Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0100 ATGGGTTGCATTTATTCAAGAGTTTGCATAGGTGAAACTTGTAAAGGTTCAAGCATCAATGGTGACCCAATTTCAAGAAATGAACTTCAACATGTTTTTTCACCATCTTCTTCAGGTGAAATTAGAGACCAATTGAATCAATTAAGCTTAACAAGAGATTCAGAAGCTGGTATTAGAAGATTAGCTAGGGTTTCCTCTCAGTTTTTGCCACCAGATGGTTCAAGAATTGTGAGAATTCCTTCAAGTAATTATGAATTACGTTATTCTTATCTTTCTCAACGTGGTTATTATCCTGATGCTCTTGATAAAGCAAATCAAGATAGTTTTTGTATTCATACACCTTTTGGAAATGATGTTAATGATCAATTTTTCGGTGTTTTCGATGGTCATGGTGAATTTGGTGCCGAATGTTCGCAATTTGTTAAGCGTAGGCTTTGTGAGAATTTATTAAGGAATTCTAAATTTAGTGTTGATCCTGTTGAGGCTTGTCATTCGGCTTTTTTAGCGACGAATTCACAGTTACATGGTGATATTTTAGATGATAGTATGAGTGGAACAACAGCTATAACGATTTTGGTTAGAGGGAAGACGGTTTATGTAGCGAATTGTGGTGATTCGAGAGCTGTTATAGCGGAGAAGAAAGGGAAAGATGGTGATGTTGTTGCAGTTGATTTGTCTATTGATCAGACACCTTATAGAGTTGATGAGTTAGAAAGAGTGAAACTTTGTGGTGCTAGAGTTCTTACTTTGGATCAAATTGAAGGGTTAAAGAATCCTGATGTTCCGTGTTGGGGTACCGATGAAGAAGCTGATGATGGTGATCCTCCTAGGTTATGGATTCCAAATGGGATGTATCCCGGTACTGCTTTTACAAGGAGTATCGGTGATTCTATTGCCGAAACGATCGGTGTTGTTGCTAATCCTGAGATTGTTAGTTTTGAACTCACACCTAATCATCCATTTTTCGTTATTGCTAGTGATGGTGTTTTCGAGTTTCTTTCTAGCCAAACTGTTGTTGATATGGTCGCAAAGTTCAAAGATCCACGTGATGCTTGTGCTGCGATAGTGGCAGAATCTTATCGACTTTGGCTACAGTATGAGACTCGTACAGACGATATTACAGTCATCATTGTGCATATAAATGGGCTAAATGAAACCCCTGTTGCTCACTCAACAAGTTCTCGTGATGTTTTACGAACCTCTGTCCCTCAAGTTATTGAGGTGACAGGTTCAGAATCTCCTTCCACTTTTGGCTGGACCGCTAGGAATAATCGCGTAAGGCAAGAGTTGTCAAGGGCACGCATCCGAGCAATTGAAAATTCCCTCGAGAATGGACAAGGTTGGGTTCCTCCATCATCGGCACACAGAAAAACATGGGAGGAAGAAGCACACATAGAGAAGGCTTTGAATGATCATTTCCTCTTCCGTAAACTTACCGAATCTCAATGTCACGTTTTATTGGATTGCATGCAAAGAGTTGAAATCGAACCTGGGGATATTATAGTCAAACAGGGTGGTGAAAGTGACTGTTTTTATGTCGTTGGAAGCGGAGAATTTGAAGTCCTGGCGACTCAGGAAGAAAAAGACGGGGAGGTACCTAGGGTTTTGCAGCGCTACACAGCCGAAAAACTATCGTGCTTTGGAGAACTTGCTCTGATGTACAACAAACCACTCCAGGCTTCTGTACGTGCCGTAACAAAAGGAACTCTTTGGGCTTTAAAGCGAGAAGATTTTCGAGGGATTTTAATGTCAGAATTCTCTAACTTATCATCGTTAAAGTTACTTCGGTCTGTAGATCTCCTCTCAAGATTGTCAATTCTACAACTGAGTCAGATTTCCGACTGCCTTTCTGAAGTTACCTTCTCAAGCGGACAGACAATAATCGATAAAAATGAAGTCCTTGCATTGTACATTATCCAAAAGGGACGTGTAAAATTAACTTTCGATGCTGATTTATTGACAAGTCCAAATACCTTAAGCCTCAAGTCTGACATCGAAAATGAGGACGATGATGTACCAAGCGAAACAGAACTGTCGATAGAGAAGCCCGAGGGAAGCTATTTTGGTGAATGGTCCCTTCTTGATGAACAAATTGGTTCCTTAACTGCTGTTGCAGAGGAAGATGTTGTATGTGCTTTACTAACAAAGGACAAATTTGAATCAGTTATTGGCTCCTTACAAAAGATTTCTCAGGAAGATCACAAGTTGAGGGACAATTCCAAGGAATTGACTAGAAACTTTGAATTCTCATCCCTTGATAAAGTGCAGCTCTCGGATTTGGAGTGGAGAAAGACTATATATTCCACTGATTGTTCTGATACTGGACTAGCAAATTTAAGAGACTCAGAAAATGTGCTTACTTTGAAGAAATTTTCCAAGCCAAAAGTGAAAAAGCTAGGAAAGGAATCACAAGTCTTGAAAGAGAAGGATTTGATTAAGGGTTTGAGCTCTTCAGCTTGTGTACCACAAGTTTTATGCACCTTTGCCGACCGCATGTATGCTGGAATACTGCTAAATACTCGTCTTGTCTGCCCTTTATCTTCCATACTTTCAAGTCCTTTTAGCGAATCAGCGGCACAGTTTTGCGCTGCTTCTGTTGTTACCGCATTAGAAGACTTGCACAAGAATGGTGTTCTCTATAGAGGTGTCTCGCGCGATGTTTTGATGTTGGATCAAACAGGACGGATACAGCTGGTGGATTTCAGATTTGGAAAGAAGCTATCCGATGAGAGAACATACACAATTTGTGGGATGGCAGATTCTCTAGCTCCAGAGATTGTTTTGGGAAAAGGCCACGGTTTCCCTGCCGACTGGTGGGCGTTGGGAGTTTTAGTATATTTTATGTTACAAGGCGATATGCCATTTGGATCATGGAGAGAAAACGAACTTGATACAGTTGCCAAAATTGCAAAAAGGAAATTAAATTTTCCAGACACTTTTAGCCCTGAAGCTATTGATCTCATCTCCAAGTTACTTGATGTGGAAGAAAATACTAGACTTGGTAGCCAAGGTCCTGATTTTGTCAAGAGTCACTCATGGTTTAATGGTATCAATTGGGAAGCGCTTAGACACCACACTTTTCCAGTTCCTCCAGAAATTATTTCTCGCATAACACAATACTTGGAAGTTCGTTATGAGGATTCTTCTGCTTCTACGGAGTCCCCATTAGAGGAGGTAGAAGAACTTAATGTGCCTGAATGGCTTGAAGATTGGTAG 3216 0.4039 MGCIYSRVCIGETCKGSSINGDPISRNELQHVFSPSSSGEIRDQLNQLSLTRDSEAGIRRLARVSSQFLPPDGSRIVRIPSSNYELRYSYLSQRGYYPDALDKANQDSFCIHTPFGNDVNDQFFGVFDGHGEFGAECSQFVKRRLCENLLRNSKFSVDPVEACHSAFLATNSQLHGDILDDSMSGTTAITILVRGKTVYVANCGDSRAVIAEKKGKDGDVVAVDLSIDQTPYRVDELERVKLCGARVLTLDQIEGLKNPDVPCWGTDEEADDGDPPRLWIPNGMYPGTAFTRSIGDSIAETIGVVANPEIVSFELTPNHPFFVIASDGVFEFLSSQTVVDMVAKFKDPRDACAAIVAESYRLWLQYETRTDDITVIIVHINGLNETPVAHSTSSRDVLRTSVPQVIEVTGSESPSTFGWTARNNRVRQELSRARIRAIENSLENGQGWVPPSSAHRKTWEEEAHIEKALNDHFLFRKLTESQCHVLLDCMQRVEIEPGDIIVKQGGESDCFYVVGSGEFEVLATQEEKDGEVPRVLQRYTAEKLSCFGELALMYNKPLQASVRAVTKGTLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLSILQLSQISDCLSEVTFSSGQTIIDKNEVLALYIIQKGRVKLTFDADLLTSPNTLSLKSDIENEDDDVPSETELSIEKPEGSYFGEWSLLDEQIGSLTAVAEEDVVCALLTKDKFESVIGSLQKISQEDHKLRDNSKELTRNFEFSSLDKVQLSDLEWRKTIYSTDCSDTGLANLRDSENVLTLKKFSKPKVKKLGKESQVLKEKDLIKGLSSSACVPQVLCTFADRMYAGILLNTRLVCPLSSILSSPFSESAAQFCAASVVTALEDLHKNGVLYRGVSRDVLMLDQTGRIQLVDFRFGKKLSDERTYTICGMADSLAPEIVLGKGHGFPADWWALGVLVYFMLQGDMPFGSWRENELDTVAKIAKRKLNFPDTFSPEAIDLISKLLDVEENTRLGSQGPDFVKSHSWFNGINWEALRHHTFPVPPEIISRITQYLEVRYEDSSASTESPLEEVEELNVPEWLEDW* 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0100 1071 Gene3D Phosphorylase Kinase; domain 1 758 844 - -
Tpr5g0100 1071 Pfam Protein phosphatase 2C 115 359 IPR001932 -
Tpr5g0100 1071 ProSiteProfiles PPM-type phosphatase domain profile. 87 380 IPR001932 -
Tpr5g0100 1071 Gene3D Jelly Rolls 449 588 IPR014710 -
