Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0157 ATGGAAGGAGTGGAGAGCAAACCAAATATGAACAAAACATTCCACGTCAATCTCTCTATCCTCACATTTAAAGCAACATTACATCACAAGCCTAAAAAATGTGAACATAAAAAACAAAGCAAAACAAAAAAACACAAACAAAGGAAGAAGAGTAACAAATTGAAGAAGAAGAAGAAGAAAAATAACAAAATGTCGTGGCAAACTTATGTGGATGAACATTTGATGTGTGATATCGATGGCACAGGACATCAACTCACCGCCGCCGCCATTCTTGGCCATGACGGTTCTGTTTGGGCTCAAAGCACTTCCTTCCCTCAGTGTAAACCTGATGAGATTACTGGTATCATGAAAGATTTTGATGAACCTGGCTATCTTGCACCTACTGGCTTACATCTTGGGGAAGTTAAGTATATGGTTATTCAGGGAGAGGCTGGAGCTGTCATTCGTGGAAAGAAGGGATCTGGAGGAATAACCATAAAGAAAACTGGTCAAGCTCTAGTTTTTGGCATCTATGAGGAACCTGTTACACCTGGACAATGTAACCTGGTTGTTGAGAGGTTGGGAGATTATCTTGTTGATCAAGGTCTTTAG 591 0.4027 MEGVESKPNMNKTFHVNLSILTFKATLHHKPKKCEHKKQSKTKKHKQRKKSNKLKKKKKKNNKMSWQTYVDEHLMCDIDGTGHQLTAAAILGHDGSVWAQSTSFPQCKPDEITGIMKDFDEPGYLAPTGLHLGEVKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNLVVERLGDYLVDQGL* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0157 196 Gene3D Dynein light chain 2a, cytoplasmic 62 196 - -
Tpr5g0157 196 PANTHER PROFILIN 64 196 - -
Tpr5g0157 196 PANTHER PROFILIN 64 196 IPR005455 GO:0003779
Tpr5g0157 196 SUPERFAMILY Profilin (actin-binding protein) 65 195 IPR036140 -
Tpr5g0157 196 CDD PROF 65 195 IPR005455 GO:0003779
Tpr5g0157 196 PRINTS Profilin signature 66 75 IPR005455 GO:0003779
Tpr5g0157 196 PRINTS Profilin signature 86 95 IPR005455 GO:0003779
Tpr5g0157 196 PRINTS Profilin signature 105 125 IPR005455 GO:0003779
Tpr5g0157 196 PRINTS Profilin signature 129 143 IPR005455 GO:0003779
Tpr5g0157 196 PRINTS Profilin signature 165 178 IPR005455 GO:0003779
Tpr5g0157 196 PRINTS Profilin signature 178 195 IPR005455 GO:0003779
Tpr5g0157 196 PRINTS Plant profilin signature 64 77 IPR005455 GO:0003779
Tpr5g0157 196 PRINTS Plant profilin signature 92 105 IPR005455 GO:0003779
Tpr5g0157 196 PRINTS Plant profilin signature 117 131 IPR005455 GO:0003779
Tpr5g0157 196 PRINTS Plant profilin signature 136 145 IPR005455 GO:0003779
Tpr5g0157 196 PRINTS Plant profilin signature 149 164 IPR005455 GO:0003779
Tpr5g0157 196 PRINTS Plant profilin signature 169 182 IPR005455 GO:0003779
Tpr5g0157 196 PRINTS Plant profilin signature 182 195 IPR005455 GO:0003779
Tpr5g0157 196 SMART prof_2 64 196 IPR005455 GO:0003779
Tpr5g0157 196 Pfam Profilin 64 195 IPR005455 GO:0003779
Tpr5g0157 196 MobiDBLite consensus disorder prediction 29 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0157 Tpr-Chr5 2340851 2342837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0157 64 196 Cytoskeleton Gene Families AT4G29340 80.597 9.79e-78 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0157 K05759 - cpap:110812462 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0157 5 2340851 2342837 Tpr5g0157 5 2340851 2342837 ECH