Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0134 ATGAAAACATCAACAATACTTTCATTTCACTATCTTCTAACAATTTTTCTCATCATTCTAAACCATACAAATTCTCAATCTCATCAAAATCTTCATGATCAAGAACATGAAATCTTAATGAAAATAAAACAACACCTTGAAAATCCACCAAACCTTAGTCATTGGACAAAAACAAACACCTCTCATTGTTCTTGGCTAGAAATCAGTTGCACCAAAGGTTCTGTCACAGGGTTGACTTTATTCAACTACAACATAAATGAAACAATACCCTCTTTCATATGTGACCTTAAAAATCTCACACATGTTGATTTCAACAACAATTACATTCCTGGGATGTTTCCAACATATCTATACAATTGTTCAAAATTGGAATATCTTGATTTGTCAATGAACAATTTTGTTGGAAATATTCCTAATGATATTTTCAAATTATCTAATTTGAATTATCTTAATCTTAGTTACACTAATTTCACTGATGATATTCCTTCTAGTATTGGAAGATTGAAGAATTTGAGATATCTTGCACTTCAAGTTTGTCTTTTTAATGGAACTTTCCCTGATGAGATTGGAAACTTGTTGAATCTTGAAACATTGGATTTGTCGTCGAATAATTTGTTTAAGAGTTCTAAGTTGCCATTGAATTGGACCAAGTTGAGGAAATTGAAGGTTTTTTATATGTATGACTGCAACCTGTTTGGTGAAATGCCTGAACCAATGGGAAATATGGTTTCTTTGGAGGATTTAGATATTTCACAAAATAGTTTAACTGGGAAAATTCCTAGTGGTTTGTTCATGCTGAAGAATCTCAGTAGATTGTTACTTTGGGAAAATAGTCTATCTGGAGAGATACCAAGTGTGGTTGAAGCATTAAATTTGACAATCATTGATCTTGCAGAGAATAATCTTACTGGAAAAATACCAGATGATTTTGGAAAGCTTCAAAAGTTAACAGGTTTGTCTTTGGCTGCGAATAATTTGTCAGGAGAGATACCACAAAGCATAGGTCGTCTTCCGTCTCTGATTGATTTCAAAATCCTCATGAACAACTTGTCAGGTACACTTCCTCCTGATTTTGGACTTTACTCAAAGCTACAAACTTTCCATATTGCATCAAACAGTTTTAGAGGGAAGCTACCAGAGAATTTGTGCTATCATGGAGAGTTACTTAATTTAACTGTTTATGAAAATCATTTAAGTGGTGAGTTACCAGAATCACTTGGAAATTGTAGTAGCTTGTTGGAGGTAAAAATTTACAATAATGAGTTTTATGGTAAAATTCCTGATGGTCTTTGGAGAGCTGAAAATTTGTTGTTTTTCATGATAAGCCATAATAAGTTTATTGGTGAGCTTCCTCAAAAATTGGCATCAGGTATTTCAATTTTTGATATAAGTTACAATCAGTTTTATGGTGGAATTCCAAGTGGAGTATCGTCATGGACTAATGTGGTTGAGTTTATAGCAAGCAAGAATTATCTTAATGGAAGTATTCCTCAAGAGTTAACAAATCTTTCAAAACTACAAAAATTGTTGCTTGATCAGAATCAGCTAAAAGGGTTACTTCCATTTGATGCAATATCATGGAATTCATTAGTGACACTAAATTTGAGCCAAAATCAACTCAATGGACAAATTCCCGTTTCAATTGGTCATTTAAAGTCACTTAATGTTCTTGATCTATCGGAAAATCAATTCTCTGGCGAAATACCTTCTATACTTCCTAGAATCACAGATCTCAATCTATCATCCAACCATTTGACAGGTAGAGTTCCTAGTGAATTTGAAAATTCAGCTTATGATAGAAGCTTTTTGAACAATTCTGGTTTATGTGCTGATACACCAGAATTGAACCTTACCTTATGCAATTCTAATTCCAATCATCAAAGTCAAAGCAAAGATTCATCTTTATCTCCAATTTTGATTGTAATCTTGGTGATAGTTTCCATCTTAGTGGCTTCTGTGATATTATTCTTGATTATCAAACTTTACAGTAAAAGAAAACAAGGATTTGATAACTCATGGAAACTCACTTCATTTCAAAGACTAAATTTCACAGAATCCGACATAGTATCATCAATGACAGAACATAATATTATTGGAAGTGGTGGATATGGAACTGTTTATAGAGTTGATATTGATGGATTAGGATATGTAGCTGTGAAAAAGATTTGGGAAAACCGAAAACTAGACAATAATCTTGAGAAATCATTTCACACTGAGGTTAAAATATTGAGTAGCATTCGACATCGAAACATTGTGAAGTTGTTGTGTTGTATATCTAATGATGATACAATGTTACTTGTTTACGAGTATGTCGAAAACCGGAGTCTTGATAGATGGTTGCAGAAGAAGACTGTTAAGTCTTCTTCAACTTTGTTGTCAAGTTCAATTCATCATGCTGTTCTTGATTGGCCAAAGAGATTGCAAATAGCTATTGGTGTAGCTCAAGGTTTGAGCTACATGCATCATGAATGTTCACCACCTGTTGTTCATCGAGATGTGAAGACAAGTAACATTCTTTTGGATGCTCAGTTTAATGCAAAAGTTGCTGATTTTGGTTTGGCTAGGATGTTGATCAATCCAGAGGAACTTGCTACCATGTCAGCTGTGATTGGTTCTTTTGGCTATATGGCTCCAGAATATGTTCAAACAACAAAAGTTAGTGAAAAGATTGATGTCTACAGCTATGGTGTTATCCTATTGGAACTGACAACTGGTAAAGAAGCTAACTATGGTGATGAGTATTCATCTCTTGCAGAGTGGTCTTGGCGCCACATTCGAGCAGGAAGCAATATAGAAGAGTTGCTTGACAAAGAAGTAATGGAACCAATTCACTTAGATGGAATGTGCAAAGTTTTCAAACTTGGTGTGATGTGTACTTCAACACTTCCATCAAGTAGACCTTCCATGAAAGAGGTTTTGGAAGTATTGATCAATTGTGGTGATTTGTTTGGTTATGGAGAGAGGAATATTGGACATAATATTGATGCTGTTCCACTTCTTAGGAATTCTAAAAGAGAGAGTAAATTGGATATTGATAATAATAACTAG 3048 