Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0137 ATGGCTTGCACTATCATACAAACCAACTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTATGATGACATTGAAATTGAAGTATGACGTTTTTGTTAGCTTTAGAGGTCAAGACACACGCAACAATTTCGCCGATCATCTTTTTGCTGCCTTTCGAAGAAAAGGCATTTTAGCATTCAGAGATGACACTAAGATTCAGAAAGGGGAATCCATAGCACCTGAACTCCTTTGTGCAATTGAAGCCTCTCAGATTTTCATTGTGATCTTCTCAAAACACTATGCTTCTTCAACATGGTGCTTGCGAGAATTGGAATCTATCCTTCATTGTAGTCAAGTTTCTGGAAGATGTGTTCTTCCTGTTTTCTATGATGTTGATCCTTCTGATGTGAGACATCAAAAAGGAAGTTATGCTGAAGACCTTGCCAAACACGAGGAAAGATTTCAACATGACTCAGATTTGGTGCAAAGATGGAGGGAAGCTTTAACACAAGTCGCCAATTACTCTGGTTGGGATATGCGTCATAAGGCTCAAAATGCAGAGATTGAAAAGATTGCTGAAGAGATAATGAATATATTATTGGGTCACAAATTTTCATATCTTCCAAAAGATTTAATTGGGATAAATTTACCTATTGAGAAAGTAGTAAATCTATTACTTTTAGACTCACTTGATGATGTTCGGGTTGTAGGAATTTGTGGGATGGGTGGAGTAGGGAAGACAACTCTTGCTACTGCTTTATTTGGTCAAATCTCTCATCAATTTGATGCTCGTTGTTTTATTGATGATCTAAGCAAAATATATAGACATGATGGTCCAATTGGTGCACAAAAGCAAATCCTACACCAAACTCTTGGTGGGGAACCCTTTCAGATATGCAATCTCTATGACACGGCTAACTTGATACAAAGTAGGCTTCGTCGCCTGCGAGCACTTATAATTCTTGACAATGTTGATAAAGTTGATCAACTCGATAAGTTAGCCGTGAATCGTGAATGGTTAGGTGCAGGGAGTAGAATCATTATAATTTCTAGAGATGAGCATATCTTGAAAGCATATGGAGTGGATGCAGTTTACAAAGTTCCACTCTTGAATGAGACTAACTCCGTTCAATTATTTTGTCGAAAAGCATTCAAACTTGACCATATTTTGAGTAGTTATGAAGGGTTGGTTAATGGCATACTACATTATGCCGATGGCTTACCATTAGCAATTAAAATATTGGGTTCATTTTTGTTTGGTCGAGATATATCTGAATGGAAAAGTGCATTGTCTAGATTGAGAGAAAGTCCAAACAAAGATGTCATGGATGTGTTACGATTAAGTTTTGATGGGTTGGAGGAATTGGAAAAAGAAATATTTCTTGATATTGCTTGTTTTTTCAATGGGTGCCAGGAGAGTTATGTCAAAAAAGTTCTAAATTGCTGTGGATTTCATGCTGATATTGGTTTAAGAGTTCTAATTGATAAATCACTTCTAAGCATTTCAAATGGAGATCGAATTATAATGCATAGTTTGTTAGAAGAGTTGGGCAAAAACATTGTCCAAGAAATTTCAACCAAAGAATCAAGAAAGTGGACGAGGGTGTGGCTCTACGAACAACTCCAAAATGTTATGTTAGAGAATGTGGAATGGACGGTTGAAGCCATATCATTAGGTATATATTTTGAGGACAAACAAAAACCGATCATGGTTGAAACATTATCAAAAATGAGTCATCTTAGATTGCTCATATTCGGGGACATTATTTTTAAAGGAAACCTTAGCTACCTCTCTAATGAGTTAAGATATGTGGAGTGGTTTTGGTATCCTTTTGAGTATTTGCCGCCATGTTTTCATCCCAATCAACTTGTTGAATTGACCTTGAGGCATAGCTGCCTCAAACAACTATGGAAAGATAAGAAGTATTTGCCCAATTTGAGAAGGTTGGATCTAACTTACTCAAAAAATCTAAGAAAGATGCCAGATTTTGGGGATATTCCAAACCTTGAGGAGCTAGATCTTACAGGTTGTATAAAGCTTGTGGAAATTGATCCATCTATCGGGGTTCTAAAAAAGCTTTATTACTTAAGTTTGAAAGATTGCAAAAATCTAGTAAACATACCAAACAACATATTTGGTCTCACCTCTCTTCAATATCTAAATCTTTCGGGGTGTCCCAAAATGAATAAGAATCCAATTCCAAGGCAATCAAGAACTTCCTTCTGGAAACGGACCACAATTGGTTTACGTTCCTTTTACGGTTATCATGAAGGTTTAGCTAGTTCTTTGGTGCCTTCTTTTCTTAGCTTATATTGTTTGAGTAAAGTTGATATCAGTTTCTGTGGTCTAAGTCAACTCCCAAGTGCAATTGGATGTCTACGTCAGCTAAAAAGATTAAATATAGGGGGGAACAATTTTGTGACACTACCTAGCCTGAAGGAGCTTTCCAACCTTGAATATTTAAACTTACAGCATTGCATGCTTTTGGAATCTTTGCCTCTGCTTCCTTTACCTACTTTTTTTGATCATATGACAAAACATAAGACCACTTTCAAGCATATGAAAAATTATAATTATAAGAGGAAAATAGGACTGGTCATTTTCAATTGTCCTAAGTTGGGTGAGAGTGAATATTGTGATAACATTGCATTTTCATGGATGACACAATTCATTTGGGCAAGACAGCAGTCGTCTAGTGCCTTCTTTTATGGGAATTTAATTGATATTGTTATTCCTAGAAGTGAAATACCAATTTGGTTCAAAAATCAGAGCGAGAGTGGTTCAATAAGAATGGAACTATCTACCATTATGAACAATAATTGCATTGGCATTGCTTGTTGTGTGGTATTTTCTGTTGAACCTTCTGATCGAACTGTCGAAGCTTCTGATAGTAATTCGGGTATATTTTATGAATTTCATAATAATAGTAATAGATTGTGTTGGTCTGATGGTATTGGTGTAATTTTAGAAAGAGGTCTTATTCTGGTCAAATCAAATCACATGTACCTATTCTATATTCCTAAGAGATCATTCTTTGATATTATGAAGTCGATTGACCAACCTCTAACCGATCTTGATTATATCATTTTCAAAGCTGGCATTTATAATGACAAAGGTAGTGATTTGGAGGTGCAGCATTGTGGGTATCGTTTGGTATATGAACATGATCTACAAGACTTGAACTTAACAATGATGCATCCCGAAAATCTGTCAACTCATAAGGGCGAGTTTTTGGCAATTGAAGATGAGGCACAACCATGA 3240 0.3617 MACTIIQTNSSSSSSSSSSSMMTLKLKYDVFVSFRGQDTRNNFADHLFAAFRRKGILAFRDDTKIQKGESIAPELLCAIEASQIFIVIFSKHYASSTWCLRELESILHCSQVSGRCVLPVFYDVDPSDVRHQKGSYAEDLAKHEERFQHDSDLVQRWREALTQVANYSGWDMRHKAQNAEIEKIAEEIMNILLGHKFSYLPKDLIGINLPIEKVVNLLLLDSLDDVRVVGICGMGGVGKTTLATALFGQISHQFDARCFIDDLSKIYRHDGPIGAQKQILHQTLGGEPFQICNLYDTANLIQSRLRRLRALIILDNVDKVDQLDKLAVNREWLGAGSRIIIISRDEHILKAYGVDAVYKVPLLNETNSVQLFCRKAFKLDHILSSYEGLVNGILHYADGLPLAIKILGSFLFGRDISEWKSALSRLRESPNKDVMDVLRLSFDGLEELEKEIFLDIACFFNGCQESYVKKVLNCCGFHADIGLRVLIDKSLLSISNGDRIIMHSLLEELGKNIVQEISTKESRKWTRVWLYEQLQNVMLENVEWTVEAISLGIYFEDKQKPIMVETLSKMSHLRLLIFGDIIFKGNLSYLSNELRYVEWFWYPFEYLPPCFHPNQLVELTLRHSCLKQLWKDKKYLPNLRRLDLTYSKNLRKMPDFGDIPNLEELDLTGCIKLVEIDPSIGVLKKLYYLSLKDCKNLVNIPNNIFGLTSLQYLNLSGCPKMNKNPIPRQSRTSFWKRTTIGLRSFYGYHEGLASSLVPSFLSLYCLSKVDISFCGLSQLPSAIGCLRQLKRLNIGGNNFVTLPSLKELSNLEYLNLQHCMLLESLPLLPLPTFFDHMTKHKTTFKHMKNYNYKRKIGLVIFNCPKLGESEYCDNIAFSWMTQFIWARQQSSSAFFYGNLIDIVIPRSEIPIWFKNQSESGSIRMELSTIMNNNCIGIACCVVFSVEPSDRTVEASDSNSGIFYEFHNNSNRLCWSDGIGVILERGLILVKSNHMYLFYIPKRSFFDIMKSIDQPLTDLDYIIFKAGIYNDKGSDLEVQHCGYRLVYEHDLQDLNLTMMHPENLSTHKGEFLAIEDEAQP* 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0137 1079 PRINTS Disease resistance protein signature 228 243 - -
