Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0139 ATGGCTTGCAGTATCATCCAAACAAACGCTTCTTCTTCGTCTTCTTCTTCTTCTTCTATGATGACATTGAAGTATGATGTTTTTGTTAGCTTTAGAGGTCAAGACATACGCAACAATTTCGCCGATCATCTTTTTGCTGCCTTTCGAAGAAAAGGGATTTTAGCATTCAGAGATGACACTAAGATTCAGAAAGGGGAATCCATAGCACCTGAACTCCTTCGTGCAATTGAAGGATCTGAGATTTTCATTGTGATCTTCTCAAAACACTATGCTTCTTCAACATGGTGCTTGCGAGAATTGGAATCTATCCTTCATTGTAGTCAAGTTTCTGGAAGACGTGTTATGCCTGTTTTCTATGATGTTGATCCTTCTGATGTGAGACATCAAAAAGGAAGTTATGCTGAAGACCTTGCCAAACATGAGGAAAGATTTCAACATGACTCAGATTTAGTGCAAAGATGGAGGGAAGCTTTAACACAAGTAGCCAATTACTCTGGTTGGGATATGCGTCATAAGGCTCAAAATGCAGAGATTGAAAAGATTGCTGAAGAGATAATGAATATATTATTGGGTCACAAATCTTCATATCTTCCAAAAGATTTAATTGGGATAAATTTACCTATTGAGAAAGTAGTAAATCTATTACTTTTAGACTCACTTGATGATGTTCGGGTTGTCGGAATTTGTGGGATGGGTGGAGTAGGGAAGACAACTCTTGCTACTGCTTTATTTGGTCAAATCTCTCATCAATTTGATGCTCGTTGTTTTATTGATGATCTAAGCAAAATATATAGACATGATGGTCCAATTGGTGCACAAAAGCAAATCCTACACCAAACTCTTGGTGTGGAATCCTTTCAAATATGCAGTCTCTATGACACGGCTAACTTGATACAAAGTAGGCTTCGTCGCCTGCGAGCACTTATAATTCTTGACAATGTTGATAAAGTTGAACAACTCGATAAATTAGCCGTGATTCGTGAATGGTTAGGTGCAGGGAGTAGAATCGTTATAATTTCTAGAGATGAGCATATCTTGAAAGAGTATGGAGTGGATGTAGTTTACAAAGTTCCACTCTTGAATGAGACTAACTCCCTTCAATTATTTTGTCGAAAAGCTTTCAAACTTGACCATATTTTGAGTAGTCATGAAGGGTTGGTTAATGGCATACTACATTATGCCGAAGGCTTACCACTAGCAATTAAAACATTGGGTTCATTTTTGTTTGGTCGAGATATATCTGAATGGAAAAGTGCATTGTCTAGATTGAGAGAAAGTCCAAACAAAGATGTCATGGATGTGTTACGATTAAGTTTTGATGGGTTGGAGGAATTGGAAAAAGAAATATTTCTTGATATTGCTTGTTTTTTCAATCCGTGCTTTGAGGATTATGTCAAAAAAGTTCTAAATTGCTGTGGATTTAATGCTGATATTGGTTTAAGAGTTCTAATTGATAAATCACTTCTAAGCATGAATGACAATAAAATTATACGAATGCATAGTTTGTTAGAAGAGTTGGGCAAAAACATGGTCCAAGAAATGTCAACCAAAGAATCAAGAAAGTGGACGAGGGTGTGGCTCCACAAACAACTCCAAAATGTTACGTTAGAGAATGTGGAAAGGAAGGTTGAAGCCATAAAATTTGATAGATATTTAAAGGACCAAGAAACAGAAAAATTGATCATGGGTGAAACATTGTCAAAAATGAGTCATCTTAGATTGCTCATATTGAGGAACAGAATTATTTTAGGAAACCTCAGCTACCTCTCTAATGAGTTAAGATATGTGGAGTGGGATAGGTATCCTTTCAAGTATTTGCCGCCATGTTTTCATCCCAATCAACTTGTTGAATTGAACTTGACGGATAGCAGCATCAAACAACTATGGAAAGATAAGAAGTATTTGCCCAATTTGAGAAGGTTGGATCTAACTTACTCAAAAAATCTAAGAAAGATGCCAGATTTTGGGGATATTCCAAACCTTGAGGAGCTAGATCTTAGAGGTTGTATAAAGCTTGTGGAAATAGATCCATCTATCGGGGTTCTAAAAAAGCTTTATTACTTAAGTTTGAAAGATTGCAAAAATCTAGTAAACATACCAAACAACATATTTGGTCTCACCTCTCTTCAATATCTAAATCTTTCGGGGTGTCCCAAAATGAATAAGAATCCAATTCCAAGGCAATCAAGAACTTCCTTCTGGAAACGGACCACAATTGGTTTACGTTCCTTTTACGGTTATCATGAAGGTTTAGCTAGTTCTTTGGTGCCTTCTTTTCTTAGCTTATATTGTTTGAGTGAAGTTGATATCAGTTTCTGTGGTCTAAGCCAACTCCCAAGTGCAATTGGATGTCTACGTCAACTCGTAAGATTAAATATAAGCGGGAACAATTTTGTGACACTACCTAACCTGAAGGAGCTTTCCAACCTTGAATATTTAAACTTACAGCATTGCATGCTTTTGGAATCTTTGCCTCAGCTTCCTTTGCCTACTTTTTTTGAGCATATGAAAAATTATTATTTTGAGAGGAAAGTTGGACTGGTCATTTTCAATTGTCCTAAGTTGGGTGAGAGTGAATATTGTGATAACATTGCATTTTCATGGATGACACAATTCATTTGGGCAAGACAGCAGTCCTCTAGTGCCGTCTTTTATGGGAATTTAATTGATATTGTTATTCCTAGAAGTGAAATACCAATTTGGTTCAAAAATCAGAGCGAGAGTGGTTCAATAAGAATGGAACTATCTACCATTATGAACAATAATTGCATTGGCATTGCTTGTTGTGTGGTATTTTCTGTTGAACCTTCTGATCGAACTGTTGAAGCTTCTAATAAACCATTTTCGAATATATTTTATCAATTTCGTTATAATAATGGTAATGGATGGGGTTGGGAATGTCGTGGTGGTGTAAATTTAGAAAGAGGTCTTATTGTGGTCAAATCAAATCACATGTGCCTATTCTATATTACTAAGAGATCATTCTTTGATACTATGAAGAGGATTGACCAACCTCTCACCGATGATATCATTTTCACAGTTGGCATGATGTATTTTGGCAAAGGTAGTGGTTTTGAGGTGCAGCATTGTGGGTATCGTTTGGTATATGAACATGATCTACAAGACTTCAACTCAACAATGATGCATCCCGAAAATCTGTCAACTCATAAGGACAAGTTTTTGGCAATTGAAGATGAGGCACAACCATGA 3210 0.3648 MACSIIQTNASSSSSSSSSMMTLKYDVFVSFRGQDIRNNFADHLFAAFRRKGILAFRDDTKIQKGESIAPELLRAIEGSEIFIVIFSKHYASSTWCLRELESILHCSQVSGRRVMPVFYDVDPSDVRHQKGSYAEDLAKHEERFQHDSDLVQRWREALTQVANYSGWDMRHKAQNAEIEKIAEEIMNILLGHKSSYLPKDLIGINLPIEKVVNLLLLDSLDDVRVVGICGMGGVGKTTLATALFGQISHQFDARCFIDDLSKIYRHDGPIGAQKQILHQTLGVESFQICSLYDTANLIQSRLRRLRALIILDNVDKVEQLDKLAVIREWLGAGSRIVIISRDEHILKEYGVDVVYKVPLLNETNSLQLFCRKAFKLDHILSSHEGLVNGILHYAEGLPLAIKTLGSFLFGRDISEWKSALSRLRESPNKDVMDVLRLSFDGLEELEKEIFLDIACFFNPCFEDYVKKVLNCCGFNADIGLRVLIDKSLLSMNDNKIIRMHSLLEELGKNMVQEMSTKESRKWTRVWLHKQLQNVTLENVERKVEAIKFDRYLKDQETEKLIMGETLSKMSHLRLLILRNRIILGNLSYLSNELRYVEWDRYPFKYLPPCFHPNQLVELNLTDSSIKQLWKDKKYLPNLRRLDLTYSKNLRKMPDFGDIPNLEELDLRGCIKLVEIDPSIGVLKKLYYLSLKDCKNLVNIPNNIFGLTSLQYLNLSGCPKMNKNPIPRQSRTSFWKRTTIGLRSFYGYHEGLASSLVPSFLSLYCLSEVDISFCGLSQLPSAIGCLRQLVRLNISGNNFVTLPNLKELSNLEYLNLQHCMLLESLPQLPLPTFFEHMKNYYFERKVGLVIFNCPKLGESEYCDNIAFSWMTQFIWARQQSSSAVFYGNLIDIVIPRSEIPIWFKNQSESGSIRMELSTIMNNNCIGIACCVVFSVEPSDRTVEASNKPFSNIFYQFRYNNGNGWGWECRGGVNLERGLIVVKSNHMCLFYITKRSFFDTMKRIDQPLTDDIIFTVGMMYFGKGSGFEVQHCGYRLVYEHDLQDFNSTMMHPENLSTHKDKFLAIEDEAQP* 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0139 1069 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 453 IPR027417 -