0.3386 MKTSTILSFHYLLTIFLIILNHTNSQSHQNLHDQEHEILMKIKQHLENPPNLSHWTKTNTSHCSWLEISCTKGSVTGLTLFNYNINETIPSFICDLKNLTHVDFNNNYIPGMFPTYLYNCSKLEYLDLSMNNFVGNIPNDIFKLSNLNYLNLSYTNFTDDIPSSIGRLKNLRYLALQVCLFNGTFPDEIGNLLNLETLDLSSNNLFKSSKLPLNWTKLRKLKVFYMYDCNLFGEMPEPMGNMVSLEDLDISQNSLTGKIPSGLFMLKNLSRLLLWENSLSGEIPSVVEALNLTIIDLAENNLTGKIPDDFGKLQKLTGLSLAANNLSGEIPQSIGRLPSLIDFKILMNNLSGTLPPDFGLYSKLQTFHIASNSFRGKLPENLCYHGELLNLTVYENHLSGELPESLGNCSSLLEVKIYNNEFYGKIPDGLWRAENLLFFMISHNKFIGELPQKLASGISIFDISYNQFYGGIPSGVSSWTNVVEFIASKNYLNGSIPQELTNLSKLQKLLLDQNQLKGLLPFDAISWNSLVTLNLSQNQLNGQIPVSIGHLKSLNVLDLSENQFSGEIPSILPRITDLNLSSNHLTGRVPSEFENSAYDRSFLNNSGLCADTPELNLTLCNSNSNHQSQSKDSSLSPILIVILVIVSILVASVILFLIIKLYSKRKQGFDNSWKLTSFQRLNFTESDIVSSMTEHNIIGSGGYGTVYRVDIDGLGYVAVKKIWENRKLDNNLEKSFHTEVKILSSIRHRNIVKLLCCISNDDTMLLVYEYVENRSLDRWLQKKTVKSSSTLLSSSIHHAVLDWPKRLQIAIGVAQGLSYMHHECSPPVVHRDVKTSNILLDAQFNAKVADFGLARMLINPEELATMSAVIGSFGYMAPEYVQTTKVSEKIDVYSYGVILLELTTGKEANYGDEYSSLAEWSWRHIRAGSNIEELLDKEVMEPIHLDGMCKVFKLGVMCTSTLPSSRPSMKEVLEVLINCGDLFGYGERNIGHNIDAVPLLRNSKRESKLDIDNNN* 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0134 1015 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Tpr5g0134 1015 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 10 1008 - -
Tpr5g0134 1015 SUPERFAMILY L domain-like 39 375 - -
Tpr5g0134 1015 ProSitePatterns Protein kinases ATP-binding region signature. 698 721 IPR017441 GO:0005524
Tpr5g0134 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 828 840 IPR008271 GO:0004672|GO:0006468
Tpr5g0134 1015 Gene3D Ribonuclease Inhibitor 208 475 IPR032675 -
Tpr5g0134 1015 Gene3D Ribonuclease Inhibitor 32 207 IPR032675 -
Tpr5g0134 1015 CDD STKc_IRAK 698 976 - -
Tpr5g0134 1015 Gene3D Ribonuclease Inhibitor 476 617 IPR032675 -
Tpr5g0134 1015 SMART serkin_6 692 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0134 1015 Gene3D Phosphorylase Kinase; domain 1 671 770 - -
Tpr5g0134 1015 Gene3D Transferase(Phosphotransferase) domain 1 771 982 - -
Tpr5g0134 1015 ProSiteProfiles Protein kinase domain profile. 692 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0134 1015 SMART LRR_typ_2 572 595 IPR003591 -
Tpr5g0134 1015 SMART LRR_typ_2 192 218 IPR003591 -
Tpr5g0134 1015 SMART LRR_typ_2 96 120 IPR003591 -
Tpr5g0134 1015 SMART LRR_typ_2 313 337 IPR003591 -
Tpr5g0134 1015 SMART LRR_typ_2 144 168 IPR003591 -
Tpr5g0134 1015 SMART LRR_typ_2 242 266 IPR003591 -
Tpr5g0134 1015 SMART LRR_typ_2 503 528 IPR003591 -
Tpr5g0134 1015 SUPERFAMILY Protein kinase-like (PK-like) 686 976 IPR011009 -
Tpr5g0134 1015 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 10 1008 - -
Tpr5g0134 1015 SUPERFAMILY RNI-like 292 594 - -
Tpr5g0134 1015 ProSiteProfiles Leucine-rich repeat profile. 194 215 IPR001611 GO:0005515
Tpr5g0134 1015 Pfam Protein kinase domain 694 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0134 Tpr-Chr5 2045310 2049677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0134 35 980 Receptor kinase-like Gene Family AT5G25930 50.522 0.0 930
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr5g0134 Pkinase 4.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0134 - - cam:101515509 1619.36