Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0065 ATGATGAAACCTTTGATCAACTTCAAAACCATACTAATCCTCTTCTTTTTCATCTCCCTCCATAACCACCTTCAAGCCTATGATCCTGGATTTCCACTTGTGGGGACCACCGCCACCCAATATAATATTCCAACCAACATTGCACTCCAAGAGACAGGTGATGATGATGCTAGTAGTGAGCTTGATGCTCTACTAACCTGGAAAGGTAGCCTGGACAAACAAAGCCAACATATGTTGGCTTCATGGCAACCAAATCACCCTCCTTGCGGCGGCAATTGGTCTGGAATTTCATGTAATGAAGCTCAAAGAGTCGAAACTATATATCTTGATAGTTATGGTTTAAGAGGTACACTTCATGATTTCACCTTCTCATCCTTTAAACATCTCACAGAAATCTCCCTTGGTAATAATTCACTGTATGGAACAATTCCCTCTAACATAAGCATGTTATCCAAACTAGTCTACCTTGATTTACAATATAACAATTTCTCTGGATCAATCCCACTTTCCACATGCTTACTAACCAACCTAGAAATTCTTAGCCTCTACCATAACAATATTTCTGGCACTATCCCTAAACAAATCGGCAACAGCCTTGTCAAACTGACTTTTCTCGATTTGAGTCGAAACACCCTAACAGGTGTAGTCCCGGATTCTATTGGGAATTTAACGGAATTAATAACCCTTACACTTTCCTACAATCAACTATTTGGATTTATTCCTTCGTCGATTGGAAACTTGATTAAACTAGAAAAGCTTCAACTATATGGCAATCAACTTAATGGTTCAATTCCTCAAAGTATTGGTAGGCTGACATCTTTGGTTATTCTTGGATTATCAATCAACAATTTGAGTGGTCCGATACCTTCTTCCATCGGCAATTTAGTGAAACTCGAAACCTTATATTTGTATGAAAATGAGTTATCTGGTTCAATTCCTAACACTATTGGTAGGCTAACATCTTTAGTTGATCTTGAAATATCAGTTAACAATTTGAGTGGTCCGATACCTTCTTCCATCGGCAATTTAGTGAAATTACAGATCTTATACCTAAATCAAAATCAATTATCTGGTTCAATACCCTCTTCCTTTGGAAGTTTAGTGGAATTGGAGAAATTACAGTTAGATCTTAATCAATTATCTGGTTCAGTCCCCAAACAATTCAATAACTTGATACATTTTAAACATTTGCAACTTAGTAATAACAATCTTTCTGGTTCTTTACCGGATAACATATGTCTCGGTGGACAACTTACTAACTTTGCTGCAAACCAAAATCAATTTACCGGAAGACTGCCTATGAGCTTGAAAAATTGTACTACTCTCAAAAGAGTTCGCGTTGAAATGAACCAATTATCCGGAGACTTGTCGATAGACCTTGGAGGAATATATCCTCACTTGAATTACATTGATCTAAGTCATAATAACTTTTATGGAACACTACCATCTAAGTGGGGACAATGTAAAAATCTAACAAGCTTGAAGATCTCAAACAACAAAGTTGGTGGGAGATTACCTGAAAATCTTGGAGAAGCTTCTCAAATTCATATGCTTGATCTTGGTTCGAATAAATTGTTAGGGGAAATTCCAATTTCTATTTTCAGAAATATGACTTCTTTATTCAATCTTAACTTAGAAGGCAACATGTTGTCTGGAGTTATTCCGAACGAAATTAGAATGCTCTCTGAGCTTTCTTCTCTCAACCTAGGATCAAACAATTTGAGTGGCGTAATTCCTCGAGATATTGGAGAGTGTAGAAACCTCCAGATATTGAATCTGAGTTCTAACTCTTTTGGTGCAAATATTCCCTCACAAATAGGAAATATACGCTCGCTTCAAAATCTTGATTTGAGTCATAATCAGTTGAGTGGTGAAGTTCCTCAAGAATTCGGGAAACTTGTTGTTTTAGAAACTCTAAGGCTTTCTAACAATAACATATCAGGTCTTTTGCCATCTACTCTTGAGAATTGTGTAAGTTTGACATCAATAGATATATCAAATAATGAGTTAGAAGGTCCATTGCCTAATATTCTAGCTTTTCGAAATGCTACATCCGATTTGGTGAAGAATAATAAAGGTCTTTGTGGACGAGATATTGATGGTCTAACTCCATGTTTTTCAAAAAATCAAAGGAAGAAAAGCTCAAAAAAAGTCGTGATATTGATCGCAGTGTTCGTAGGAATCTTTGTTGTGATTGTCGTCCTAGTTGGAATTTTTATGTGTGCCCGAAAAGGGAAAAAAACTATGAAAATTACGGAGGTGATTAATCCAATAGATGATTTGCTTTCAATTTGGAGCTTTGATGGGAAAATGGTCTATGAGAATATTATTGAAGCAACTGGAGACTTCAATTCTCAATATTGCATCGGGCAGGGAGGATATGGAAGTGTTTATAGGGCCGAGTTATCAACTGGTCAAGTTGTTGCAGTGAAAAGACTCCACAACTCAGAAGATGTTTTGAGGTCGTCTAAAATAGAGAAAAGCTTCATATCTGAAATTCAAGCACTAACTGAAATGCGACACCGTCACATTGTGAGGCTATTAGGATTTTGTTCACATGTTAGGAACTCATTTTTGGTTTATCAGTTTGTGGATGGAAGCAACCTTTCAAATATCTTGATGAATCATGAAAAAGTTCAAAACTTCAAATGGATTAATAGATTCAATGTTGTTAAAGGAGTGGCAGATGCATTATCCTACATGCATCATGAAGTATCACCTTCCTTGATTCACAGAGACATATCAAGCAAGAATATCATGTTAGATGAGAATTTTGAAGCTCATGTAACAGACTTTGGCACTGCAAGATTCTTGAGTCACAATTCATCTTATCAGACTTCATTTGCCGGAACATTCGGATACACAGCTCCAGAACTTGCTTATACTGAGGAGGTAAACGAGAAGTGTGATGTGTACAGTTTCGGGGTGCTAACATTAGAAGTGGTGATGGGGATGCATCCAGGTGATCTAATCTTATCGTCGATATTATCATCATCCGCCACTTCTTTGACGATTTTGCTAAAAGATGTAATCGACCAACGTGTTTCACCTCCTGTCATGGATGAGATAGACAAGGTAATTCTCATGACAAAGTTGGCATTTGCTTGTCTGCAACAAAATCCTCAATCTCGCCCGACAATGCATGATGTTTCTAATCAACTAGCAGCAAAATTGAAGCCAAACAAAGCTGCAGGGGTCGAGTTTTCATCCATCAAAATTGGTGAACTGCTTCCAATCGGGTGTTTGTTCCATGTTTAG 3258 0.372 MMKPLINFKTILILFFFISLHNHLQAYDPGFPLVGTTATQYNIPTNIALQETGDDDASSELDALLTWKGSLDKQSQHMLASWQPNHPPCGGNWSGISCNEAQRVETIYLDSYGLRGTLHDFTFSSFKHLTEISLGNNSLYGTIPSNISMLSKLVYLDLQYNNFSGSIPLSTCLLTNLEILSLYHNNISGTIPKQIGNSLVKLTFLDLSRNTLTGVVPDSIGNLTELITLTLSYNQLFGFIPSSIGNLIKLEKLQLYGNQLNGSIPQSIGRLTSLVILGLSINNLSGPIPSSIGNLVKLETLYLYENELSGSIPNTIGRLTSLVDLEISVNNLSGPIPSSIGNLVKLQILYLNQNQLSGSIPSSFGSLVELEKLQLDLNQLSGSVPKQFNNLIHFKHLQLSNNNLSGSLPDNICLGGQLTNFAANQNQFTGRLPMSLKNCTTLKRVRVEMNQLSGDLSIDLGGIYPHLNYIDLSHNNFYGTLPSKWGQCKNLTSLKISNNKVGGRLPENLGEASQIHMLDLGSNKLLGEIPISIFRNMTSLFNLNLEGNMLSGVIPNEIRMLSELSSLNLGSNNLSGVIPRDIGECRNLQILNLSSNSFGANIPSQIGNIRSLQNLDLSHNQLSGEVPQEFGKLVVLETLRLSNNNISGLLPSTLENCVSLTSIDISNNELEGPLPNILAFRNATSDLVKNNKGLCGRDIDGLTPCFSKNQRKKSSKKVVILIAVFVGIFVVIVVLVGIFMCARKGKKTMKITEVINPIDDLLSIWSFDGKMVYENIIEATGDFNSQYCIGQGGYGSVYRAELSTGQVVAVKRLHNSEDVLRSSKIEKSFISEIQALTEMRHRHIVRLLGFCSHVRNSFLVYQFVDGSNLSNILMNHEKVQNFKWINRFNVVKGVADALSYMHHEVSPSLIHRDISSKNIMLDENFEAHVTDFGTARFLSHNSSYQTSFAGTFGYTAPELAYTEEVNEKCDVYSFGVLTLEVVMGMHPGDLILSSILSSSATSLTILLKDVIDQRVSPPVMDEIDKVILMTKLAFACLQQNPQSRPTMHDVSNQLAAKLKPNKAAGVEFSSIKIGELLPIGCLFHV* 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0065 1085 PRINTS Leucine-rich repeat signature 202 215 - -
Tpr5g0065 1085 PRINTS Leucine-rich repeat signature 609 622 - -
Tpr5g0065 1085 ProSitePatterns Protein kinases ATP-binding region signature. 789 811 IPR017441 GO:0005524
Tpr5g0065 1085 Gene3D Ribonuclease Inhibitor 390 462 IPR032675 -
Tpr5g0065 1085 SUPERFAMILY Protein kinase-like (PK-like) 767 1054 IPR011009 -
Tpr5g0065 1085 Gene3D Ribonuclease Inhibitor 287 389 IPR032675 -
Tpr5g0065 1085 ProSitePatterns Tyrosine protein kinases specific active-site signature. 909 921 IPR008266 GO:0004672|GO:0006468
Tpr5g0065 1085 SMART LRR_typ_2 126 150 IPR003591 -
Tpr5g0065 1085 SMART LRR_typ_2 223 246 IPR003591 -
