Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0104 ATGGCAGATCTTAAAGAGCGACTGCTCCCGCTGAAACCTGCATCAGCTATTAACTTAAGAGAGTCCGTCGTCAACCGACCAACTGCCTCTGGAAGGCATGCTTTTCAAGGAGTCGATGTTGTCGAGGTCAAGAAGCGTGGCCAAGGTCTTAAATCCTGGATTCGTGTTGACACATCTGGAAATTCTCAGGTCATTGAGGTAGACAAGTTTACTATGATGCGTCGTTGTGATCTTCCTGCCCGTGATCTTCGCCTACTTGATCCTGTCTTTGTCTATCCATCAACAATCCTTGGTAGGGAGAAGGCTATTGTTGTAAATCTGGAGCAGATACGCTGCATTATTACAGCAGATGAGGTCCTTCTGTTGAATTCCCTTGATAAATATGTATTGCAATATGTGATTGATCTTCAACGAAGGTTGACAACAACTGGGGGAGGCGAGGTGGGTGATGTAGGCGAGGTCTGGCAATCAGACCATTCTGAAATGAACCAAAGGAGAGGCAGTAGGAATTTTGAAAATTTATACAGCAACACTTCCCCTGATTACTTACCTTTTGAATTCAGGGCTCTTGAAGTTGCCCTCGAGGCGGCGTGCACATTTCTTGACACCCAGGCAGCAGAGTTAGAAATTGAGGCTTATCCGTTGCTGGATGAACTGACATCAAAGATTAGTACTCTAAATTTGGAACGCGTACGTCGGTTGAAAAGCAGACTTGTTGCCCTGACTAGGAGGGTTCAGAAGGTTAGAGACGAAATAGAGCAGCTTATGGATGATGACGGTGATATGGCTGAAATGTACCTTACGGAGAAGAAAAGACGGATGGAATTATCATTTTATGGAGATCAGTCTATGCTTGGATATAGATCAGTTGACGGTGCATCTATCTCTGCTCCAGTCACTCCTGTTTCATCACCACCTGATTCTAGAAGGCTTGAGAAGAGCTTGAGCATGGCTAGGAGTCGACATGAGAGCATGAGGAGTAGCGAAAGTAATACAGAAAATATAGAAGAGCTTGAGATGTTGTTAGAAGCATACTTTGTTGTCATTGACAGCACTCTAAACAAGTTGACATCGTTAAAAGAATACATAGATGACACGGAAGATTTCATCAACATTCAACTGGATAATGTGCGGAATCAGCTTATCCAGTTTGAGCTTTTGCTCACAACTGCAACATTTGTGGTTGCAATATTTGGAGTGGTGGCAGGAGTATTTGGGATGAACTTTGAAATTCCATTCTTTGATGTCCCATCTGCATTCCAGTGGGTCCTTATAATAACAGGAGTTTGTGGAGTGTGTATATTTTCTGCATTTGTATGGTTCTTCAAGTACAGAAGACTCATGCCCCTATAA 1353 0.4331 MADLKERLLPLKPASAINLRESVVNRPTASGRHAFQGVDVVEVKKRGQGLKSWIRVDTSGNSQVIEVDKFTMMRRCDLPARDLRLLDPVFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDKYVLQYVIDLQRRLTTTGGGEVGDVGEVWQSDHSEMNQRRGSRNFENLYSNTSPDYLPFEFRALEVALEAACTFLDTQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMELSFYGDQSMLGYRSVDGASISAPVTPVSSPPDSRRLEKSLSMARSRHESMRSSESNTENIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGVFGMNFEIPFFDVPSAFQWVLIITGVCGVCIFSAFVWFFKYRRLMPL* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0104 450 Gene3D Magnesium transport protein CorA, transmembrane region 388 448 - -
Tpr5g0104 450 Gene3D Magnesium transport protein CorA, transmembrane region 125 381 - -
Tpr5g0104 450 MobiDBLite consensus disorder prediction 312 330 - -
Tpr5g0104 450 Coils Coil 231 258 - -
Tpr5g0104 450 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 387 440 IPR045863 -
Tpr5g0104 450 Pfam CorA-like Mg2+ transporter protein 325 442 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Tpr5g0104 450 PANTHER MAGNESIUM TRANSPORTER MRS2-10 3 450 - -
Tpr5g0104 450 CDD Mrs2_Mfm1p-like 53 447 IPR039204 -
Tpr5g0104 450 Gene3D - 38 124 - -
Tpr5g0104 450 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 3 450 IPR039204 -
Tpr5g0104 450 MobiDBLite consensus disorder prediction 298 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0104 Tpr-Chr5 1601117 1605478 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0104 1 450 MRS2 Gene Family AT1G16010 83.333 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0104 K16075 - gmx:100779803 743.806