Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0112 ATGGTTGATGCTAATACTTCATCCTTTTCATCTTCACCTTCATCATCATCACCACCACAATCATTGACATGTTCTAGTGAAGAAGAAAAAAAAGGAAAAAAAAGAGAAAGAGAAAACAACAACAATAACACTAAGCATCCAGTTTATAGAGGAGTTAGAATGCGAAGTTGGGGAAAATGGGTATCCGAAATCCGAGAACCTCGGAAAAAAAACCGAATCTGGCTTGGAACATTCGCAACAGCCGAAATGGCAGCGCGTGCACATGACGCAGCTGCACTAACAATTAAAGGAACATCAGCAATCCTTAACTTCCCCGAACTATCAGCTTCACTTCCTCGACCAGTTTCCAGCTCACCAAGAGATGTTCAAGCAGCCGCGGCTAAAGCCGCTTCCATGGTTGCTCCTCCACAGTCACCAGCACCATCGTCTTCGTCTTCATCTTCGTCTTCGTCTTCGTCTTCGTCTTCATCTTCATCGACGCCTGAAGATCTCGGGGAGATTGTTGAGTTGCCAACACTTGGACCCGACCCAGATAGTGAGTTTGTGTTTTTTGACCCGATTGATTATTCTCATTTGTGGTATCAAAGCATTTATGATGATAATGAAGACAATAGTTACTTGAATATGATATCAATGCATGACCCAGAAAACACGCTACTTTCATTGTGGTCTTGA 675 0.4296 MVDANTSSFSSSPSSSSPPQSLTCSSEEEKKGKKRERENNNNNTKHPVYRGVRMRSWGKWVSEIREPRKKNRIWLGTFATAEMAARAHDAAALTIKGTSAILNFPELSASLPRPVSSSPRDVQAAAAKAASMVAPPQSPAPSSSSSSSSSSSSSSSSSSTPEDLGEIVELPTLGPDPDSEFVFFDPIDYSHLWYQSIYDDNEDNSYLNMISMHDPENTLLSLWS* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0112 224 MobiDBLite consensus disorder prediction 1 25 - -
Tpr5g0112 224 MobiDBLite consensus disorder prediction 26 43 - -
Tpr5g0112 224 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Tpr5g0112 224 PRINTS Ethylene responsive element binding protein signature 71 87 IPR001471 GO:0003700|GO:0006355
Tpr5g0112 224 CDD AP2 49 107 IPR001471 GO:0003700|GO:0006355
Tpr5g0112 224 MobiDBLite consensus disorder prediction 111 164 - -
Tpr5g0112 224 MobiDBLite consensus disorder prediction 136 163 - -
Tpr5g0112 224 Gene3D AP2/ERF domain 48 106 IPR036955 GO:0003700|GO:0006355
Tpr5g0112 224 Pfam AP2 domain 47 97 IPR001471 GO:0003700|GO:0006355
Tpr5g0112 224 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 8 201 - -
Tpr5g0112 224 MobiDBLite consensus disorder prediction 1 49 - -
Tpr5g0112 224 ProSiteProfiles AP2/ERF domain profile. 48 105 IPR001471 GO:0003700|GO:0006355
Tpr5g0112 224 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 8 201 - -
Tpr5g0112 224 SMART rav1_2 48 111 IPR001471 GO:0003700|GO:0006355
Tpr5g0112 224 SUPERFAMILY DNA-binding domain 48 105 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0112 Tpr-Chr5 1683348 1684591 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0112 13 204 AP2-EREBP Transcription Factor Family AT5G11590 56.459 3.45e-59 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Tpr5g0112 AP2 4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0112 K09286 - gmx:100804801 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0112 5 1683348 1684591 Tpr5g0112 5 1683348 1684591 ECH