Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0094 ATGACAATATTAGCCACATCTCATATCAAATTTTCACTTTACTTTCACATAGCCATTTTTCTAATTTTGAGCCATGCAAATTTTCAATCTCAACAAGAACATTTAATCTTATTAAAATTCAAGTTTCACCTACAAAATCCATCTTTTCTTAGTCATTGGAACTCATCAAACACCTCTTATTGTTCTTGGCCAAAAATCACATGCACCAAAGGTTCTATCACAGGGTTGACTTTGGTCAACTCCAACATAACTCAAACTATACCTTCTTTCATATGTGACCTTAAAAACCTCACACATGTTGATTTCAGCAAGAATTTCATTCCTGGTGAGTTTCCAAAATCTCTATTTAAATGTTCCAAGCTTGAGTATCTTGATTTATCAATGAATAACTTTGTTGGCAAGATTCCTTATGAAATTCAAAGTTTGGTTAATTTGCAATATCTCAACCTTGGTTCAACCTATTTTAGTGGTGAAATTCCTTCTAGTATTGGAAATCTTAAGGATTTAAGATTCCTTTATCTTCAATATTGTTCATTTAATGCTACTTTTCCGGCCGAAATTGGTAACTTGTTCAACCTTGAATTATTGGATATGTCCTCTAATTATATGCTACCTCCTTTGAAGCTTCCATTGAGCATAACCAAGTTGAAAAAATTGAAAGTTTTTTACATGTTTGGTTCAAATTTAGTAGGGGAAATTCCTGAGACTATTGGTGAAATGGTTGCATTGGAAAATTTGGATTTATCAAAAAATAATTTAAGTGGAAAAATTCCTAGTGGTTTGTTCATGCTAAAGAATTTGAGCATAGTGCACCTTTATAGAAATAGTCTCTTTGGAGAGATACCAAGTGTGGTTGAAGCATTGAATTTGGTTGAACTTGATGTAGCAGAGAATAATCTTACAGGAAAAATACCAAATGATTTTGGAAAGTTGATAAAGTTAACATGGTTGAATTTGTTCATGAACAAGTTTTTAGGAGAGATTCCACAAAGCATAGGGCACCTTCCATCTTTAAAAGGTTTTAGTATCTTTAAGAACAAGTTTTCAGGTACAATTCCTTCTGATTTTGGACTTTACTCAAAGCTTGAAATTTTTCATTTAGCAATGAACAATTTTAAGGGAAGGTTACCTGAGAATTTGTGTTATCATGGTAAGTTACAAAACCTAAGTGTTTATGAAAATCATTTAAGTGGTGAATTACCAAAGTCACTTGGAAATTGTAGTAGTTTGGTTGAGGTGAAAATTTACAAGAATGAGTTTTATGGTAAAATTCCTAGTGGTCTTTTTTGGAGTAAAAATTTGGTGTTTTTCATGATAAGCCATAATAAGTTTATTGGTGAGATTCCACAACATTTGTCTTCAAATGTTTCACTTTTTGATATAAGTTACAATAAGTTTTATGGTAGAATTCCAATTGGAGTATCTTCTTGGACTAATGTGATTGAGTTTAAGGCTAGTAAGAACTTTCTTAATGGAACTTTTCCTCAAGAGCTAACAAATCTTCCTAAGCTTGACACATTGTTGCTTGATCAAAATCAGCTTAAAGGGTCACTTCCAAATGATATCATATCATGGAAATCATTAGTGACACTAAATTTGAGCCAAAACCAACTCAAAGGACAAATTCCAATATCAATTGGTCATTTACCTTCACTTAGTGTTCTTGATCTATCAGAAAATCGATTCTCCGGCGAAATACCGTCTATACCTCCTAGAATCACAAATCTCAATCTATCATCCAATTTTTTGACAGGAAGAGTTCCTAGTGAATTTGAAAACTCGGCTTTCGATAGAAGCTTTTTGAACAATTCTGGTTTATGTGCTGATACACCAAAACTTAGCCTTACCCTTTGCAATTTTGGCCTTCAAAAATCAACCAAAAGCTCACAGTGGTCTCTTGGTTTGATTATTAGCTTAATTGTGGTGATTTTCTTGTTGGTTTTGTTTGCATCATTCATGATTATCAAACTTTACAATAAAAGAAAACAAGCATTGGAAAATTCATGGAAGTTCATTTCATTCCAAAGGCTAAGTTTCACAGAATCAAACATAGTTTCTTCATTGACAGAACAAAATATCATTGGAAGTGGTGGATTCGGCACGGTATACCGTGTTCCAGTCGACGGTTTAGCCTATGTTGCTGTGAAAAAAATCACTAGCAACAGAAAGTTAAGGCAAAAGCTCGTAGCTTCCTTTCGTGCAGAAGTTAAAATACTTAGCAATATTCGACATCGAAATATTGTGAAGTTGTTGTGTTGTATCTATAATGAGGATTCAATGATGCTTGTGTATGAGTATTTGGAACACCGCAGCCTAGACAAGTGGCTGCACAACAAGAATGAGTCATCAAATATGTCAGGTTCGGCGCAACATGTTGTCCTTGATTGGCCAAAGCGATTGCGAATAGCCATTGGGATTGCTCATGGTTTGTGCTACATGCACCATGATTGCTCGCCTCCGATTGTTCACCGCGATATAAAAACAAGCAACATTCTTTTGGATTCTCAATTCAATGCAAAAGTTGCTGATTTTGGTCTTGCTAGGATGTTGATAAAGGCAGGACAATCTAACACCATGTCAGCTGTGATTGGATCATTTGGTTATATGGCTCCAGAATATGTTCAAACAACTAAAGTGAATGAAAAGATTGATGTGTTCAGCTTTGGTGTTATCTTATTGGAACTAGCAACTGGTAAAGAAGCTACTTATGGTGATGAATATTCATCACTTGTAGAATGGTCATGGAGGCATGTTCATGAAGGAAGCAATATAGAAGAGCTTCTTGACAAAGATTTTGTGGAACAAAGTTATTTGGATGAAATGTGTTGCATTTTCAAACTTGGAATAATGTGTACTGCTACACTTCCTTCTAGTAGACCTTCCATGAAAGAAGTGTTACATATATTGCTAAGAAGTGAAGGAGGGATTGTGTTTGGAGAGAGGAATGTTATTGTTGGGGAATATGATGATGCTCCTTTTCTTAAAAATTCAAAAAATAGGGATAGTAGGTTAGATTTTGTTGATAGTGATAGTGACTAA 3039 0.3429 MTILATSHIKFSLYFHIAIFLILSHANFQSQQEHLILLKFKFHLQNPSFLSHWNSSNTSYCSWPKITCTKGSITGLTLVNSNITQTIPSFICDLKNLTHVDFSKNFIPGEFPKSLFKCSKLEYLDLSMNNFVGKIPYEIQSLVNLQYLNLGSTYFSGEIPSSIGNLKDLRFLYLQYCSFNATFPAEIGNLFNLELLDMSSNYMLPPLKLPLSITKLKKLKVFYMFGSNLVGEIPETIGEMVALENLDLSKNNLSGKIPSGLFMLKNLSIVHLYRNSLFGEIPSVVEALNLVELDVAENNLTGKIPNDFGKLIKLTWLNLFMNKFLGEIPQSIGHLPSLKGFSIFKNKFSGTIPSDFGLYSKLEIFHLAMNNFKGRLPENLCYHGKLQNLSVYENHLSGELPKSLGNCSSLVEVKIYKNEFYGKIPSGLFWSKNLVFFMISHNKFIGEIPQHLSSNVSLFDISYNKFYGRIPIGVSSWTNVIEFKASKNFLNGTFPQELTNLPKLDTLLLDQNQLKGSLPNDIISWKSLVTLNLSQNQLKGQIPISIGHLPSLSVLDLSENRFSGEIPSIPPRITNLNLSSNFLTGRVPSEFENSAFDRSFLNNSGLCADTPKLSLTLCNFGLQKSTKSSQWSLGLIISLIVVIFLLVLFASFMIIKLYNKRKQALENSWKFISFQRLSFTESNIVSSLTEQNIIGSGGFGTVYRVPVDGLAYVAVKKITSNRKLRQKLVASFRAEVKILSNIRHRNIVKLLCCIYNEDSMMLVYEYLEHRSLDKWLHNKNESSNMSGSAQHVVLDWPKRLRIAIGIAHGLCYMHHDCSPPIVHRDIKTSNILLDSQFNAKVADFGLARMLIKAGQSNTMSAVIGSFGYMAPEYVQTTKVNEKIDVFSFGVILLELATGKEATYGDEYSSLVEWSWRHVHEGSNIEELLDKDFVEQSYLDEMCCIFKLGIMCTATLPSSRPSMKEVLHILLRSEGGIVFGERNVIVGEYDDAPFLKNSKNRDSRLDFVDSDSD* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0094 1012 SMART serkin_6 688 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0094 1012 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 14 1002 - -
Tpr5g0094 1012 Gene3D Ribonuclease Inhibitor 140 206 IPR032675 -
Tpr5g0094 1012 Gene3D Transferase(Phosphotransferase) domain 1 767 975 - -
Tpr5g0094 1012 ProSiteProfiles Protein kinase domain profile. 688 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0094 1012 Gene3D Phosphorylase Kinase; domain 1 664 766 - -
Tpr5g0094 1012 Gene3D Ribonuclease Inhibitor 32 139 IPR032675 -
Tpr5g0094 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 821 833 IPR008271 GO:0004672|GO:0006468
Tpr5g0094 1012 Gene3D Ribonuclease Inhibitor 474 614 IPR032675 -
Tpr5g0094 1012 SMART LRR_typ_2 501 525 IPR003591 -
Tpr5g0094 1012 SMART LRR_typ_2 240 264 IPR003591 -
Tpr5g0094 1012 SMART LRR_typ_2 549 576 IPR003591 -
Tpr5g0094 1012 SMART LRR_typ_2 142 166 IPR003591 -
Tpr5g0094 1012 SMART LRR_typ_2 94 118 IPR003591 -
Tpr5g0094 1012 PRINTS Leucine-rich repeat signature 243 256 - -
Tpr5g0094 1012 PRINTS Leucine-rich repeat signature 549 562 - -
Tpr5g0094 1012 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 14 1002 - -
Tpr5g0094 1012 Pfam Leucine rich repeat N-terminal domain 32 68 IPR013210 -
Tpr5g0094 1012 ProSitePatterns Protein kinases ATP-binding region signature. 694 717 IPR017441 GO:0005524
Tpr5g0094 1012 Pfam Leucine Rich Repeat 289 311 IPR001611 GO:0005515
Tpr5g0094 1012 Pfam Protein kinase domain 690 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0094 1012 SUPERFAMILY RNI-like 76 599 - -
Tpr5g0094 1012 SUPERFAMILY Protein kinase-like (PK-like) 679 969 IPR011009 -
Tpr5g0094 1012 Gene3D Ribonuclease Inhibitor 207 473 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0094 Tpr-Chr5 1462881 1466679 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0094 28 1010 Receptor kinase-like Gene Family AT5G25930 49.499 0.0 929
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr5g0094 Pkinase 3.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0094 - - cam:101515509 1628.61