Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0141 ATGATGACACCGAAATTGAAGTATGATGTTTTTGTTAGCTTTAGAGGTCAAGACACACGCAACAATTTCGCGGATCATCTTTTTGCTGCCTTTCAAAGAAAAGGAATTTTAGCATTCAGAGATGATACTAAGATTCAGAAAGGGGAATCCATAGCACCTGAACTCCTTCGTGCAATTGAAGGATCTGAGATTTTCATTGTGATCTTCTCAAAACACTATGCTTCTTCAACATGGTGCTTGCGAGAATTGGAATCTATCCTTCATTGTAGTCAAGTTTCTGGAAGACGTGTTCTTCCTGTTTTCTATGATGTTGATCCTTCTGATGTGAGACATCAAAAAGGAAGTTATGCTGAAGACCTTGCCAAACATGAGGAAAGATTTCAACATGACTCAGATTTAGTGCAAAGATGGAGGGAAGCTTTAACACAAGTCGCCAATTACTCTGGTTGGGATATGCGTCATAAGGCTCAAAATGCAGAGATTGAAAAGATTGCTGAAGAGATAATGAATATATTATTGGGTCACAAATTTTCATATCTTCCAAAAGATTTAATTGGGATAAATTTACCTATTGAGAAAGTAGTAAATCTATTACTTTTAGACTCACTTGATGATGTTCGGGTTGTAGGAATTTGTGGGATGGGTGGAGTAGGGAAGACAACTCTTGCTACTGCTTTATTTGGTCAAATCTCTCATCAATTTGATGCTCGTTGTTATATTGATGATCTAAGCAAAATATATAGACATGATGGTCCAATTGGTGCACAAAAGCAAATCCTACACCAAACTCTTGGTGGGGAACCCTTTCAGATATGCAATCTCTATGACACGGCTAACTTGATACAAAGTAGGCTTCGTCGCCTGCGAGCACTTATAATTCTTGACAATGTTGATAAAGTTGATCAACTCGATAAGTTAGCCGTGAATCGTGAATGGTTAGGTGCAGGGAGTAGAATCATTATAATTTCTAGAGATGAGCATATCTTGAAAGCATATGGAGTGGATGCAGTTTACAAAGTTCCACTCTTGAATGAGACTAACTCCGTTCAATTATTTTGTCGAAAAGCTTTCAAACTTGACAATATTTTGAGTAGTTATGAGGGGTTGGTCAATGGCATACTACATTATGCCAAAGGCTTACCACTAGCAATTAAAATATTGGGTTCATTTTTGTTTGGTCGAGATATATCTGAATGGAAAAGTGCATTGTCTAGATTGAGAGAAAGTCCAAACAAAGATGTCATGGATGTGTTACAATTAAGTTTTGATGGGTTGGAGGAATTGGAAAAAGAAATATTTCTTGATATTGCTTGTTTTTTCAATGGGTGCCAGGAGAGTTATGTCAAAAAAGTTCTAAATTGCTGTGGATTTCATGCTGATATTGGTTTAAGAGTTCTAATTGATAAATCACTTCTAAGCATATCTGACGATCAAATTATAATAATGCATAGTTTGTTAGCAGAGTTGGGCAAAAACATTGTCCAAGAAATTTCAACCAAAGAATCAAGAAAGTGGACGAGGGTGTGGCTCCACAAACAACTCCAAAATGTTATGTTAGAGAATGTGGAAAGGAAGGTTGAAGCCATAATTTTTTATAGATTTTCAACGGACCAAGAAACAGACAAATTGATCATGGGTGAAACATTGTCAAAAATGAGTCATCTTAGATTGCTCAGCTTGACGAACATAATTATTTTAGGAAACCTCAGCTACCTCTCTAATGAGTTAAGATATGTGGAGTGGAATTGGTATCCTTTCAAGTATTTGCCGCCATGTTTTCATCCCAATCAACTTGTTGAATTGAACTTGACGGATAGCAGCATCAAACAACTATGGAAAGATAAGAAGTATTTGCCCAATTTGAGAAGGTTGGATCTAAGACACTCAAAAAATCTAAGAAAGATGCCAGATTTTGGGGATATTCCAAACCTTGAGGAGCTAGATCTTAAAGGTTGTATAAAGCTTGTGCAAATAGATCCATCTATCGGGGTTCTAAAAAAGCTTTATTACTTAAGTTTGAAAGATTGCAAAAATCTAGTAAACATACCAAACAACATATTTGGTCTCACCTCTCTTCAATATCTAAATCTTTCGGGGTGTCCCAAAATGAATAAGAATCCAATTCCAAGGCAATCAAGAACTTCCTTCTGGAAACGGACCACAATTGGTTTACGTTCCTTTTACGGTTATCATGAAGGTTTAGCTAGTTCTTTGGTGCCTTCTTTTCTTAGCTTATATTGTTTGAGTGAAGTTGATATCAGTTTCTGTGGTCTAAGCCAACTCCCAAGTGCAATTGGATGTCTACGTCAACTCGTAAGATTAAATATAAGCGGGAACAATTTTGTGACACTACCTAACCTGAAGGAGCTTTCCAACCTTGAATATTTAAACTTACAGCATTGCATGCTTTTGGAATCTTTGCCTCAGCTTCCTTTGCCTACTTTTTTTGATCATATGACAAAACATAAAACCACTTTCAAGCATATGAAAAATTATTATTATAAGAGGAAAGTAGGACTGGTCATTTTCAATTGTCCTAAGTTGGGTGAGAGTGAATATTGTGATAACATTGCATTTTCATGGATGACACAATTCATTTGGGCAAGACAGCAGTCGTCTAGTGCCTTCTTTTATGGGAATTTAATTGATATTGTTATTCCTAGAAGTGAAATACCAATTTGGTTCAAAAATCAGAGCGAGAGTGGTTCAATAAGAATGGAACTATCTACCATTATGAACAATAATTGCATTGGCATTGCTTGTTGTGTGGTATTTTCTGTTGAACCTTCTGATCGAACTGTCGAAGCTTCTGATAGTAATTCGGGTATATTTTATGAATTTCATAATAATAGTAATAGATTGTGTTGGTCTGATGGTATTGGTGTAATTTTAGAAAGAGGTCTTATTCTGGTCAAATCAAATCACATGTACCTATTCTATATTCCTAAGAGATCATTCTTTGATATTATGAAGTCGATTGACCAACCTCTAACCGATCTTGATTATATCATTTTCAAAGCTGGCATTTATAATGACAAAGGTAGTGATTTGGAGGTGCAGCATTGTGGGTATCGTTTGGTATATGAACATGATCTACAAGACTTGAACTTAACAATGATGCATCCCGAAAATCTGTCAACTCATAAGGGCGAGTTTTTGGCAATTGAAGATGAGGCACAACCATGA 3186 0.361 MMTPKLKYDVFVSFRGQDTRNNFADHLFAAFQRKGILAFRDDTKIQKGESIAPELLRAIEGSEIFIVIFSKHYASSTWCLRELESILHCSQVSGRRVLPVFYDVDPSDVRHQKGSYAEDLAKHEERFQHDSDLVQRWREALTQVANYSGWDMRHKAQNAEIEKIAEEIMNILLGHKFSYLPKDLIGINLPIEKVVNLLLLDSLDDVRVVGICGMGGVGKTTLATALFGQISHQFDARCYIDDLSKIYRHDGPIGAQKQILHQTLGGEPFQICNLYDTANLIQSRLRRLRALIILDNVDKVDQLDKLAVNREWLGAGSRIIIISRDEHILKAYGVDAVYKVPLLNETNSVQLFCRKAFKLDNILSSYEGLVNGILHYAKGLPLAIKILGSFLFGRDISEWKSALSRLRESPNKDVMDVLQLSFDGLEELEKEIFLDIACFFNGCQESYVKKVLNCCGFHADIGLRVLIDKSLLSISDDQIIIMHSLLAELGKNIVQEISTKESRKWTRVWLHKQLQNVMLENVERKVEAIIFYRFSTDQETDKLIMGETLSKMSHLRLLSLTNIIILGNLSYLSNELRYVEWNWYPFKYLPPCFHPNQLVELNLTDSSIKQLWKDKKYLPNLRRLDLRHSKNLRKMPDFGDIPNLEELDLKGCIKLVQIDPSIGVLKKLYYLSLKDCKNLVNIPNNIFGLTSLQYLNLSGCPKMNKNPIPRQSRTSFWKRTTIGLRSFYGYHEGLASSLVPSFLSLYCLSEVDISFCGLSQLPSAIGCLRQLVRLNISGNNFVTLPNLKELSNLEYLNLQHCMLLESLPQLPLPTFFDHMTKHKTTFKHMKNYYYKRKVGLVIFNCPKLGESEYCDNIAFSWMTQFIWARQQSSSAFFYGNLIDIVIPRSEIPIWFKNQSESGSIRMELSTIMNNNCIGIACCVVFSVEPSDRTVEASDSNSGIFYEFHNNSNRLCWSDGIGVILERGLILVKSNHMYLFYIPKRSFFDIMKSIDQPLTDLDYIIFKAGIYNDKGSDLEVQHCGYRLVYEHDLQDLNLTMMHPENLSTHKGEFLAIEDEAQP* 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0141 1061 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 630 689 IPR044974 GO:0006952
