Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0138 ATGACAAAATCTATTTTGTTCATTCTAATCTTGTTTTTCTTTTTCACCTATGCAAATTCTCAACAATCTCAATTATACAATGAAGAACATGAAATTCTAATGAAGATAAAAAAGCACTTTCAAAATCCATTATTCCTAAGTCATTGGAATTCATCAAAAACTTCATATCATTGTTCATATCCAGAAATCACTTGCACAAATGATGATTCAATCACTTCACTTTCAATGATCAACACAAACTTAACACAAACACTTCCACCTTTTCTTTGTGAACTCAAAAACCTCACTTACATTGATTTTCAACTCAACTACATACCAAATGAGTTTCCAACATTACTTTACAATTGTTCCAAGCTTCAACATCTTGACCTTTCGCAGAACTATTTTGTCGGTAACATACCGAATGACATCGATAAGTTGGCCAATCTGCAGTTCCTTAGCCTCGCCGCAAACAGCTTTTCAGGTGATATTCCAATGAGTATTGGAAACTTGAAGAATTTAAAAAGACTTGAACTATATCAGTGTCTTTTTAATGGTACTATTCCTGATGAAATCGGTAATTTGTCGAATCTTGAAACTTTGTTGATGTTCTCATATAGTATGCTACCTAGAACAAAGTTACCATCTAGTTTTACTAAGTTGAAAAATTTAAGGATATTTGATATGCATGACTCTAACTTGGTTGGAGAAATTCCTGAAACAATTGGTAAAATGATGGCTTTGGAAGATTTGGATTTATCAGGAAATTTTTTGAGTGGAAAAATTCCAAATGGTTTGTTCATTTTGAAAAATTTGAGCAGACTTATTCTTTATAACAATAGTCTTTCTGGAGATATACCTGATGTGGTTGAAGCGTTTGAGTTAACAACCTTGGATCTTTCGTATAATCATCTCACCGGAAAAATACCAGATGATTTTGGAAATATCAAAAAGCTAAAGTACTTGGCCTTGTTTACAAATCGATTATCCGGCAAGGTACCGGAAAGCATCGGTAATTTGCAGGCTATGACTGATTTTATTGTTTTTCAGAACAATTTATCAGGTAATCTTCCTCAAAGTTTTGGTAGGTTTTCTAAACTTGAAACTTTTCAGATTGCATCTAATAGTTTCAATGGCAAGCTACCACAGAATTTGTGCTATCATGGAAGGTTAGTTGGTTTAACTGCTTATGACAATAATCTAAGTGGTGAGTTGCCGAAATCTTTAGGTAGTTGTAGCAGTTTACAGTATCTGAGACTTGAGAATAATGAGTTTTCTGGTGAAATTCCTAATGGTTTATGGACATCTATGTACTTGACAACAATTAGGATAAGTGAGAACATGTTCACTGGCCAGCTTCCCGACAGATTGGCTCGGAATCTTTCAGAATTAGCCGTAAGTCACAATCGATTTTCAGGTACAATTCCGAATGGAGTTTCTTCTTGGAAGAAGTTAGTGAAGTTCAATGCTAGTAACAACTTTTTCAATGGAAGTATTCCGTCGGAGTTAGCATCTCTTCCTCAGCTAGAAACTCTTCTACTTGATCAAAACCAGCTCACCGGTCAAATTCCAACGGATATAACATCATGGAAGTCTCTAGTAACACTAAACCTCAGCCACAATCAACTATCTGGCGAAATACCAGATGCAATTTGTCGGTTACCTTCGCTAAGTGTGTTGGACTTATCAGAAAACAAAATCTCCGGCCGAATTCCACCTCGGCTATCTTTGAGACTCACAAATCTCAATCTATCATCAAATTATTTGATAGGGCGGATTCCAAGTGATTTCGAAAACCTTGCGTATGAAAGCAGCTTTCTAAACAACTCTGGTCTATGTGTTGATAAATTAGTACTAAACCTTGCTTTGTGCAATTCTGGAACTGCAAGAAGAAGAAGAGGAGACTCAACCATGTCTAAGGCGTTGGTCGTAATCTTGGTGGTAGTAGCTTCTTTAACAGTTTTCTTGGCATTATTCTTGTCAATCAGTTTTTACAGAAAAAGAAAGCGGTTAATGAAAAGGACATGGAAGCTAACTTCATTTCAGAGGCTAAGTTTCACAAAATCAAATATTGTGTCCTCGATGTCAGAACATAATATCATTGGTAGCGGTGGATTTGGTTCTGTTTATCGCGTCGCTGTTGAGGGTTTAGGCTATGTTGCAGTGAAAAAGATCAGAGGAAATAGCAGAAAGTTGGATCAGAAGCTTGTGGATTCATTTCTTGCAGAAGTTGAAATACATAGCAAAATTCGGCATAACAACATTGTGAAGTTGATGTGTTGTATCTCAAGTGATGATTCGCTACTCCTTGAATACGAGTATCATGAACATCAAAGCCTTGATAGGTGGCTGCACAAGAAAAGTAAGTCACCGGCTGTGTCGGGAATTGTAAATGGTAACATCATTGATTGGCCAAAGAGATTGCATATAGCCATTGGAGCTGCACAAGGTTTGTGCTACATGCATAATGATTGCTCGCCGCCTATTGTTCATCGAGATGTGAAAACAAGTAACATTCTTTTGGATTCTCAATTCAATGCAAAAGTTGCCGATTTTGGTTTGGCTAGGATATTGGTCAAGCCGGAAGAACTGGCCACCATGTCGGCTGTGGCTGGAACATTTGGCTATATTGCTCCAGAATATGCTCAAACAATACGAGTCAACGAGAAGATAGATGTCTACAGTTTTGGAGTAGTCCTATTGGAACTGACAACTGGAAAAGAGGCAAATCATGGAGACGAATACTCGTCTCTTGCAGAATGGGCGTGGCACCACATTCAGATAGGAACCAATATAGAAGAACTTCTCGACGACGACGCTATGGAACCTAGTAACTTGGAAGAAATGTGCAGCATCTTCAAACTCGGAGTTATGTGCACTTCAACATTGCCAGCTAGTAGACCATCAATGAAAGAAGTCTTGAAGGTATTGACCGGCTGCAAGGATCCACTCGCCAACGCCGAGAAGATTGTTGATATTTATGATTCTGCTCCACTTCTTAAGAATTTGAAATGGGAAAAGCAGTTGGAATTTTCAGCATAA 3021 0.3754 MTKSILFILILFFFFTYANSQQSQLYNEEHEILMKIKKHFQNPLFLSHWNSSKTSYHCSYPEITCTNDDSITSLSMINTNLTQTLPPFLCELKNLTYIDFQLNYIPNEFPTLLYNCSKLQHLDLSQNYFVGNIPNDIDKLANLQFLSLAANSFSGDIPMSIGNLKNLKRLELYQCLFNGTIPDEIGNLSNLETLLMFSYSMLPRTKLPSSFTKLKNLRIFDMHDSNLVGEIPETIGKMMALEDLDLSGNFLSGKIPNGLFILKNLSRLILYNNSLSGDIPDVVEAFELTTLDLSYNHLTGKIPDDFGNIKKLKYLALFTNRLSGKVPESIGNLQAMTDFIVFQNNLSGNLPQSFGRFSKLETFQIASNSFNGKLPQNLCYHGRLVGLTAYDNNLSGELPKSLGSCSSLQYLRLENNEFSGEIPNGLWTSMYLTTIRISENMFTGQLPDRLARNLSELAVSHNRFSGTIPNGVSSWKKLVKFNASNNFFNGSIPSELASLPQLETLLLDQNQLTGQIPTDITSWKSLVTLNLSHNQLSGEIPDAICRLPSLSVLDLSENKISGRIPPRLSLRLTNLNLSSNYLIGRIPSDFENLAYESSFLNNSGLCVDKLVLNLALCNSGTARRRRGDSTMSKALVVILVVVASLTVFLALFLSISFYRKRKRLMKRTWKLTSFQRLSFTKSNIVSSMSEHNIIGSGGFGSVYRVAVEGLGYVAVKKIRGNSRKLDQKLVDSFLAEVEIHSKIRHNNIVKLMCCISSDDSLLLEYEYHEHQSLDRWLHKKSKSPAVSGIVNGNIIDWPKRLHIAIGAAQGLCYMHNDCSPPIVHRDVKTSNILLDSQFNAKVADFGLARILVKPEELATMSAVAGTFGYIAPEYAQTIRVNEKIDVYSFGVVLLELTTGKEANHGDEYSSLAEWAWHHIQIGTNIEELLDDDAMEPSNLEEMCSIFKLGVMCTSTLPASRPSMKEVLKVLTGCKDPLANAEKIVDIYDSAPLLKNLKWEKQLEFSA* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0138 1006 Gene3D Ribonuclease Inhibitor 203 338 IPR032675 -
Tpr5g0138 1006 Gene3D Ribonuclease Inhibitor 339 614 IPR032675 -
Tpr5g0138 1006 ProSiteProfiles Protein kinase domain profile. 688 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0138 1006 Pfam Leucine Rich Repeat 571 593 IPR001611 GO:0005515