Tpr5g0137 1079 PRINTS Disease resistance protein signature 304 318 - -
Tpr5g0137 1079 PRINTS Disease resistance protein signature 397 411 - -
Tpr5g0137 1079 PRINTS Disease resistance protein signature 634 650 - -
Tpr5g0137 1079 SUPERFAMILY L domain-like 565 830 - -
Tpr5g0137 1079 Pfam Leucine Rich Repeat 615 634 IPR011713 -
Tpr5g0137 1079 ProSiteProfiles TIR domain profile. 26 192 IPR000157 GO:0007165
Tpr5g0137 1079 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 647 707 IPR044974 GO:0006952
Tpr5g0137 1079 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 639 IPR044974 GO:0006952
Tpr5g0137 1079 Gene3D - 362 446 IPR042197 -
Tpr5g0137 1079 Gene3D Ribonuclease Inhibitor 558 735 IPR032675 -
Tpr5g0137 1079 Gene3D Ribonuclease Inhibitor 740 876 IPR032675 -
Tpr5g0137 1079 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 170 IPR035897 -
Tpr5g0137 1079 SMART AAA_5 225 364 IPR003593 -
Tpr5g0137 1079 Gene3D - 22 189 IPR035897 -
Tpr5g0137 1079 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 22 639 - -
Tpr5g0137 1079 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 647 707 - -
Tpr5g0137 1079 Pfam C-JID domain 905 1050 IPR045344 -
Tpr5g0137 1079 SMART till_3 27 167 IPR000157 GO:0007165
Tpr5g0137 1079 ProSiteProfiles Leucine-rich repeat profile. 788 809 IPR001611 GO:0005515
Tpr5g0137 1079 Pfam TIR domain 27 188 IPR000157 GO:0007165
Tpr5g0137 1079 Gene3D - 190 357 IPR027417 -
Tpr5g0137 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 456 IPR027417 -
Tpr5g0137 1079 Pfam NB-ARC domain 211 432 IPR002182 GO:0043531
Tpr5g0137 1079 SUPERFAMILY "Winged helix" DNA-binding domain 433 536 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0137 Tpr-Chr5 2095564 2100493 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0137 28 826 WRKY Transcription Factor Family AT4G12020 30.000 3.61e-90 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0137 - - mtr:MTR_4g080070 1205.66