Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0125 ATGGACTCTAAAAAAGAGGAAGGGGTGAGAAAAGTAAAAGAGGGAGGTTCAATAGGCATAATTTTGAGATATAGTGATTGGATTGATGTTGTTTTAATGTTGATGGGTGCTTTGGGAGCAATTGGAGATGGAATGTCAACAAATGTTTTGCTTCTCTTTGCTAGCCGTATTATGAACAGCTTAGGTGGAAGTAATAATAACAATAGTGAGACTTCCATGTCTGAGGTTGAAAAATGCAGCTTATATTTTGTCTACTTGGGATTGGCAGCAATGGTGGTGGCTTTCATGGAAGGGTATTGTTGGAGCAAAACAAGTGAGAGGCAGGTATTGAGAATTCGCTACAAGTATTTGGAAGCTGTTCTTAGACAAGAAGTTGGGTTTTTTGATTCACAAGAAACAAATACTTCTGAAATCATTAATAGCATATCAAAGGACACTAATCTTATACAAGAAGTTCTAAGTGAAAAGGTGCCTTTATTTTTGATGCAATCATCATCATTCATCTCAGGGATTTGTTTTGCTACATACTTCTCATGGAGATTAGCATTAGTAGCATTTCCAACTCTTGTTTTACTCATAATCCCTGGCATGATATATGGAAAATACCTAATCTATTTATCAAAATCATCAATGAAAGAGTATGGAAAAGCAAATGCAATTGTTCAACAAGCATTAAGCTCAATAAAAACGGTTTATTCATTCACTGCTGAGAAGAGAATAATGGAAAAATATTCAGAAATATTAGATAAAACTTCAAAGCTTGGAATTAAACAAGGTATAGCTAAAGGTTTAGCTGTTGGAAGCACTGGTTTGTCTTTTGCAATTTGGGCTTTTCTTGCTTGGTATGGAAGTCATTTGGTTATGTATAAAGGTGAAAGTGGTGGAAGAATCTATGCTGCTGGAATTTGCTTCATAATGAGTGGATTATCCTTGGGAGTAGTACTTCCAGATTTGAAATACTTCACAGAAGTATCAATTGCTGCATCAAGAATATTTGCTATGATTGATAGAACACCAGAAATTGATAGTGAAGACACAACAAAAGGAATTATATTAGAAACCATAAGTGGCAAATTAAACTTTGAGCATGTAAAATTCACATACCCTTCTAGACAAGAAAGTGTTGTACTATATGATTTTAATCTTCAAATTGAAGCTGGAAAAACTGTTGCATTAGTTGGTGCAAGTGGAAGTGGTAAATCAACAGCAATAGCATTAGTACAAAGATTTTATGATGCAAATGAAGGTGTTGTTAAGGTTGATGGTTTTGATATAAAAAGTTTACAATTGAAATGGATTAGAGGGAAAATGGGACTTGTGAGTCAAGAACATGCTATGTTTGGTACATCTATTAAGGAAAATATTATGTTTGGTAAAAATGATGCTACTATGGATGAAATTGTTGCTGCTGCTACTGCTGCTAATGCTCATAATTTCATTAGGCAACTTCCTGATGGATATGAAACCAAGGTTGTTGCTCACAAGCTATCAACAATCAGAAATGCAGACCTCATAGCAGTTATGAGTAATGGTTGCATCATTGAAACTGGCACACACAATGAACTAATCAACATTCCAAATGGTCACTATGCAAAATTAGCAAAATTACAAACACAATTAAGCATTAATGATGACCAAGATCAAAATCAAGAACAACAAAACATTCTTCTTTCTGCTGCAAGAAGTAGTGCAGGTAGAACAAGCACTGCTAGATCAAGCCCTGCCGTAATGTTTCCGAAATCACCATTACCTAATGATATAATCACTTCTCAAGTTTCTCATCCATCACCTTCATTTTCAAGGCTACTTGTTCTGAATTCTCCTGAATGGAAACAAGGACTAATCGGAACACTCTCAGCTATTGCATTTGGTTCAATTCAACCGATTTATGCATTAACAATCGGTGGCATGATTTCAGCTTTTTTCGCTACAAGTCATCAAGAAATGAAACACAGGATCATGAACTATTCGTTGATTTTCACTTCTCTATCGCTCGCTTCTATTATACTCAATCTCTTGCAACACTACAATTTTGCTTATATGGGAGCAAAGTTAACAAAAAGGATAAGATTGTGTATGTTGGAGAAAATCTTAACCTTCGAAACCGCTTGGTTTGATGAGGAAAAGAATTCTAGTGGTGCATTGTGTTCGAGGTTGAGTAACGAAGCATCGATGGTGAAGTCACTCGTTGCTGATAGAGTCTGTTTACTTGTTCAAACCACTTCGGCTGTGACAATCGCGATGATCATAGGTCTTGTAGTAGCTTGGAAGCTAGCTCTTGTTATGATAGCGGTCCAACCACTTACAATACTTTGTTTTTATACGCGAAAGGTTTTGCTTTCTACGCTTTCAACTAAATTCGTTAAGGCGCAGAACCAAAGCACACAGATTGCTGTCGAGGCTGTTTATAATCACAGAATTGTGACCTCGTTTGGAAGCATCGAAAAAGTTCTCAGACTGTTTGACAAGGCGCAAGAGGCACCGAGGATGGAAGCTAGGAAGAAATCTTGGCTAGCTGGTATTGGTATGGGATCTGCTCAGTGTTTAACTTTTATGTGCTGGGCTTTGGATTTTTGGTATGGTGGTAGATTGGTGGAAAAGAGAGAAATTTCTTCGGGCGATGTGTTTAAAACATTTTTTGTGTTGGTTAGTACCGGAAAAGTTATCGCTGAAGCTGGTAGCATGACTTCTGATCTAGCTAAAAGCTCAACAGCAGTTGCATCAGTGTTTGAAATTCTTGATAGACAATCACTTATTCCCAAGGATGGAGAAGAAACCAATGGAATTATGTTGGAAAAGCTAAGTGGAAAAATAGAACTAAAGAATGTTGATTTTTCTTATCCAAGTAGAGCAAAGACACCTATTTTGAACAAATTTTGCTTGGAAGTAAAGCCAGGAAAAAGTGTTGGACTAGTTGGAAAAAGTGGATGTGGAAAATCAACAGTGATTGCATTAATACAAAGATTCTATGATGTTGAAAGAGGATCAGTGAAAATTGATAATGTGGATTTAAGAGAATTAGATATTCATTGGTATAGACAACAAACTGCATTAGTAAGTCAAGAACCTGTTATATATTCTGGTAGCATCAGGGATAACATTTTGTTTGGAAAACAAGATGCAAATGAAAATGAAATTGTTGAAGCTGCTAGGTCTGCAAATGCTCATGATTTCATATCATCATTGAAAGATGGATATGAAACTGAATGTGGAGAAAGAGGAGTTCAATTATCAGGAGGACAAAAACAAAGAATAGCAATTGCAAGAGCCATAATCAGAAATCCAATAATACTTCTACTAGATGAAGCAACAAGTGCTTTGGATGTTCAATCAGAACAAGTTGTTCAAGAAGCACTTGATAGGATTATGGTTGGAAGAACTACTATTGTTGTGGCACATAGACTTAACACAATCAAAGAACTTGACTCAATTGCTTATGTCTTAGAGGGTAAGGTTGTGGAACAAGGAAGCTATTCTCAGCTTAAGCACAAGAGAGGTGCTTTTTTCAATCTTGCCAACCATCAAATCCAAACTTAG 3537 0.3622 MDSKKEEGVRKVKEGGSIGIILRYSDWIDVVLMLMGALGAIGDGMSTNVLLLFASRIMNSLGGSNNNNSETSMSEVEKCSLYFVYLGLAAMVVAFMEGYCWSKTSERQVLRIRYKYLEAVLRQEVGFFDSQETNTSEIINSISKDTNLIQEVLSEKVPLFLMQSSSFISGICFATYFSWRLALVAFPTLVLLIIPGMIYGKYLIYLSKSSMKEYGKANAIVQQALSSIKTVYSFTAEKRIMEKYSEILDKTSKLGIKQGIAKGLAVGSTGLSFAIWAFLAWYGSHLVMYKGESGGRIYAAGICFIMSGLSLGVVLPDLKYFTEVSIAASRIFAMIDRTPEIDSEDTTKGIILETISGKLNFEHVKFTYPSRQESVVLYDFNLQIEAGKTVALVGASGSGKSTAIALVQRFYDANEGVVKVDGFDIKSLQLKWIRGKMGLVSQEHAMFGTSIKENIMFGKNDATMDEIVAAATAANAHNFIRQLPDGYETKVVAHKLSTIRNADLIAVMSNGCIIETGTHNELINIPNGHYAKLAKLQTQLSINDDQDQNQEQQNILLSAARSSAGRTSTARSSPAVMFPKSPLPNDIITSQVSHPSPSFSRLLVLNSPEWKQGLIGTLSAIAFGSIQPIYALTIGGMISAFFATSHQEMKHRIMNYSLIFTSLSLASIILNLLQHYNFAYMGAKLTKRIRLCMLEKILTFETAWFDEEKNSSGALCSRLSNEASMVKSLVADRVCLLVQTTSAVTIAMIIGLVVAWKLALVMIAVQPLTILCFYTRKVLLSTLSTKFVKAQNQSTQIAVEAVYNHRIVTSFGSIEKVLRLFDKAQEAPRMEARKKSWLAGIGMGSAQCLTFMCWALDFWYGGRLVEKREISSGDVFKTFFVLVSTGKVIAEAGSMTSDLAKSSTAVASVFEILDRQSLIPKDGEETNGIMLEKLSGKIELKNVDFSYPSRAKTPILNKFCLEVKPGKSVGLVGKSGCGKSTVIALIQRFYDVERGSVKIDNVDLRELDIHWYRQQTALVSQEPVIYSGSIRDNILFGKQDANENEIVEAARSANAHDFISSLKDGYETECGERGVQLSGGQKQRIAIARAIIRNPIILLLDEATSALDVQSEQVVQEALDRIMVGRTTIVVAHRLNTIKELDSIAYVLEGKVVEQGSYSQLKHKRGAFFNLANHQIQT* 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0125 1178 CDD ABC_MTABC3_MDL1_MDL2 938 1175 - -
Tpr5g0125 1178 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 359 583 IPR003439 GO:0005524