Tpr5g0141 1061 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 621 IPR044974 GO:0006952
Tpr5g0141 1061 Gene3D - 342 426 IPR042197 -
Tpr5g0141 1061 SMART AAA_5 205 344 IPR003593 -
Tpr5g0141 1061 Pfam TIR domain 7 168 IPR000157 GO:0007165
Tpr5g0141 1061 Gene3D - 2 169 IPR035897 -
Tpr5g0141 1061 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 150 IPR035897 -
Tpr5g0141 1061 Pfam NB-ARC domain 191 412 IPR002182 GO:0043531
Tpr5g0141 1061 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 436 IPR027417 -
Tpr5g0141 1061 PRINTS Disease resistance protein signature 208 223 - -
Tpr5g0141 1061 PRINTS Disease resistance protein signature 284 298 - -
Tpr5g0141 1061 PRINTS Disease resistance protein signature 377 391 - -
Tpr5g0141 1061 PRINTS Disease resistance protein signature 616 632 - -
Tpr5g0141 1061 SUPERFAMILY L domain-like 544 809 - -
Tpr5g0141 1061 ProSiteProfiles TIR domain profile. 6 172 IPR000157 GO:0007165
Tpr5g0141 1061 Pfam C-JID domain 887 1032 IPR045344 -
Tpr5g0141 1061 SUPERFAMILY "Winged helix" DNA-binding domain 413 515 IPR036390 -
Tpr5g0141 1061 ProSiteProfiles Leucine-rich repeat profile. 770 791 IPR001611 GO:0005515
Tpr5g0141 1061 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 5 621 - -
Tpr5g0141 1061 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 630 689 - -
Tpr5g0141 1061 Gene3D - 170 337 IPR027417 -
Tpr5g0141 1061 Gene3D Ribonuclease Inhibitor 723 858 IPR032675 -
Tpr5g0141 1061 Gene3D Ribonuclease Inhibitor 538 721 IPR032675 -
Tpr5g0141 1061 SMART till_3 7 147 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0141 Tpr-Chr5 2124108 2144001 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0141 8 808 WRKY Transcription Factor Family AT4G12020 29.354 3.42e-87 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0141 - - mtr:MTR_4g080070 1196.42