Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0136 ATGGCTTGCACTATCATACAAACCAACTCTTCTTCTTCTTCTTCTTCTATGATGACATTGAAATTGAAGTATGACGTTTTTGTTAGCTTTAGAGGTCAAGACACACGCAACAATTTCGCGGATCATCTTTTTGCTGCCTTTCAAAGAAAAGGGATTTTTGCATTCAGAGATGACACTAAGATTCAGAAAGGGGAATCCATAGCACCTGAACTCCTTCGTGCAATTGAAGCCTCTCAGATTTTCATTGTGATCTTCTCAAAACACTATGCTTCTTCAACATGGTGCTTGCGAGAATTGGAATCTATCCTTCATTGTAGTCAAGTTTCTGGAAGACGTGTTCTTCCTGTTTTCTATGATGTTGATCCTTCTGATGTGAGACATCAAAAAGGAAGTTATGCTGAAGACCTTGCCAAACATGAGGAAAGATTTCAACATGACTCAGATTTGGTGCAAAGATGGAGGGAAGCTTTAACACAAGTCGCCAATTACTCTGGTTGGGATATGCGTCATAAGGCTCAAAATGCAGAGATTGAAAAGATTGCTGAAGAGATAATGAATATATTATTGGGTCACAAATTTTCATATCTTCCAAAAGATTTAATTGGGATAAATTTACCTATTGAGAAAGTAGTAAATCTATTACTTTTAGACTCACTTGATGATGTTCGGGTTGTAGGAATTTGTGGGATGGGTGGAGTAGGGAAGACAACTCTTGCTACTGCTTTATTTGGTCAAATCTCTCATCAATTTGATGCTCGTTGTTATATTGATGATCTAAGCAAAATATATAGACATGATGGTCCAATTGGTGCACAAAAGCAAATCCTACACCAAACTCTTGGTGGGGAACCCTTTCAGATATGCAATCTCTATGACACGGCTAACTTGATGCAAAGTAGGCTTCGTCGCCTGCGAGCACTTATAATTCTTGACAATGTTGATAAAGTTGAACAACTCGATAAATTAGCCGTGAATCGTGAATGGTTAGGTGCAGGGAGTAGAATCGTTATAATTTCTAGAGATGAGCATATCTTGAAAGAGTATGGAGTGGATGTAGTTTACAAAGTTCCACTCTTGAATAAGACTAACTCCCTTCAATTATTTTCTCGAAAAGCATTCAAACTTGACCATATTTTGAGTAGTTATGAAGGGTTGGTTAATGGCATACTACATTATGCCGATGGCTTACCATTAGCAATTAAAATATTGGGTTCATTTTTGTTTGGTCGAGATATATCTGAATGGAAAAGTGCATTGTCTAGATTGAGAGAAAGTCCAAACAAAGATGTCATGGATGTGTTACGATTAAGTTTTGATGGGTTGGAGGAATTGGAAAAAGAAATATTTCTTGATATTGCTTGTTTTTTCAATCGGCGCCCGGAGGATTATGTCAAAAAAGTTCTAAATTGCTGTGGATTTAATGCTGATATTGGTTTAAGAGTTCTAATTGATAAATCACTTCTAAGCATATCTGACGATCAAATTATAATAATGCATAGTTTGTTAGAAGAGTTGGGCAAAAACATGGTCCAAGAAATGTCAACCAAAGAATCAAGAAAGTGGACGAGGGCGTGGCTCCCCAAACAACTCCAAAATGTTATGTTAGAGAATGTGGAAAGGAAGGTTGAAGCCATAAATTTTCATAGAAATTCAACGGACCAAGAAACAGACAAATTTATCATGGGTGAAACATTGTCAAAAATGAGTCATCTTAGATTGCTCAGATTGAGGAACATATCTATTTTAGGAAACCTCAGCTACCTCTCTAATGAGTTAAGATATGTGGAGTGGAATAGGTATCCTTTCAAGTATTTGCCGCCATGTTTTCATCCCAATCAACTTGTTGAATTGAACTTGACGGATAGCAGCATCAAACAACTATGGAAAGATAAGAAGTATTTGCCCAATTTGAGAAGGTTGGATCTAACTTACTCAAAAAATCTAAGAAAGATGCCAGATTTTGGGGATATTCCAAACCTTGAGGAGCTAGATCTTACAGGTTGTATAAAGCTTGTGGAAATAGATCCATCTATCGGGGTTCTAAAAAAGCTTTATTACTTAAGTTTGGAAGATTGCAAAAATCTAGTAAACATACCAAACAACATATTTGGTCTCACCTCTCTTCAATATCTAAATCTTTCGGGGTGTCCCAAAATGAATAAGAATCCAATTCCAAGGCAATCAAGAACTTCCTTCTGGAAACGGACCACAATTGGTTTACGTTCCTTTTACGGTTATCATGAAGGTTTAGCTAGTTCTTTGGTGCTTTCTTTTCTTAGCTTATATTGTTTGAGTGAAGTTGATATCAGTTTCTGTGGTCTAAGCCAACTCCCAAGTGCAATTGGATGTCTACGTCAACTCGTAAGATTAAATATAAGCGGGAACAATTTTGTGACACTACCTAACCTGAAGGAGCTCTGCAACCTTGGATATTTAAACTTAGAGCATTGCAAGCTTTTGGAATCTTTGCCTCAGCTTCCTTTGCCTACTTTTTTTGATATTACGACAAAACGTAAAACCACTTTGAATTATATGAAAAACTATCGTGAGAGGAAAGTTGGACTGGTCATTTTCAATTGTCCTAAGTTGGGTGAGAGTGAATATTGTGATAACATTGCATTTTCATGGATGACACAATGCATTTGGGCAAGACAGCAGTCCTCTAGTGCCGTCTTTTATGGGAATTTAATTGATATTGTTATTCCTAGAAGTGAAATACCAATTTGGTTCAAAAATCAGAGCGAGAGTGGTTCAATAAGAATGGAACTATCTACCATTATGAACAATAATTGCATTGGCATTGCTTGTTGTGTGGTATTTTCTGTTGAACCTTCTGATCGAACTGTCAAAGCTTCTGATAAACCATATTCGAGTATATTTTATGGATTTCTTAAAAATAGTAATATATCGTTTTTGTCTGCTGGTATTGGTGTAAATTTAGAAAGAGGTCTTATTGTGGTCAAATCAAATCACATGTACCTATTCTATATTCCTAAGAGATCATTCTTTGATATTATGAAGTCGATTGACCATCTTGATGATATCATTTTCAAAGTTGGCATTTATAATGACGAAGGTAGTGATTTGAAGGTGCAGCATTGTGGGTATCGTTTGGTATATGAACATGATCTACAAGACTTGAACTTAACAATGATGCATCCCGAAAATCTGTCAACTCATAAGGGCAAGTTTTTGGCAATTGAAGATGAGGCACAACCATGA 3222 0.3641 MACTIIQTNSSSSSSSMMTLKLKYDVFVSFRGQDTRNNFADHLFAAFQRKGIFAFRDDTKIQKGESIAPELLRAIEASQIFIVIFSKHYASSTWCLRELESILHCSQVSGRRVLPVFYDVDPSDVRHQKGSYAEDLAKHEERFQHDSDLVQRWREALTQVANYSGWDMRHKAQNAEIEKIAEEIMNILLGHKFSYLPKDLIGINLPIEKVVNLLLLDSLDDVRVVGICGMGGVGKTTLATALFGQISHQFDARCYIDDLSKIYRHDGPIGAQKQILHQTLGGEPFQICNLYDTANLMQSRLRRLRALIILDNVDKVEQLDKLAVNREWLGAGSRIVIISRDEHILKEYGVDVVYKVPLLNKTNSLQLFSRKAFKLDHILSSYEGLVNGILHYADGLPLAIKILGSFLFGRDISEWKSALSRLRESPNKDVMDVLRLSFDGLEELEKEIFLDIACFFNRRPEDYVKKVLNCCGFNADIGLRVLIDKSLLSISDDQIIIMHSLLEELGKNMVQEMSTKESRKWTRAWLPKQLQNVMLENVERKVEAINFHRNSTDQETDKFIMGETLSKMSHLRLLRLRNISILGNLSYLSNELRYVEWNRYPFKYLPPCFHPNQLVELNLTDSSIKQLWKDKKYLPNLRRLDLTYSKNLRKMPDFGDIPNLEELDLTGCIKLVEIDPSIGVLKKLYYLSLEDCKNLVNIPNNIFGLTSLQYLNLSGCPKMNKNPIPRQSRTSFWKRTTIGLRSFYGYHEGLASSLVLSFLSLYCLSEVDISFCGLSQLPSAIGCLRQLVRLNISGNNFVTLPNLKELCNLGYLNLEHCKLLESLPQLPLPTFFDITTKRKTTLNYMKNYRERKVGLVIFNCPKLGESEYCDNIAFSWMTQCIWARQQSSSAVFYGNLIDIVIPRSEIPIWFKNQSESGSIRMELSTIMNNNCIGIACCVVFSVEPSDRTVKASDKPYSSIFYGFLKNSNISFLSAGIGVNLERGLIVVKSNHMYLFYIPKRSFFDIMKSIDHLDDIIFKVGIYNDEGSDLKVQHCGYRLVYEHDLQDLNLTMMHPENLSTHKGKFLAIEDEAQP* 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0136 1073 Gene3D Ribonuclease Inhibitor 499 735 IPR032675 -
Tpr5g0136 1073 Gene3D Ribonuclease Inhibitor 736 875 IPR032675 -
Tpr5g0136 1073 SUPERFAMILY L domain-like 560 843 - -
Tpr5g0136 1073 Pfam C-JID domain 902 1044 IPR045344 -
Tpr5g0136 1073 Pfam TIR domain 23 184 IPR000157 GO:0007165
Tpr5g0136 1073 Gene3D - 186 353 IPR027417 -
Tpr5g0136 1073 SUPERFAMILY "Winged helix" DNA-binding domain 429 530 IPR036390 -
Tpr5g0136 1073 ProSiteProfiles TIR domain profile. 22 188 IPR000157 GO:0007165
Tpr5g0136 1073 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 452 IPR027417 -
Tpr5g0136 1073 SMART till_3 23 163 IPR000157 GO:0007165
Tpr5g0136 1073 ProSiteProfiles Leucine-rich repeat profile. 786 807 IPR001611 GO:0005515
Tpr5g0136 1073 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 166 IPR035897 -
Tpr5g0136 1073 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 676 727 IPR044974 GO:0006952
Tpr5g0136 1073 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 645 692 IPR044974 GO:0006952
Tpr5g0136 1073 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 636 IPR044974 GO:0006952
Tpr5g0136 1073 Gene3D - 358 442 IPR042197 -
Tpr5g0136 1073 Pfam NB-ARC domain 207 428 IPR002182 GO:0043531
Tpr5g0136 1073 PRINTS Disease resistance protein signature 224 239 - -
Tpr5g0136 1073 PRINTS Disease resistance protein signature 300 314 - -
Tpr5g0136 1073 PRINTS Disease resistance protein signature 393 407 - -
Tpr5g0136 1073 PRINTS Disease resistance protein signature 632 648 - -
Tpr5g0136 1073 Gene3D - 19 185 IPR035897 -
Tpr5g0136 1073 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 18 636 - -
Tpr5g0136 1073 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 676 727 - -
Tpr5g0136 1073 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 645 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0136 Tpr-Chr5 2058903 2063795 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0136 24 794 WRKY Transcription Factor Family AT4G12020 30.341 6.22e-89 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0136 - - mtr:MTR_4g080070 1167.53