Tpr5g0138 1006 Pfam Leucine Rich Repeat 288 308 IPR001611 GO:0005515
Tpr5g0138 1006 Pfam Leucine Rich Repeat 118 140 IPR001611 GO:0005515
Tpr5g0138 1006 Pfam Leucine Rich Repeat 241 259 IPR001611 GO:0005515
Tpr5g0138 1006 ProSiteProfiles Leucine-rich repeat profile. 549 571 IPR001611 GO:0005515
Tpr5g0138 1006 PRINTS Leucine-rich repeat signature 288 301 - -
Tpr5g0138 1006 PRINTS Leucine-rich repeat signature 547 560 - -
Tpr5g0138 1006 SMART LRR_typ_2 499 523 IPR003591 -
Tpr5g0138 1006 SMART LRR_typ_2 262 288 IPR003591 -
Tpr5g0138 1006 SMART LRR_typ_2 547 571 IPR003591 -
Tpr5g0138 1006 SMART LRR_typ_2 164 188 IPR003591 -
Tpr5g0138 1006 SMART LRR_typ_2 405 429 IPR003591 -
Tpr5g0138 1006 Gene3D Phosphorylase Kinase; domain 1 670 767 - -
Tpr5g0138 1006 Pfam Protein kinase domain 690 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0138 1006 Pfam Leucine rich repeat 522 560 IPR001611 GO:0005515
Tpr5g0138 1006 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 7 998 - -
Tpr5g0138 1006 CDD STKc_IRAK 694 972 - -
Tpr5g0138 1006 ProSiteProfiles Leucine-rich repeat profile. 525 547 IPR001611 GO:0005515
Tpr5g0138 1006 Gene3D Transferase(Phosphotransferase) domain 1 769 988 - -
Tpr5g0138 1006 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Tpr5g0138 1006 SMART serkin_6 688 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0138 1006 ProSitePatterns Protein kinases ATP-binding region signature. 694 717 IPR017441 GO:0005524
Tpr5g0138 1006 SUPERFAMILY L domain-like 26 283 - -
Tpr5g0138 1006 SUPERFAMILY RNI-like 287 594 - -
Tpr5g0138 1006 SUPERFAMILY Protein kinase-like (PK-like) 679 970 IPR011009 -
Tpr5g0138 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 822 834 IPR008271 GO:0004672|GO:0006468
Tpr5g0138 1006 Gene3D Ribonuclease Inhibitor 26 202 IPR032675 -
Tpr5g0138 1006 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 7 998 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0138 Tpr-Chr5 2104534 2108293 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0138 29 996 Receptor kinase-like Gene Family AT5G25930 50.972 0.0 957
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr5g0138 Pkinase 4.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0138 - - gmx:100785907 1401.34