Tpr5g0125 1178 PANTHER ABC TRANSPORTER B FAMILY MEMBER 8-RELATED 22 491 - -
Tpr5g0125 1178 PANTHER ABC TRANSPORTER B FAMILY MEMBER 8-RELATED 489 1175 - -
Tpr5g0125 1178 ProSitePatterns ABC transporters family signature. 1077 1091 IPR017871 GO:0005524
Tpr5g0125 1178 CDD ABC_6TM_Pgp_ABCB1_D2_like 603 919 - -
Tpr5g0125 1178 CDD ABC_6TM_Pgp_ABCB1_D1_like 33 331 - -
Tpr5g0125 1178 Gene3D - 491 538 IPR027417 -
Tpr5g0125 1178 Gene3D - 349 490 IPR027417 -
Tpr5g0125 1178 SUPERFAMILY ABC transporter transmembrane region 21 342 IPR036640 GO:0005524|GO:0016021
Tpr5g0125 1178 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 927 1175 IPR027417 -
Tpr5g0125 1178 Pfam ABC transporter 957 1105 IPR003439 GO:0005524
Tpr5g0125 1178 Pfam ABC transporter 379 480 IPR003439 GO:0005524
Tpr5g0125 1178 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 22 491 IPR039421 -
Tpr5g0125 1178 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 489 1175 IPR039421 -
Tpr5g0125 1178 SMART AAA_5 965 1154 IPR003593 -
Tpr5g0125 1178 SMART AAA_5 386 633 IPR003593 -
Tpr5g0125 1178 Pfam ABC transporter transmembrane region 34 290 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr5g0125 1178 Pfam ABC transporter transmembrane region 615 884 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr5g0125 1178 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 938 1174 IPR003439 GO:0005524
Tpr5g0125 1178 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 350 537 IPR027417 -
Tpr5g0125 1178 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 34 323 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr5g0125 1178 SUPERFAMILY ABC transporter transmembrane region 601 915 IPR036640 GO:0005524|GO:0016021
Tpr5g0125 1178 Gene3D ABC transporter type 1, transmembrane domain 583 923 IPR036640 GO:0005524|GO:0016021
Tpr5g0125 1178 Gene3D ABC transporter type 1, transmembrane domain 539 553 IPR036640 GO:0005524|GO:0016021
Tpr5g0125 1178 Gene3D ABC transporter type 1, transmembrane domain 21 348 IPR036640 GO:0005524|GO:0016021
Tpr5g0125 1178 Gene3D - 928 1178 IPR027417 -
Tpr5g0125 1178 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 614 901 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0125 Tpr-Chr5 1908472 1920125 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0125 21 491 Calmodulin-binding Proteins AT2G36910 41.525 3.80e-107 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0125 K05658 - jre:108991404 1661.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0125 5 1908472 1920125 Tpr5g0125 5 1908472 1920125 ECH