Tpr5g0139 1069 SMART till_3 24 164 IPR000157 GO:0007165
Tpr5g0139 1069 Gene3D Ribonuclease Inhibitor 739 865 IPR032675 -
Tpr5g0139 1069 Gene3D Ribonuclease Inhibitor 493 734 IPR032675 -
Tpr5g0139 1069 Gene3D - 359 443 IPR042197 -
Tpr5g0139 1069 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 167 IPR035897 -
Tpr5g0139 1069 PRINTS Disease resistance protein signature 225 240 - -
Tpr5g0139 1069 PRINTS Disease resistance protein signature 301 315 - -
Tpr5g0139 1069 PRINTS Disease resistance protein signature 394 408 - -
Tpr5g0139 1069 PRINTS Disease resistance protein signature 633 649 - -
Tpr5g0139 1069 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 646 707 IPR044974 GO:0006952
Tpr5g0139 1069 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 637 IPR044974 GO:0006952
Tpr5g0139 1069 Gene3D - 189 354 IPR027417 -
Tpr5g0139 1069 Pfam C-JID domain 894 1040 IPR045344 -
Tpr5g0139 1069 Pfam TIR domain 24 189 IPR000157 GO:0007165
Tpr5g0139 1069 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 19 637 - -
Tpr5g0139 1069 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 646 707 - -
Tpr5g0139 1069 SUPERFAMILY "Winged helix" DNA-binding domain 430 531 IPR036390 -
Tpr5g0139 1069 SUPERFAMILY L domain-like 561 866 - -
Tpr5g0139 1069 Gene3D - 20 188 IPR035897 -
Tpr5g0139 1069 Pfam NB-ARC domain 208 429 IPR002182 GO:0043531
Tpr5g0139 1069 ProSiteProfiles TIR domain profile. 23 189 IPR000157 GO:0007165
Tpr5g0139 1069 ProSiteProfiles Leucine-rich repeat profile. 787 808 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0139 Tpr-Chr5 2109326 2116836 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0139 25 825 WRKY Transcription Factor Family AT4G12020 29.562 1.51e-86 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0139 - - mtr:MTR_4g080070 1172.53