Tpr5g0065 1085 SMART LRR_typ_2 633 656 IPR003591 -
Tpr5g0065 1085 SMART LRR_typ_2 199 222 IPR003591 -
Tpr5g0065 1085 SMART LRR_typ_2 174 198 IPR003591 -
Tpr5g0065 1085 SMART LRR_typ_2 367 390 IPR003591 -
Tpr5g0065 1085 SMART LRR_typ_2 247 271 IPR003591 -
Tpr5g0065 1085 SMART LRR_typ_2 561 585 IPR003591 -
Tpr5g0065 1085 SMART LRR_typ_2 609 632 IPR003591 -
Tpr5g0065 1085 SMART LRR_typ_2 391 415 IPR003591 -
Tpr5g0065 1085 SMART LRR_typ_2 343 366 IPR003591 -
Tpr5g0065 1085 SMART LRR_typ_2 295 319 IPR003591 -
Tpr5g0065 1085 Gene3D Phosphorylase Kinase; domain 1 750 863 - -
Tpr5g0065 1085 Gene3D Ribonuclease Inhibitor 56 198 IPR032675 -
Tpr5g0065 1085 Pfam Leucine rich repeat 175 236 IPR001611 GO:0005515
Tpr5g0065 1085 Pfam Leucine rich repeat 610 670 IPR001611 GO:0005515
Tpr5g0065 1085 Pfam Leucine rich repeat 514 574 IPR001611 GO:0005515
Tpr5g0065 1085 Gene3D Ribonuclease Inhibitor 463 560 IPR032675 -
Tpr5g0065 1085 Gene3D Ribonuclease Inhibitor 561 704 IPR032675 -
Tpr5g0065 1085 Gene3D Ribonuclease Inhibitor 199 286 IPR032675 -
Tpr5g0065 1085 SUPERFAMILY L domain-like 463 696 - -
Tpr5g0065 1085 Pfam Leucine Rich Repeat 345 367 IPR001611 GO:0005515
Tpr5g0065 1085 Gene3D Transferase(Phosphotransferase) domain 1 865 1069 - -
Tpr5g0065 1085 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 150 1070 - -
Tpr5g0065 1085 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 54 152 - -
Tpr5g0065 1085 SUPERFAMILY RNI-like 107 473 - -
Tpr5g0065 1085 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 54 152 - -
Tpr5g0065 1085 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 150 1070 - -
Tpr5g0065 1085 Pfam Protein kinase domain 787 1052 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0065 1085 ProSiteProfiles Protein kinase domain profile. 783 1058 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0065 1085 Pfam Leucine rich repeat N-terminal domain 58 99 IPR013210 -
Tpr5g0065 1085 SMART LRR_sd22_2 150 171 - -
Tpr5g0065 1085 SMART LRR_sd22_2 343 372 - -
Tpr5g0065 1085 SMART LRR_sd22_2 199 225 - -
Tpr5g0065 1085 SMART LRR_sd22_2 174 189 - -
Tpr5g0065 1085 SMART LRR_sd22_2 488 511 - -
Tpr5g0065 1085 SMART LRR_sd22_2 295 327 - -
Tpr5g0065 1085 SMART LRR_sd22_2 126 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0065 Tpr-Chr5 1052791 1058049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0065 60 957 Receptor kinase-like Gene Family AT4G08850 43.377 0.0 713
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr5g0065 Pkinase 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0065 - - vvi:100262220 927.161