Tpr5g0100 1071 ProSiteProfiles Protein kinase domain profile. 760 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0100 1071 Pfam Cyclic nucleotide-binding domain 619 723 IPR000595 -
Tpr5g0100 1071 Pfam Cyclic nucleotide-binding domain 493 584 IPR000595 -
Tpr5g0100 1071 SUPERFAMILY cAMP-binding domain-like 443 584 IPR018490 -
Tpr5g0100 1071 SUPERFAMILY Protein kinase-like (PK-like) 751 1042 IPR011009 -
Tpr5g0100 1071 SMART serkin_6 760 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0100 1071 ProSiteProfiles cAMP/cGMP binding motif profile. 600 724 IPR000595 -
Tpr5g0100 1071 Gene3D Transferase(Phosphotransferase) domain 1 845 1031 - -
Tpr5g0100 1071 CDD CAP_ED 474 583 IPR000595 -
Tpr5g0100 1071 CDD CAP_ED 600 724 IPR000595 -
Tpr5g0100 1071 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
Tpr5g0100 1071 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 36 1071 - -
Tpr5g0100 1071 SMART cnmp_10 600 738 IPR000595 -
Tpr5g0100 1071 SMART cnmp_10 474 597 IPR000595 -
Tpr5g0100 1071 SMART PP2C_4 79 378 IPR001932 -
Tpr5g0100 1071 PRINTS cAMP-dependent protein kinase signature 495 509 - -
Tpr5g0100 1071 PRINTS cAMP-dependent protein kinase signature 510 524 - -
Tpr5g0100 1071 PRINTS cAMP-dependent protein kinase signature 545 554 - -
Tpr5g0100 1071 PRINTS cAMP-dependent protein kinase signature 719 731 - -
Tpr5g0100 1071 Pfam Protein kinase domain 780 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0100 1071 SUPERFAMILY PP2C-like 73 383 IPR036457 -
Tpr5g0100 1071 CDD PP2Cc 103 380 IPR001932 -
Tpr5g0100 1071 Gene3D - 78 381 IPR036457 -
Tpr5g0100 1071 SUPERFAMILY cAMP-binding domain-like 592 734 IPR018490 -
Tpr5g0100 1071 Gene3D Jelly Rolls 589 744 IPR014710 -
Tpr5g0100 1071 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 36 1071 - -
Tpr5g0100 1071 ProSiteProfiles cAMP/cGMP binding motif profile. 474 583 IPR000595 -
Tpr5g0100 1071 Coils Coil 726 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0100 Tpr-Chr5 1530653 1538810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0100 1 1071 PP2C-type Phosphatase Gene Family AT2G20050 66.455 0.0 1466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Tpr5g0100 PP2C 2.8e-34 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0100 - - gmx:100799821 1805.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0100 5 1530653 1538810 Tpr5g0100 5 1530653 1538810 ECH