Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0096 ATGGATCGCATCATCGGTGACAAGTTCAAATTAGGTCGTAAGATCGGAAGTGGATCCTTCGGTGAAATCTACCTCGCTACTCATATTGATACTTTCGAGATCGTTGCTGTTAAGATCGAGACTGGTAAAACGAAGCATCCACAATTGCTTTATGAAGCTAAGCTCTATAATATTCTACAAGGAGGAATGTTTGATGCAGGTGGCATCCCAAGCATAAGATGGAGTGGTGTAGATGGGGAAGACAATGTGCTTGTTATGGATTTGTTGGGGCCTAGTCTTGAGGATCTTTTTGTATACTGTGGAAGAAAGTTCTCACTCAAAACTGTCTTGATGTTGGCTGATCAAATGATGACCAGAATAGAGTATGTGCATTCTAAAGGATTCCTACATAGGGATATAAAACCGGATAACTTTCTCATGGGACTTGGTCGGAAGGCAAACCTGGTCTATGTAATTGATTTTGGGCTTGCAAAACGTTATCGGGACTCCACAACCAATCGCCACATCCCCTACAGGGAGAACAAAAACTTAACAGGGACTGCACGATATGCAAGCTGCAATACTCATCTTGGGATTGAGCAAAGCCGGCGGGATGATTTGGAGTCGTTGGGGTATGTGCTTTTGTACTTCCTCAGAGGAAGCCTTCCTTGGCAAAACCTAAAGGCTGCGACGAAGAAGCAAAAATATGATAAAATATGTGAAAAGAAAGTATCAACTCCTATTGAGGTTTTATGCAAATCTCACCCTGTAGAGTTTGCTTCATACTTTCATTACTGTCATTCTTTGACCTTTGATCAGCGACCTGATTATGGATTCTTGAGGCGCTTATTTCGAGAGTTATTTGCTCGAGAAGGTTACAAATTTGATTATGTATTTGATTGGACAATTTTGAAGTACCAACAGTCACAAAAGAGTAGAGCCCAGCCTCACATATCCCCGATTCCTGTAGCGACCAACAATCGGGCAATGGCCATGGATATTGATAACCAACAAGGGGATGTCTCAGCAGAGCAAATTAAATCAGACAATGCCACTACTTCTGGTGTTAAGTTTCAATTTAAATCATCTGCGGGTAAAAATTTGGCTTCTGAAAATCCTCTTGGCAAGAATATTTTTGGTGAAACAACTATCCCTTCTACCTCATACTCTTTCGAAGCATCAAGAAGGAACTCCTTGAAGCCTGCCCCGTCCACTGAAGCAGTGAACCATAGACATGGCCAAGGGAGCAGTAAAATTGGTCCTTCAAGTAGTCGGATGAATGTTCTGCACATAAGTTCTGCTAAATGA 1287 0.4188 MDRIIGDKFKLGRKIGSGSFGEIYLATHIDTFEIVAVKIETGKTKHPQLLYEAKLYNILQGGMFDAGGIPSIRWSGVDGEDNVLVMDLLGPSLEDLFVYCGRKFSLKTVLMLADQMMTRIEYVHSKGFLHRDIKPDNFLMGLGRKANLVYVIDFGLAKRYRDSTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQNLKAATKKQKYDKICEKKVSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLRRLFRELFAREGYKFDYVFDWTILKYQQSQKSRAQPHISPIPVATNNRAMAMDIDNQQGDVSAEQIKSDNATTSGVKFQFKSSAGKNLASENPLGKNIFGETTIPSTSYSFEASRRNSLKPAPSTEAVNHRHGQGSSKIGPSSSRMNVLHISSAK* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0096 428 Gene3D Transferase(Phosphotransferase) domain 1 1 348 - -
Tpr5g0096 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Tpr5g0096 428 PANTHER CASEIN KINASE 1-LIKE PROTEIN 3-RELATED 1 412 - -
Tpr5g0096 428 ProSiteProfiles Protein kinase domain profile. 9 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0096 428 SMART serkin_6 9 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0096 428 PANTHER CASEIN KINASE-RELATED 1 412 - -
Tpr5g0096 428 SUPERFAMILY Protein kinase-like (PK-like) 4 294 IPR011009 -
Tpr5g0096 428 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Tpr5g0096 428 Pfam Protein kinase domain 10 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0096 428 MobiDBLite consensus disorder prediction 384 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0096 Tpr-Chr5 1494275 1498692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0096 5 217 EF-hand Containing Proteins AT2G41860 28.372 4.85e-13 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Tpr5g0096 Pkinase 3.8e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0096 K08960 - gmx:100805890 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0096 5 1494275 1498692 Tpr5g0096 5 1494275 1498692 ECH
Tpr3g0418 3 4416857 4420578 Tpr5g0096 5 1494275 1498692 PCT