTHER OS07G0107800 PROTEIN-RELATED 75 482 - -
Tpr5g0176 507 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE 75 482 - -
Tpr5g0176 507 SUPERFAMILY Protein kinase-like (PK-like) 311 482 IPR011009 -
Tpr5g0176 507 SMART serkin_6 327 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0176 507 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Tpr5g0176 507 Pfam Protein tyrosine and serine/threonine kinase 331 490 IPR001245 GO:0004672|GO:0006468
Tpr5g0176 507 PRINTS Leucine-rich repeat signature 196 209 - -
Tpr5g0176 507 PRINTS Leucine-rich repeat signature 217 230 - -
Tpr5g0176 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Tpr5g0176 507 ProSiteProfiles Protein kinase domain profile. 327 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0176 507 SUPERFAMILY L domain-like 132 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0176 Tpr-Chr5 2733672 2737451 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0176 68 484 Receptor kinase-like Gene Family AT2G19210 48.372 1.31e-123 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Tpr5g0176 PK_Tyr_Ser-Thr 2.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0176 - - gmx:100793137 613.224